RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 EYSQ5T1H1 3165 aa7.7□□□□□ -1.18
NPC1L1-204ENST00000546276 CELSR3Q9NYQ7 3312 aa7.69□□□□□ -1.18
NPC1L1-204ENST00000546276 IGLV7-46A0A075B6I9 117 aa7.69□□□□□ -1.18
NPC1L1-204ENST00000546276 APLNQ9ULZ1 77 aa7.68□□□□□ -1.18
NPC1L1-204ENST00000546276 IGSF10Q6WRI0 2623 aa7.68□□□□□ -1.18
NPC1L1-204ENST00000546276 IGLV7-43P04211 117 aa7.68□□□□□ -1.18
NPC1L1-204ENST00000546276 FRYQ5TBA9 3013 aa7.66□□□□□ -1.18
NPC1L1-204ENST00000546276 SPTBN5Q9NRC6 3674 aaKnown RBP7.66□□□□□ -1.18
NPC1L1-204ENST00000546276 MYO15AQ9UKN7 3530 aa7.65□□□□□ -1.18
NPC1L1-204ENST00000546276 PRR26Q8N8Z3 221 aa7.65□□□□□ -1.18
NPC1L1-204ENST00000546276 Q75L30 129 aa7.64□□□□□ -1.19
NPC1L1-204ENST00000546276 Q8N9P0 234 aaPredicted RBP7.64□□□□□ -1.19
NPC1L1-204ENST00000546276 FRYLO94915 3013 aa7.63□□□□□ -1.19
NPC1L1-204ENST00000546276 CHD6Q8TD26 2715 aa7.63□□□□□ -1.19
NPC1L1-204ENST00000546276 UNC79Q9P2D8 2635 aa7.63□□□□□ -1.19
NPC1L1-204ENST00000546276 TEP1Q99973 2627 aaKnown RBP7.62□□□□□ -1.19
NPC1L1-204ENST00000546276 MMP24-AS1A0A0U1RRL7 71 aa7.62□□□□□ -1.19
NPC1L1-204ENST00000546276 LINC00304Q8N9R0 145 aa7.6□□□□□ -1.19
NPC1L1-204ENST00000546276 KRTAP26-1Q6PEX3 210 aa7.59□□□□□ -1.19
NPC1L1-204ENST00000546276 LINC01558Q9Y6Z2 57 aa7.58□□□□□ -1.2
NPC1L1-204ENST00000546276 SPINT4Q6UDR6 99 aa7.58□□□□□ -1.2
NPC1L1-204ENST00000546276 GCN1Q92616 2671 aaKnown RBP7.57□□□□□ -1.2
NPC1L1-204ENST00000546276 LINC00472Q9H8W2 130 aa7.57□□□□□ -1.2
NPC1L1-204ENST00000546276 SPRR1BP22528 89 aa7.57□□□□□ -1.2
NPC1L1-204ENST00000546276 Q5VV11 94 aa7.57□□□□□ -1.2
NPC1L1-204ENST00000546276 WWC2-AS2Q96NR7 200 aa7.57□□□□□ -1.2
NPC1L1-204ENST00000546276 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.55□□□□□ -1.2
NPC1L1-204ENST00000546276 TNRC18O15417 2968 aaPredicted RBP7.55□□□□□ -1.2
NPC1L1-204ENST00000546276 BAHCC1Q9P281 2608 aa7.55□□□□□ -1.2
NPC1L1-204ENST00000546276 TNP2Q05952 138 aa7.54□□□□□ -1.2
NPC1L1-204ENST00000546276 HRES1P13985 223 aa7.54□□□□□ -1.2
NPC1L1-204ENST00000546276 Q8N1X5 172 aa7.54□□□□□ -1.2
NPC1L1-204ENST00000546276 SETXQ7Z333 2677 aaKnown RBP7.54□□□□□ -1.2
NPC1L1-204ENST00000546276 C9orf92A6NGG3 77 aa7.53□□□□□ -1.2
NPC1L1-204ENST00000546276 RBM12B-AS1Q9P1G2 102 aa7.53□□□□□ -1.2
NPC1L1-204ENST00000546276 STAB1Q9NY15 2570 aa7.52□□□□□ -1.2
NPC1L1-204ENST00000546276 COL6A5A8TX70 2615 aa7.49□□□□□ -1.21
NPC1L1-204ENST00000546276 KRTAP4-16G5E9R7 235 aaPredicted RBP7.48□□□□□ -1.21
NPC1L1-204ENST00000546276 KALRNO60229 2985 aa7.47□□□□□ -1.21
NPC1L1-204ENST00000546276 FLNCQ14315 2725 aa7.46□□□□□ -1.21
NPC1L1-204ENST00000546276 CRIPTQ9P021 101 aa7.46□□□□□ -1.22
NPC1L1-204ENST00000546276 COL6A3P12111 3177 aa7.46□□□□□ -1.22
NPC1L1-204ENST00000546276 NBEAL2Q6ZNJ1 2754 aa7.44□□□□□ -1.22
NPC1L1-204ENST00000546276 TEX15Q9BXT5 2789 aa7.44□□□□□ -1.22
NPC1L1-204ENST00000546276 ZCCHC13Q8WW36 166 aaKnown RBP7.44□□□□□ -1.22
NPC1L1-204ENST00000546276 PLAC8Q9NZF1 115 aa7.44□□□□□ -1.22
NPC1L1-204ENST00000546276 SPINK7P58062 85 aa7.43□□□□□ -1.22
NPC1L1-204ENST00000546276 KRTAP1-5Q9BYS1 174 aa7.43□□□□□ -1.22
NPC1L1-204ENST00000546276 BOD1L1Q8NFC6 3051 aa7.42□□□□□ -1.22
NPC1L1-204ENST00000546276 SMR3BP02814 79 aaPredicted RBP7.41□□□□□ -1.22
NPC1L1-204ENST00000546276 KRTAP29-1A8MX34 341 aaPredicted RBP7.41□□□□□ -1.22
NPC1L1-204ENST00000546276 Q5W150 140 aa7.4□□□□□ -1.22
NPC1L1-204ENST00000546276 ADGRG4Q8IZF6 3080 aa7.39□□□□□ -1.23
NPC1L1-204ENST00000546276 PRAC1Q96KF2 57 aa7.39□□□□□ -1.23
NPC1L1-204ENST00000546276 A0A1B0GU33 70 aa7.38□□□□□ -1.23
NPC1L1-204ENST00000546276 LINC01554Q52M75 96 aa7.38□□□□□ -1.23
NPC1L1-204ENST00000546276 NOTCH1P46531 2555 aa7.37□□□□□ -1.23
NPC1L1-204ENST00000546276 A0A0D9SG42 100 aa7.36□□□□□ -1.23
NPC1L1-204ENST00000546276 WDFY3Q8IZQ1 3526 aa7.35□□□□□ -1.23
NPC1L1-204ENST00000546276 DMXL2Q8TDJ6 3036 aa7.35□□□□□ -1.23
NPC1L1-204ENST00000546276 Q6ZR54 194 aa7.35□□□□□ -1.23
NPC1L1-204ENST00000546276 CFAP47Q6ZTR5 3102 aa7.33□□□□□ -1.24
NPC1L1-204ENST00000546276 NBEAL1Q6ZS30 2694 aa7.33□□□□□ -1.24
NPC1L1-204ENST00000546276 LCE6AA0A183 80 aa7.32□□□□□ -1.24
NPC1L1-204ENST00000546276 LINC00483Q53H64 154 aa7.32□□□□□ -1.24
NPC1L1-204ENST00000546276 TACC2O95359 2948 aa7.32□□□□□ -1.24
NPC1L1-204ENST00000546276 ATMQ13315 3056 aa7.3□□□□□ -1.24
NPC1L1-204ENST00000546276 DMAC1Q96GE9 116 aa7.3□□□□□ -1.24
NPC1L1-204ENST00000546276 UBR5O95071 2799 aaPredicted RBP7.29□□□□□ -1.24
NPC1L1-204ENST00000546276 MUC3AQ02505 3323 aa7.29□□□□□ -1.24
NPC1L1-204ENST00000546276 ASH1LQ9NR48 2969 aaKnown RBP7.28□□□□□ -1.24
NPC1L1-204ENST00000546276 COL12A1Q99715 3063 aa7.27□□□□□ -1.25
NPC1L1-204ENST00000546276 CSAG1Q6PB30 78 aa7.26□□□□□ -1.25
NPC1L1-204ENST00000546276 ITPR2Q14571 2701 aa7.26□□□□□ -1.25
NPC1L1-204ENST00000546276 PANO1I0J062 215 aa7.25□□□□□ -1.25
NPC1L1-204ENST00000546276 DMDP11532 3685 aa7.25□□□□□ -1.25
NPC1L1-204ENST00000546276 LRBAP50851 2863 aa7.25□□□□□ -1.25
NPC1L1-204ENST00000546276 ITPR1Q14643 2758 aa7.25□□□□□ -1.25
NPC1L1-204ENST00000546276 KRTAP7-1Q8IUC3 87 aa7.24□□□□□ -1.25
NPC1L1-204ENST00000546276 ZZEF1O43149 2961 aa7.23□□□□□ -1.25
NPC1L1-204ENST00000546276 LOC400499M0QZD8 3231 aa7.21□□□□□ -1.26
NPC1L1-204ENST00000546276 KRTAP11-1Q8IUC1 163 aa7.19□□□□□ -1.26
NPC1L1-204ENST00000546276 DMXL1Q9Y485 3027 aa7.19□□□□□ -1.26
NPC1L1-204ENST00000546276 DCHS1Q96JQ0 3298 aa7.19□□□□□ -1.26
NPC1L1-204ENST00000546276 A0A087X002 238 aa7.18□□□□□ -1.26
NPC1L1-204ENST00000546276 NOTCH2NLQ7Z3S9 236 aa7.18□□□□□ -1.26
NPC1L1-204ENST00000546276 ASB16-AS1Q495Z4 193 aa7.17□□□□□ -1.26
NPC1L1-204ENST00000546276 COX6B2Q6YFQ2 88 aa7.17□□□□□ -1.26
NPC1L1-204ENST00000546276 HIVEP1P15822 2718 aa7.16□□□□□ -1.26
NPC1L1-204ENST00000546276 A6NN06 94 aa7.15□□□□□ -1.27
NPC1L1-204ENST00000546276 H3BS24 57 aa7.15□□□□□ -1.27
NPC1L1-204ENST00000546276 J3QL48 77 aa7.13□□□□□ -1.27
NPC1L1-204ENST00000546276 ZFHX4Q86UP3 3567 aa7.13□□□□□ -1.27
NPC1L1-204ENST00000546276 UTP20O75691 2785 aaKnown RBP7.13□□□□□ -1.27
NPC1L1-204ENST00000546276 SPATA8Q6RVD6 105 aa7.12□□□□□ -1.27
NPC1L1-204ENST00000546276 APCP25054 2843 aa7.11□□□□□ -1.27
NPC1L1-204ENST00000546276 KRTAP10-1P60331 282 aa7.1□□□□□ -1.27
NPC1L1-204ENST00000546276 KRTAP10-2P60368 255 aa7.1□□□□□ -1.27
NPC1L1-204ENST00000546276 NSD1Q96L73 2696 aaPredicted RBP7.1□□□□□ -1.27
NPC1L1-204ENST00000546276 Q6ZSA8 131 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms