RNA–Protein interactions for RNA: ENST00000547427.5

RBFOX1-209, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 4

Gene RBFOX1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-209ENST00000547427 PRO1854Q9UHT4 67 aa13.57□□□□□ -0.24
RBFOX1-209ENST00000547427 SNCGO76070 127 aa13.56□□□□□ -0.24
RBFOX1-209ENST00000547427 HSD52Q0P140 79 aa13.56□□□□□ -0.24
RBFOX1-209ENST00000547427 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.56□□□□□ -0.24
RBFOX1-209ENST00000547427 RNF213Q63HN8 5207 aa13.55□□□□□ -0.24
RBFOX1-209ENST00000547427 CD164Q04900 197 aa13.55□□□□□ -0.24
RBFOX1-209ENST00000547427 UQCR10Q9UDW1 63 aa13.55□□□□□ -0.24
RBFOX1-209ENST00000547427 H0YGX0 51 aa13.54□□□□□ -0.24
RBFOX1-209ENST00000547427 A0A0G2JQZ4 141 aa13.5□□□□□ -0.25
RBFOX1-209ENST00000547427 KRTAP13-3Q3SY46 172 aa13.49□□□□□ -0.25
RBFOX1-209ENST00000547427 SNHG12Q9BXW3 62 aa13.49□□□□□ -0.25
RBFOX1-209ENST00000547427 PPDPFLQ8WWR9 84 aa13.48□□□□□ -0.25
RBFOX1-209ENST00000547427 OCIAD2Q56VL3 154 aa13.45□□□□□ -0.26
RBFOX1-209ENST00000547427 Q6JHZ5 121 aa13.44□□□□□ -0.26
RBFOX1-209ENST00000547427 FAM218AQ96MZ4 157 aa13.44□□□□□ -0.26
RBFOX1-209ENST00000547427 K7ERJ3 54 aa13.42□□□□□ -0.26
RBFOX1-209ENST00000547427 TRIAP1O43715 76 aa13.42□□□□□ -0.26
RBFOX1-209ENST00000547427 PSMB2P49721 201 aa13.42□□□□□ -0.26
RBFOX1-209ENST00000547427 IGLV8-61A0A075B6I0 122 aa13.4□□□□□ -0.26
RBFOX1-209ENST00000547427 A0A1B0GX51 115 aa13.4□□□□□ -0.26
RBFOX1-209ENST00000547427 Q5XG85 94 aa13.39□□□□□ -0.27
RBFOX1-209ENST00000547427 CLEC2BQ92478 149 aa13.39□□□□□ -0.27
RBFOX1-209ENST00000547427 TCL1BO95988 128 aa13.37□□□□□ -0.27
RBFOX1-209ENST00000547427 GHRHP01286 108 aa13.37□□□□□ -0.27
RBFOX1-209ENST00000547427 IGFL1Q6UW32 110 aa13.37□□□□□ -0.27
RBFOX1-209ENST00000547427 COX6CP09669 75 aa13.36□□□□□ -0.27
RBFOX1-209ENST00000547427 H3BUT2 72 aa13.34□□□□□ -0.27
RBFOX1-209ENST00000547427 DNAL4O96015 105 aa13.32□□□□□ -0.28
RBFOX1-209ENST00000547427 SMIM6P0DI80 62 aa13.32□□□□□ -0.28
RBFOX1-209ENST00000547427 FABP2P12104 132 aa13.32□□□□□ -0.28
RBFOX1-209ENST00000547427 NDUFV3P56181 108 aaKnown RBP13.32□□□□□ -0.28
RBFOX1-209ENST00000547427 C1orf195Q5TG92 126 aa13.31□□□□□ -0.28
RBFOX1-209ENST00000547427 TRBV7-7A0A0K0K1E9 115 aa13.29□□□□□ -0.28
RBFOX1-209ENST00000547427 C9orf92A6NGG3 77 aa13.27□□□□□ -0.29
RBFOX1-209ENST00000547427 XP32Q5T750 250 aa13.26□□□□□ -0.29
RBFOX1-209ENST00000547427 A0A0U1RQV1 116 aa13.25□□□□□ -0.29
RBFOX1-209ENST00000547427 H3BMG7 143 aa13.25□□□□□ -0.29
RBFOX1-209ENST00000547427 SEC61BP60468 96 aaKnown RBP13.25□□□□□ -0.29
RBFOX1-209ENST00000547427 ORMDL1Q9P0S3 153 aa13.25□□□□□ -0.29
RBFOX1-209ENST00000547427 SCGB1C2P0DMR2 95 aa13.24□□□□□ -0.29
RBFOX1-209ENST00000547427 ASB16-AS1Q495Z4 193 aa13.24□□□□□ -0.29
RBFOX1-209ENST00000547427 M0R143 59 aa13.23□□□□□ -0.29
RBFOX1-209ENST00000547427 MUC2Q02817 5179 aa13.23□□□□□ -0.29
RBFOX1-209ENST00000547427 H3BQ85 93 aa13.22□□□□□ -0.29
RBFOX1-209ENST00000547427 MUC17Q685J3 4493 aa13.21□□□□□ -0.29
RBFOX1-209ENST00000547427 TEN1Q86WV5 123 aa13.19□□□□□ -0.3
RBFOX1-209ENST00000547427 TSTD3H0UI37 97 aa13.17□□□□□ -0.3
RBFOX1-209ENST00000547427 TMEM256-PLSCR3K7ERE1 68 aa13.17□□□□□ -0.3
RBFOX1-209ENST00000547427 Q6Q795 121 aa13.17□□□□□ -0.3
RBFOX1-209ENST00000547427 SS18L2Q9UHA2 77 aa13.16□□□□□ -0.3
RBFOX1-209ENST00000547427 LST1O00453 97 aa13.14□□□□□ -0.31
RBFOX1-209ENST00000547427 TRACP01848 142 aa13.14□□□□□ -0.31
RBFOX1-209ENST00000547427 A0A1B0GV72 72 aa13.13□□□□□ -0.31
RBFOX1-209ENST00000547427 LOC105371267A0A1B0GV96 52 aa13.12□□□□□ -0.31
RBFOX1-209ENST00000547427 ANKRD29Q8N6D5 301 aa13.1□□□□□ -0.31
RBFOX1-209ENST00000547427 A0A087WSZ3 146 aa13.09□□□□□ -0.31
RBFOX1-209ENST00000547427 UBE2V1Q13404 147 aa13.07□□□□□ -0.32
RBFOX1-209ENST00000547427 NAA38Q9BRA0 125 aaKnown RBP13.06□□□□□ -0.32
RBFOX1-209ENST00000547427 A0A1W2PNM2 257 aa13.04□□□□□ -0.32
RBFOX1-209ENST00000547427 BATFQ16520 125 aa13.04□□□□□ -0.32
RBFOX1-209ENST00000547427 PCOTHQ58A44 107 aa13.03□□□□□ -0.32
RBFOX1-209ENST00000547427 BAALC-AS2P0C853 105 aa13.01□□□□□ -0.33
RBFOX1-209ENST00000547427 ATXN8Q156A1 80 aa13.01□□□□□ -0.33
RBFOX1-209ENST00000547427 KRTAP4-1Q9BYQ7 146 aa13.01□□□□□ -0.33
RBFOX1-209ENST00000547427 TRBV7-4A0A0J9YYF1 115 aa12.99□□□□□ -0.33
RBFOX1-209ENST00000547427 CCKP06307 115 aa12.98□□□□□ -0.33
RBFOX1-209ENST00000547427 RBM3P98179 157 aaKnown RBP12.97□□□□□ -0.33
RBFOX1-209ENST00000547427 RPL37P61927 97 aaKnown RBP12.96□□□□□ -0.33
RBFOX1-209ENST00000547427 LYRM7Q5U5X0 104 aa12.96□□□□□ -0.33
RBFOX1-209ENST00000547427 OBSCN-AS1Q96MR7 158 aa12.96□□□□□ -0.33
RBFOX1-209ENST00000547427 DSCR8Q96T75 97 aa12.95□□□□□ -0.34
RBFOX1-209ENST00000547427 VPS25Q9BRG1 176 aa12.94□□□□□ -0.34
RBFOX1-209ENST00000547427 Q96NJ1 140 aa12.92□□□□□ -0.34
RBFOX1-209ENST00000547427 SIGMAR1Q99720 223 aa12.9□□□□□ -0.34
RBFOX1-209ENST00000547427 FAT4Q6V0I7 4981 aa12.87□□□□□ -0.35
RBFOX1-209ENST00000547427 TRBV20-1A0A075B6N2 111 aa12.87□□□□□ -0.35
RBFOX1-209ENST00000547427 C9JAW5 83 aa12.87□□□□□ -0.35
RBFOX1-209ENST00000547427 IGKV4-1P06312 121 aa12.85□□□□□ -0.35
RBFOX1-209ENST00000547427 JMJD7-PLA2G4BH0Y9G9 81 aa12.83□□□□□ -0.36
RBFOX1-209ENST00000547427 C9orf118A6NHY6 69 aa12.82□□□□□ -0.36
RBFOX1-209ENST00000547427 DEFB116Q30KQ4 102 aa12.81□□□□□ -0.36
RBFOX1-209ENST00000547427 LCE2AQ5TA79 106 aaPredicted RBP12.81□□□□□ -0.36
RBFOX1-209ENST00000547427 Q75L30 129 aa12.81□□□□□ -0.36
RBFOX1-209ENST00000547427 ATP11AUNQ6ZP68 121 aa12.8□□□□□ -0.36
RBFOX1-209ENST00000547427 TAX1BP3O14907 124 aa12.79□□□□□ -0.36
RBFOX1-209ENST00000547427 DSCR10P59022 87 aa12.78□□□□□ -0.36
RBFOX1-209ENST00000547427 C21orf62-AS1Q17RA5 79 aa12.78□□□□□ -0.36
RBFOX1-209ENST00000547427 LINC00472Q9H8W2 130 aa12.78□□□□□ -0.36
RBFOX1-209ENST00000547427 A0A1W2PPM0 123 aa12.75□□□□□ -0.37
RBFOX1-209ENST00000547427 LINC00313P59037 77 aa12.74□□□□□ -0.37
RBFOX1-209ENST00000547427 PDE6GP18545 87 aa12.73□□□□□ -0.37
RBFOX1-209ENST00000547427 Q6ZQT0 140 aa12.73□□□□□ -0.37
RBFOX1-209ENST00000547427 LOC110117498A0A087WWA1 95 aa12.72□□□□□ -0.37
RBFOX1-209ENST00000547427 C14orf132Q9NPU4 83 aa12.72□□□□□ -0.37
RBFOX1-209ENST00000547427 C20orf166-AS1Q96NR2 134 aa12.71□□□□□ -0.37
RBFOX1-209ENST00000547427 IGHV6-1A0A0B4J1U7 121 aa12.69□□□□□ -0.38
RBFOX1-209ENST00000547427 A8MUU9 505 aa12.69□□□□□ -0.38
RBFOX1-209ENST00000547427 A0A1B0GW54 56 aa12.66□□□□□ -0.38
RBFOX1-209ENST00000547427 H3BT86 120 aa12.66□□□□□ -0.38
RBFOX1-209ENST00000547427 J3KT08 172 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms