RNA–Protein interactions for RNA: ENST00000546603.5

CPNE8-204, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 1,036 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-204ENST00000546603 ACACAQ13085 2346 aa2.04□□□□□ -2.08
CPNE8-204ENST00000546603 SPTAN1Q13813 2472 aaKnown RBP2.04□□□□□ -2.08
CPNE8-204ENST00000546603 LINC01554Q52M75 96 aa2.04□□□□□ -2.08
CPNE8-204ENST00000546603 SPAG11AQ6PDA7 123 aa2.04□□□□□ -2.08
CPNE8-204ENST00000546603 SPRR4Q96PI1 79 aa2.04□□□□□ -2.08
CPNE8-204ENST00000546603 BAHCC1Q9P281 2608 aa2.04□□□□□ -2.08
CPNE8-204ENST00000546603 LINC01558Q9Y6Z2 57 aa2.04□□□□□ -2.08
CPNE8-204ENST00000546603 UTRNP46939 3433 aa2.04□□□□□ -2.08
CPNE8-204ENST00000546603 SPTA1P02549 2419 aa2.03□□□□□ -2.08
CPNE8-204ENST00000546603 A0A1W2PNM2 257 aa2.03□□□□□ -2.08
CPNE8-204ENST00000546603 IGLV1-51P01701 117 aa2.03□□□□□ -2.08
CPNE8-204ENST00000546603 NBEAQ8NFP9 2946 aa2.03□□□□□ -2.08
CPNE8-204ENST00000546603 ACYP2P14621 99 aa2.02□□□□□ -2.09
CPNE8-204ENST00000546603 Q8NDZ9 215 aa2.02□□□□□ -2.09
CPNE8-204ENST00000546603 CREBBPQ92793 2442 aa2.01□□□□□ -2.09
CPNE8-204ENST00000546603 A0A087WSZ3 146 aa2.01□□□□□ -2.09
CPNE8-204ENST00000546603 DEFB131BA0A096LNP1 70 aa2.01□□□□□ -2.09
CPNE8-204ENST00000546603 A0A1B0GU33 70 aa2.01□□□□□ -2.09
CPNE8-204ENST00000546603 A0A1B0GU69 56 aa2.01□□□□□ -2.09
CPNE8-204ENST00000546603 H3BNG1 76 aa2.01□□□□□ -2.09
CPNE8-204ENST00000546603 DSPP15924 2871 aaKnown RBP2.01□□□□□ -2.09
CPNE8-204ENST00000546603 WNK1Q9H4A3 2382 aa2□□□□□ -2.09
CPNE8-204ENST00000546603 DEFB135Q30KP9 77 aa2□□□□□ -2.09
CPNE8-204ENST00000546603 PCOTHQ58A44 107 aa2□□□□□ -2.09
CPNE8-204ENST00000546603 C9orf163Q8N9P6 203 aa2□□□□□ -2.09
CPNE8-204ENST00000546603 PRO3102Q9H379 93 aa2□□□□□ -2.09
CPNE8-204ENST00000546603 UQCR11O14957 56 aa1.99□□□□□ -2.09
CPNE8-204ENST00000546603 ABCA2Q9BZC7 2435 aa1.99□□□□□ -2.09
CPNE8-204ENST00000546603 LAMA2P24043 3122 aaKnown RBP1.99□□□□□ -2.09
CPNE8-204ENST00000546603 TNRC18O15417 2968 aaPredicted RBP1.98□□□□□ -2.09
CPNE8-204ENST00000546603 ZZEF1O43149 2961 aa1.98□□□□□ -2.09
CPNE8-204ENST00000546603 DEFB4AO15263 64 aa1.98□□□□□ -2.09
CPNE8-204ENST00000546603 RPL37AP61513 92 aaKnown RBP1.98□□□□□ -2.09
CPNE8-204ENST00000546603 CNBPP62633 177 aaKnown RBP1.98□□□□□ -2.09
CPNE8-204ENST00000546603 MIR22HGQ0VDD5 57 aa1.98□□□□□ -2.09
CPNE8-204ENST00000546603 LAMA1P25391 3075 aa1.98□□□□□ -2.09
CPNE8-204ENST00000546603 FRYQ5TBA9 3013 aa1.98□□□□□ -2.09
CPNE8-204ENST00000546603 RANBP2P49792 3224 aaKnown RBP1.98□□□□□ -2.09
CPNE8-204ENST00000546603 C2CD3Q4AC94 2353 aa1.98□□□□□ -2.09
CPNE8-204ENST00000546603 ANKRD11Q6UB99 2663 aaPredicted RBP1.97□□□□□ -2.09
CPNE8-204ENST00000546603 CR1P17927 2039 aa1.97□□□□□ -2.09
CPNE8-204ENST00000546603 SPRR1AP35321 89 aa1.97□□□□□ -2.09
CPNE8-204ENST00000546603 SPINK7P58062 85 aa1.97□□□□□ -2.09
CPNE8-204ENST00000546603 DEFB113Q30KQ7 82 aa1.97□□□□□ -2.09
CPNE8-204ENST00000546603 LINC01556Q5JQF7 62 aa1.97□□□□□ -2.09
CPNE8-204ENST00000546603 MKI67P46013 3256 aaKnown RBP1.97□□□□□ -2.09
CPNE8-204ENST00000546603 UNC80Q8N2C7 3258 aa1.97□□□□□ -2.09
CPNE8-204ENST00000546603 TACC2O95359 2948 aa1.96□□□□□ -2.1
CPNE8-204ENST00000546603 SPG11Q96JI7 2443 aa1.96□□□□□ -2.1
CPNE8-204ENST00000546603 TLN1Q9Y490 2541 aaKnown RBP1.96□□□□□ -2.1
CPNE8-204ENST00000546603 CFAP54Q96N23 3096 aa1.96□□□□□ -2.1
CPNE8-204ENST00000546603 GVINP1Q7Z2Y8 2422 aa1.96□□□□□ -2.1
CPNE8-204ENST00000546603 REV3LO60673 3130 aa1.95□□□□□ -2.1
CPNE8-204ENST00000546603 TRIOO75962 3097 aa1.95□□□□□ -2.1
CPNE8-204ENST00000546603 CSPG4Q6UVK1 2322 aa1.95□□□□□ -2.1
CPNE8-204ENST00000546603 BRCA2P51587 3418 aa1.95□□□□□ -2.1
CPNE8-204ENST00000546603 SPATA8Q6RVD6 105 aa1.95□□□□□ -2.1
CPNE8-204ENST00000546603 MRPL34Q9BQ48 92 aaKnown RBP1.95□□□□□ -2.1
CPNE8-204ENST00000546603 LINC00472Q9H8W2 130 aa1.95□□□□□ -2.1
CPNE8-204ENST00000546603 PLAC8Q9NZF1 115 aa1.95□□□□□ -2.1
CPNE8-204ENST00000546603 MMP24-AS1A0A0U1RRL7 71 aa1.94□□□□□ -2.1
CPNE8-204ENST00000546603 PRLHP81277 87 aa1.94□□□□□ -2.1
CPNE8-204ENST00000546603 NCOR2Q9Y618 2525 aa1.94□□□□□ -2.1
CPNE8-204ENST00000546603 MAP1AP78559 2803 aaPredicted RBP1.94□□□□□ -2.1
CPNE8-204ENST00000546603 TLN2Q9Y4G6 2542 aa1.93□□□□□ -2.1
CPNE8-204ENST00000546603 BDP1A6H8Y1 2624 aa1.93□□□□□ -2.1
CPNE8-204ENST00000546603 ANKRD17O75179 2603 aaKnown RBP1.93□□□□□ -2.1
CPNE8-204ENST00000546603 KALRNO60229 2985 aa1.93□□□□□ -2.1
CPNE8-204ENST00000546603 NBASA2RRP1 2371 aa1.93□□□□□ -2.1
CPNE8-204ENST00000546603 AKAP13Q12802 2813 aa1.93□□□□□ -2.1
CPNE8-204ENST00000546603 A0A096LNI7 61 aa1.93□□□□□ -2.1
CPNE8-204ENST00000546603 SPRR1BP22528 89 aa1.93□□□□□ -2.1
CPNE8-204ENST00000546603 CSAG1Q6PB30 78 aa1.93□□□□□ -2.1
CPNE8-204ENST00000546603 C20orf166-AS1Q96NR2 134 aa1.93□□□□□ -2.1
CPNE8-204ENST00000546603 DNAH14Q0VDD8 3507 aa1.93□□□□□ -2.1
CPNE8-204ENST00000546603 XIRP2A4UGR9 3374 aa1.93□□□□□ -2.1
CPNE8-204ENST00000546603 MGAQ8IWI9 3026 aa1.93□□□□□ -2.1
CPNE8-204ENST00000546603 HIVEP3Q5T1R4 2406 aa1.92□□□□□ -2.1
CPNE8-204ENST00000546603 MYO9AB2RTY4 2548 aa1.92□□□□□ -2.1
CPNE8-204ENST00000546603 LRBAP50851 2863 aa1.92□□□□□ -2.1
CPNE8-204ENST00000546603 KRTAP12-1P59990 96 aa1.92□□□□□ -2.1
CPNE8-204ENST00000546603 C1orf134Q5TEV5 83 aa1.92□□□□□ -2.1
CPNE8-204ENST00000546603 KRTAP26-1Q6PEX3 210 aa1.92□□□□□ -2.1
CPNE8-204ENST00000546603 FCGBPQ9Y6R7 5405 aaPredicted RBP1.92□□□□□ -2.1
CPNE8-204ENST00000546603 SZT2Q5T011 3432 aa1.91□□□□□ -2.1
CPNE8-204ENST00000546603 COL6A3P12111 3177 aa1.91□□□□□ -2.1
CPNE8-204ENST00000546603 A0A0G2JQZ4 141 aa1.91□□□□□ -2.1
CPNE8-204ENST00000546603 UBE2DNLQ8IWF7 75 aa1.91□□□□□ -2.1
CPNE8-204ENST00000546603 DMAC1Q96GE9 116 aa1.91□□□□□ -2.1
CPNE8-204ENST00000546603 FRYLO94915 3013 aa1.91□□□□□ -2.1
CPNE8-204ENST00000546603 CEP295Q9C0D2 2601 aa1.91□□□□□ -2.1
CPNE8-204ENST00000546603 HRNRQ86YZ3 2850 aaPredicted RBP1.91□□□□□ -2.1
CPNE8-204ENST00000546603 VPS13AQ96RL7 3174 aa1.9□□□□□ -2.1
CPNE8-204ENST00000546603 ZFHX2Q9C0A1 2572 aaPredicted RBP1.9□□□□□ -2.11
CPNE8-204ENST00000546603 HMCN1Q96RW7 5635 aa1.9□□□□□ -2.11
CPNE8-204ENST00000546603 RIF1Q5UIP0 2472 aaKnown RBP1.9□□□□□ -2.11
CPNE8-204ENST00000546603 SPINK6Q6UWN8 80 aa1.89□□□□□ -2.11
CPNE8-204ENST00000546603 CHD6Q8TD26 2715 aa1.89□□□□□ -2.11
CPNE8-204ENST00000546603 JMJD1CQ15652 2540 aa1.88□□□□□ -2.11
CPNE8-204ENST00000546603 TENM1Q9UKZ4 2725 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms