RNA–Protein interactions for RNA: ENST00000547615.1

PTCH1-214, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 525 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-214ENST00000547615 COPS9Q8WXC6 57 aa4.28□□□□□ -1.72
PTCH1-214ENST00000547615 COL5A1-AS1Q5SY13 56 aa4.27□□□□□ -1.73
PTCH1-214ENST00000547615 SVIPQ8NHG7 77 aa4.27□□□□□ -1.73
PTCH1-214ENST00000547615 MACF1Q9UPN3 7388 aaKnown RBP4.26□□□□□ -1.73
PTCH1-214ENST00000547615 IGLV5-48A0A075B6I7 105 aa4.26□□□□□ -1.73
PTCH1-214ENST00000547615 DPM2O94777 84 aa4.26□□□□□ -1.73
PTCH1-214ENST00000547615 LEPROTL1O95214 131 aa4.26□□□□□ -1.73
PTCH1-214ENST00000547615 TSPEAR-AS2P59090 65 aa4.26□□□□□ -1.73
PTCH1-214ENST00000547615 PCP2Q8IVA1 136 aa4.26□□□□□ -1.73
PTCH1-214ENST00000547615 DEFB105AQ8NG35 78 aa4.26□□□□□ -1.73
PTCH1-214ENST00000547615 KRTAP9-8Q9BYQ0 159 aa4.26□□□□□ -1.73
PTCH1-214ENST00000547615 A0A0J9YXY3 114 aa4.25□□□□□ -1.73
PTCH1-214ENST00000547615 H0Y8G0 127 aa4.25□□□□□ -1.73
PTCH1-214ENST00000547615 TIMM17BO60830 172 aa4.25□□□□□ -1.73
PTCH1-214ENST00000547615 IGKCP01834 107 aa4.25□□□□□ -1.73
PTCH1-214ENST00000547615 HSPB8Q9UJY1 196 aa4.25□□□□□ -1.73
PTCH1-214ENST00000547615 NPC2P61916 151 aa4.24□□□□□ -1.73
PTCH1-214ENST00000547615 UBE2V1Q13404 147 aa4.24□□□□□ -1.73
PTCH1-214ENST00000547615 Q6JHZ5 121 aa4.24□□□□□ -1.73
PTCH1-214ENST00000547615 SCGB1D1O95968 90 aa4.23□□□□□ -1.73
PTCH1-214ENST00000547615 SOSTDC1Q6X4U4 206 aa4.23□□□□□ -1.73
PTCH1-214ENST00000547615 KRTAP19-1Q8IUB9 90 aa4.23□□□□□ -1.73
PTCH1-214ENST00000547615 LINC00308Q8TCZ7 52 aa4.23□□□□□ -1.73
PTCH1-214ENST00000547615 SSPOA2VEC9 5147 aa4.23□□□□□ -1.73
PTCH1-214ENST00000547615 USH2AO75445 5202 aa4.22□□□□□ -1.73
PTCH1-214ENST00000547615 E9PLD3 99 aa4.22□□□□□ -1.73
PTCH1-214ENST00000547615 CLEC2BQ92478 149 aa4.22□□□□□ -1.73
PTCH1-214ENST00000547615 OBSCN-AS1Q96MR7 158 aa4.22□□□□□ -1.73
PTCH1-214ENST00000547615 UQCR10Q9UDW1 63 aa4.22□□□□□ -1.73
PTCH1-214ENST00000547615 TRAV13-2A0A0B4J235 113 aa4.21□□□□□ -1.74
PTCH1-214ENST00000547615 PET117Q6UWS5 81 aa4.21□□□□□ -1.74
PTCH1-214ENST00000547615 SS18L2Q9UHA2 77 aa4.21□□□□□ -1.74
PTCH1-214ENST00000547615 SYNE2Q8WXH0 6885 aaKnown RBP4.2□□□□□ -1.74
PTCH1-214ENST00000547615 FAM236DA0A1B0GTK5 79 aa4.2□□□□□ -1.74
PTCH1-214ENST00000547615 HSBP1L1C9JCN9 74 aa4.2□□□□□ -1.74
PTCH1-214ENST00000547615 FAM236CP0DP71 79 aa4.2□□□□□ -1.74
PTCH1-214ENST00000547615 LINC00310P59036 64 aa4.2□□□□□ -1.74
PTCH1-214ENST00000547615 ADAMTSL4-AS1Q5T5F5 129 aa4.2□□□□□ -1.74
PTCH1-214ENST00000547615 VAMP8Q9BV40 100 aa4.2□□□□□ -1.74
PTCH1-214ENST00000547615 RBM12B-AS1Q9P1G2 102 aa4.2□□□□□ -1.74
PTCH1-214ENST00000547615 FCGBPQ9Y6R7 5405 aaPredicted RBP4.2□□□□□ -1.74
PTCH1-214ENST00000547615 TRBV7-7A0A0K0K1E9 115 aa4.19□□□□□ -1.74
PTCH1-214ENST00000547615 H3BS24 57 aa4.19□□□□□ -1.74
PTCH1-214ENST00000547615 LST1O00453 97 aa4.19□□□□□ -1.74
PTCH1-214ENST00000547615 C20orf166-AS1Q96NR2 134 aa4.19□□□□□ -1.74
PTCH1-214ENST00000547615 MT2AP02795 61 aa4.18□□□□□ -1.74
PTCH1-214ENST00000547615 VAMP3Q15836 100 aa4.18□□□□□ -1.74
PTCH1-214ENST00000547615 Q6ZVH6 145 aa4.18□□□□□ -1.74
PTCH1-214ENST00000547615 MTURNQ8N3F0 131 aa4.18□□□□□ -1.74
PTCH1-214ENST00000547615 Q96NJ1 140 aa4.18□□□□□ -1.74
PTCH1-214ENST00000547615 IFITM1P13164 125 aa4.17□□□□□ -1.74
PTCH1-214ENST00000547615 KRTAP10-10P60014 251 aa4.17□□□□□ -1.74
PTCH1-214ENST00000547615 IGFL1Q6UW32 110 aa4.17□□□□□ -1.74
PTCH1-214ENST00000547615 PPDPFLQ8WWR9 84 aa4.17□□□□□ -1.74
PTCH1-214ENST00000547615 LITAFQ99732 161 aa4.17□□□□□ -1.74
PTCH1-214ENST00000547615 A6NDN8 102 aa4.16□□□□□ -1.74
PTCH1-214ENST00000547615 A8MUU9 505 aa4.16□□□□□ -1.74
PTCH1-214ENST00000547615 SERF1AO75920 110 aa4.16□□□□□ -1.74
PTCH1-214ENST00000547615 SCGB1A1P11684 91 aa4.16□□□□□ -1.74
PTCH1-214ENST00000547615 SPATA45Q537H7 98 aa4.16□□□□□ -1.74
PTCH1-214ENST00000547615 OCIAD2Q56VL3 154 aa4.16□□□□□ -1.74
PTCH1-214ENST00000547615 PAM16Q9Y3D7 125 aa4.16□□□□□ -1.74
PTCH1-214ENST00000547615 K7ERU9 68 aa4.14□□□□□ -1.75
PTCH1-214ENST00000547615 C3orf79P0CE67 100 aa4.14□□□□□ -1.75
PTCH1-214ENST00000547615 KRTAP19-6Q3LI70 58 aa4.14□□□□□ -1.75
PTCH1-214ENST00000547615 SCGB1D4Q6XE38 83 aa4.14□□□□□ -1.75
PTCH1-214ENST00000547615 KRTAP9-3Q9BYQ3 159 aa4.14□□□□□ -1.75
PTCH1-214ENST00000547615 TAX1BP3O14907 124 aa4.13□□□□□ -1.75
PTCH1-214ENST00000547615 KRTAP6-3Q3LI67 103 aa4.13□□□□□ -1.75
PTCH1-214ENST00000547615 PMCHL2Q9BQD1 86 aa4.13□□□□□ -1.75
PTCH1-214ENST00000547615 A0A0G2JQZ4 141 aa4.12□□□□□ -1.75
PTCH1-214ENST00000547615 MT1FP04733 61 aa4.12□□□□□ -1.75
PTCH1-214ENST00000547615 BATFQ16520 125 aa4.12□□□□□ -1.75
PTCH1-214ENST00000547615 BVES-AS1Q5T3Y7 98 aa4.12□□□□□ -1.75
PTCH1-214ENST00000547615 hADV29S1A0JD25 119 aa4.11□□□□□ -1.75
PTCH1-214ENST00000547615 KRTDAPP60985 99 aa4.11□□□□□ -1.75
PTCH1-214ENST00000547615 VPS25Q9BRG1 176 aa4.11□□□□□ -1.75
PTCH1-214ENST00000547615 SNCGO76070 127 aa4.1□□□□□ -1.75
PTCH1-214ENST00000547615 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.1□□□□□ -1.75
PTCH1-214ENST00000547615 Q6ZQY7 126 aa4.1□□□□□ -1.75
PTCH1-214ENST00000547615 SYS1-DBNDD2H3BUS1 97 aa4.09□□□□□ -1.75
PTCH1-214ENST00000547615 LINC00575Q6W349 94 aa4.09□□□□□ -1.75
PTCH1-214ENST00000547615 SMIM11BQ8TCY0 68 aa4.09□□□□□ -1.75
PTCH1-214ENST00000547615 A8MWP4 228 aa4.08□□□□□ -1.76
PTCH1-214ENST00000547615 LINC01545Q5VT33 79 aa4.08□□□□□ -1.76
PTCH1-214ENST00000547615 GTF2H5Q6ZYL4 71 aa4.08□□□□□ -1.76
PTCH1-214ENST00000547615 TEN1Q86WV5 123 aa4.08□□□□□ -1.76
PTCH1-214ENST00000547615 C9orf118A6NHY6 69 aa4.07□□□□□ -1.76
PTCH1-214ENST00000547615 K7EP34 96 aa4.06□□□□□ -1.76
PTCH1-214ENST00000547615 COX8AP10176 69 aa4.06□□□□□ -1.76
PTCH1-214ENST00000547615 MPLKIPQ8TAP9 179 aa4.06□□□□□ -1.76
PTCH1-214ENST00000547615 LINC00313P59037 77 aa4.05□□□□□ -1.76
PTCH1-214ENST00000547615 MUSTN1Q8IVN3 82 aa4.05□□□□□ -1.76
PTCH1-214ENST00000547615 HRES1P13985 223 aa4.04□□□□□ -1.76
PTCH1-214ENST00000547615 C2orf91Q6ZV80 131 aa4.04□□□□□ -1.76
PTCH1-214ENST00000547615 SIGMAR1Q99720 223 aa4.04□□□□□ -1.76
PTCH1-214ENST00000547615 A0A1B0GV72 72 aa4.03□□□□□ -1.76
PTCH1-214ENST00000547615 A0A087WSZ3 146 aa4.02□□□□□ -1.77
PTCH1-214ENST00000547615 F8W1H4 67 aa4.02□□□□□ -1.77
PTCH1-214ENST00000547615 HSD52Q0P140 79 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms