RNA–Protein interactions for RNA: ENST00000547055.1

RAB3IP-209, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-209ENST00000547055 MRPL34Q9BQ48 92 aaKnown RBP1.34□□□□□ -2.19
RAB3IP-209ENST00000547055 CEP350Q5VT06 3117 aa1.34□□□□□ -2.2
RAB3IP-209ENST00000547055 C2CD3Q4AC94 2353 aa1.34□□□□□ -2.2
RAB3IP-209ENST00000547055 CENPFP49454 3210 aa1.34□□□□□ -2.2
RAB3IP-209ENST00000547055 EP300Q09472 2414 aaPredicted RBP1.34□□□□□ -2.2
RAB3IP-209ENST00000547055 MYO9AB2RTY4 2548 aa1.33□□□□□ -2.2
RAB3IP-209ENST00000547055 NCOR1O75376 2440 aa1.33□□□□□ -2.2
RAB3IP-209ENST00000547055 A0A1W2PNM2 257 aa1.33□□□□□ -2.2
RAB3IP-209ENST00000547055 A0A1W2PNN7 141 aa1.33□□□□□ -2.2
RAB3IP-209ENST00000547055 LY6G6CO95867 125 aa1.33□□□□□ -2.2
RAB3IP-209ENST00000547055 KRTAP6-3Q3LI67 103 aa1.33□□□□□ -2.2
RAB3IP-209ENST00000547055 LINC00472Q9H8W2 130 aa1.33□□□□□ -2.2
RAB3IP-209ENST00000547055 PSORS1C2Q9UIG4 136 aa1.33□□□□□ -2.2
RAB3IP-209ENST00000547055 CSPG4Q6UVK1 2322 aa1.33□□□□□ -2.2
RAB3IP-209ENST00000547055 NBEAQ8NFP9 2946 aa1.33□□□□□ -2.2
RAB3IP-209ENST00000547055 MED13LQ71F56 2210 aa1.32□□□□□ -2.2
RAB3IP-209ENST00000547055 PCNX1Q96RV3 2341 aa1.32□□□□□ -2.2
RAB3IP-209ENST00000547055 SSBP3-AS1Q7Z2R9 100 aa1.32□□□□□ -2.2
RAB3IP-209ENST00000547055 WFDC13Q8IUB5 93 aa1.32□□□□□ -2.2
RAB3IP-209ENST00000547055 LAMA2P24043 3122 aaKnown RBP1.32□□□□□ -2.2
RAB3IP-209ENST00000547055 FBN1P35555 2871 aaKnown RBP1.32□□□□□ -2.2
RAB3IP-209ENST00000547055 ZDBF2Q9HCK1 2354 aa1.32□□□□□ -2.2
RAB3IP-209ENST00000547055 KMT2BQ9UMN6 2715 aaPredicted RBP1.31□□□□□ -2.2
RAB3IP-209ENST00000547055 M0R2N4 97 aa1.31□□□□□ -2.2
RAB3IP-209ENST00000547055 C1orf134Q5TEV5 83 aa1.31□□□□□ -2.2
RAB3IP-209ENST00000547055 DEFB124Q8NES8 71 aa1.31□□□□□ -2.2
RAB3IP-209ENST00000547055 CRIPTQ9P021 101 aa1.31□□□□□ -2.2
RAB3IP-209ENST00000547055 CR1P17927 2039 aa1.31□□□□□ -2.2
RAB3IP-209ENST00000547055 RANBP2P49792 3224 aaKnown RBP1.31□□□□□ -2.2
RAB3IP-209ENST00000547055 FRYQ5TBA9 3013 aa1.3□□□□□ -2.2
RAB3IP-209ENST00000547055 MMP24-AS1A0A0U1RRL7 71 aa1.3□□□□□ -2.2
RAB3IP-209ENST00000547055 NUPR2A6NF83 97 aa1.3□□□□□ -2.2
RAB3IP-209ENST00000547055 CLPSL2Q6UWE3 100 aa1.3□□□□□ -2.2
RAB3IP-209ENST00000547055 DEFB104AQ8WTQ1 72 aa1.3□□□□□ -2.2
RAB3IP-209ENST00000547055 PRO3102Q9H379 93 aa1.3□□□□□ -2.2
RAB3IP-209ENST00000547055 TLN1Q9Y490 2541 aaKnown RBP1.3□□□□□ -2.2
RAB3IP-209ENST00000547055 CHD9Q3L8U1 2897 aa1.29□□□□□ -2.2
RAB3IP-209ENST00000547055 UTRNP46939 3433 aa1.29□□□□□ -2.2
RAB3IP-209ENST00000547055 MAP1AP78559 2803 aaPredicted RBP1.29□□□□□ -2.2
RAB3IP-209ENST00000547055 A0A096LPF7 62 aa1.29□□□□□ -2.2
RAB3IP-209ENST00000547055 ZZEF1O43149 2961 aa1.29□□□□□ -2.2
RAB3IP-209ENST00000547055 SPINK7P58062 85 aa1.29□□□□□ -2.2
RAB3IP-209ENST00000547055 DEFB1P60022 68 aa1.29□□□□□ -2.2
RAB3IP-209ENST00000547055 C20orf166-AS1Q96NR2 134 aa1.29□□□□□ -2.2
RAB3IP-209ENST00000547055 NBASA2RRP1 2371 aa1.29□□□□□ -2.2
RAB3IP-209ENST00000547055 SPG11Q96JI7 2443 aa1.29□□□□□ -2.2
RAB3IP-209ENST00000547055 TLN2Q9Y4G6 2542 aa1.29□□□□□ -2.2
RAB3IP-209ENST00000547055 CHD7Q9P2D1 2997 aa1.29□□□□□ -2.2
RAB3IP-209ENST00000547055 GVINP1Q7Z2Y8 2422 aa1.28□□□□□ -2.2
RAB3IP-209ENST00000547055 RPS29P62273 56 aaKnown RBP1.28□□□□□ -2.2
RAB3IP-209ENST00000547055 PRB3Q04118 309 aaPredicted RBP1.28□□□□□ -2.2
RAB3IP-209ENST00000547055 PCOTHQ58A44 107 aa1.28□□□□□ -2.2
RAB3IP-209ENST00000547055 CSAG1Q6PB30 78 aa1.28□□□□□ -2.2
RAB3IP-209ENST00000547055 Q8NDZ9 215 aa1.28□□□□□ -2.2
RAB3IP-209ENST00000547055 RIF1Q5UIP0 2472 aaKnown RBP1.28□□□□□ -2.2
RAB3IP-209ENST00000547055 KALRNO60229 2985 aa1.27□□□□□ -2.21
RAB3IP-209ENST00000547055 DSPP15924 2871 aaKnown RBP1.27□□□□□ -2.21
RAB3IP-209ENST00000547055 CFAP54Q96N23 3096 aa1.27□□□□□ -2.21
RAB3IP-209ENST00000547055 TACC2O95359 2948 aa1.27□□□□□ -2.21
RAB3IP-209ENST00000547055 FRYLO94915 3013 aa1.26□□□□□ -2.21
RAB3IP-209ENST00000547055 MGAQ8IWI9 3026 aa1.26□□□□□ -2.21
RAB3IP-209ENST00000547055 PRB4P10163 310 aaPredicted RBP1.26□□□□□ -2.21
RAB3IP-209ENST00000547055 RPL37P61927 97 aaKnown RBP1.26□□□□□ -2.21
RAB3IP-209ENST00000547055 DEFB136Q30KP8 78 aa1.26□□□□□ -2.21
RAB3IP-209ENST00000547055 KRTAP26-1Q6PEX3 210 aa1.26□□□□□ -2.21
RAB3IP-209ENST00000547055 DEFB123Q8N688 67 aa1.26□□□□□ -2.21
RAB3IP-209ENST00000547055 CEP295Q9C0D2 2601 aa1.26□□□□□ -2.21
RAB3IP-209ENST00000547055 NCOR2Q9Y618 2525 aa1.26□□□□□ -2.21
RAB3IP-209ENST00000547055 HTTP42858 3142 aa1.26□□□□□ -2.21
RAB3IP-209ENST00000547055 TRIOO75962 3097 aa1.26□□□□□ -2.21
RAB3IP-209ENST00000547055 OTOGLQ3ZCN5 2332 aa1.26□□□□□ -2.21
RAB3IP-209ENST00000547055 VPS13AQ96RL7 3174 aa1.25□□□□□ -2.21
RAB3IP-209ENST00000547055 SPINK1P00995 79 aa1.25□□□□□ -2.21
RAB3IP-209ENST00000547055 HTN3P15516 51 aa1.25□□□□□ -2.21
RAB3IP-209ENST00000547055 DEFB135Q30KP9 77 aa1.25□□□□□ -2.21
RAB3IP-209ENST00000547055 ANKRD11Q6UB99 2663 aaPredicted RBP1.25□□□□□ -2.21
RAB3IP-209ENST00000547055 ANKRD17O75179 2603 aaKnown RBP1.25□□□□□ -2.21
RAB3IP-209ENST00000547055 USP9YO00507 2555 aaPredicted RBP1.25□□□□□ -2.21
RAB3IP-209ENST00000547055 USP9XQ93008 2570 aaPredicted RBP1.25□□□□□ -2.21
RAB3IP-209ENST00000547055 ACACBO00763 2458 aa1.25□□□□□ -2.21
RAB3IP-209ENST00000547055 AKAP13Q12802 2813 aa1.25□□□□□ -2.21
RAB3IP-209ENST00000547055 ZFHX3Q15911 3703 aa1.24□□□□□ -2.21
RAB3IP-209ENST00000547055 NAV2Q8IVL1 2488 aa1.24□□□□□ -2.21
RAB3IP-209ENST00000547055 A0A0G2JQZ4 141 aa1.24□□□□□ -2.21
RAB3IP-209ENST00000547055 LAMA1P25391 3075 aa1.24□□□□□ -2.21
RAB3IP-209ENST00000547055 DOPEY1Q5JWR5 2465 aa1.24□□□□□ -2.21
RAB3IP-209ENST00000547055 HIVEP3Q5T1R4 2406 aa1.24□□□□□ -2.21
RAB3IP-209ENST00000547055 ABCA2Q9BZC7 2435 aa1.24□□□□□ -2.21
RAB3IP-209ENST00000547055 BDP1A6H8Y1 2624 aa1.23□□□□□ -2.21
RAB3IP-209ENST00000547055 VCANP13611 3396 aa1.23□□□□□ -2.21
RAB3IP-209ENST00000547055 ADGRG4Q8IZF6 3080 aa1.23□□□□□ -2.21
RAB3IP-209ENST00000547055 SONP18583 2426 aaKnown RBP1.23□□□□□ -2.21
RAB3IP-209ENST00000547055 H1FX-AS1Q4G0G2 97 aa1.23□□□□□ -2.21
RAB3IP-209ENST00000547055 UTP20O75691 2785 aaKnown RBP1.23□□□□□ -2.21
RAB3IP-209ENST00000547055 FREM2Q5SZK8 3169 aa1.22□□□□□ -2.21
RAB3IP-209ENST00000547055 C5orf42Q9H799 3197 aa1.22□□□□□ -2.21
RAB3IP-209ENST00000547055 ITPR1Q14643 2758 aa1.22□□□□□ -2.21
RAB3IP-209ENST00000547055 CACNA1AO00555 2505 aa1.22□□□□□ -2.21
RAB3IP-209ENST00000547055 CHD6Q8TD26 2715 aa1.22□□□□□ -2.21
RAB3IP-209ENST00000547055 M0QZ58 72 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms