RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 SPANXA2-OT1Q8N9U9 137 aa5.49□□□□□ -1.53
TDP1-204ENST00000545686 PKIGQ9Y2B9 76 aa5.49□□□□□ -1.53
TDP1-204ENST00000545686 UBE2AP49459 152 aa5.48□□□□□ -1.53
TDP1-204ENST00000545686 WFDC13Q8IUB5 93 aa5.48□□□□□ -1.53
TDP1-204ENST00000545686 V9GYY9 64 aa5.48□□□□□ -1.53
TDP1-204ENST00000545686 A0A0G2JQZ4 141 aa5.47□□□□□ -1.53
TDP1-204ENST00000545686 A0A1W2PNN7 141 aa5.47□□□□□ -1.53
TDP1-204ENST00000545686 C1orf195Q5TG92 126 aa5.47□□□□□ -1.53
TDP1-204ENST00000545686 PRR15Q8IV56 129 aa5.47□□□□□ -1.53
TDP1-204ENST00000545686 A8MWP4 228 aa5.46□□□□□ -1.54
TDP1-204ENST00000545686 DEFB116Q30KQ4 102 aa5.46□□□□□ -1.54
TDP1-204ENST00000545686 CASC2Q6XLA1 102 aa5.46□□□□□ -1.54
TDP1-204ENST00000545686 FLNBO75369 2602 aaKnown RBP5.46□□□□□ -1.54
TDP1-204ENST00000545686 KRTAP24-1Q3LI83 254 aa5.46□□□□□ -1.54
TDP1-204ENST00000545686 B9D2Q9BPU9 175 aa5.46□□□□□ -1.54
TDP1-204ENST00000545686 IGKV2-24A0A0C4DH68 120 aa5.45□□□□□ -1.54
TDP1-204ENST00000545686 H0Y9P7 68 aa5.45□□□□□ -1.54
TDP1-204ENST00000545686 C14orf177Q52M58 125 aa5.45□□□□□ -1.54
TDP1-204ENST00000545686 LINC00208Q96KT6 92 aa5.45□□□□□ -1.54
TDP1-204ENST00000545686 LINC00472Q9H8W2 130 aa5.45□□□□□ -1.54
TDP1-204ENST00000545686 LRCOL1A6NCL2 159 aa5.44□□□□□ -1.54
TDP1-204ENST00000545686 MAST4O15021 2626 aa5.44□□□□□ -1.54
TDP1-204ENST00000545686 HUWE1Q7Z6Z7 4374 aaKnown RBP5.44□□□□□ -1.54
TDP1-204ENST00000545686 F8P00451 2351 aa5.44□□□□□ -1.54
TDP1-204ENST00000545686 RPL37AP61513 92 aaKnown RBP5.43□□□□□ -1.54
TDP1-204ENST00000545686 PRR4Q16378 134 aa5.43□□□□□ -1.54
TDP1-204ENST00000545686 BAHCC1Q9P281 2608 aa5.42□□□□□ -1.54
TDP1-204ENST00000545686 KRTAP1-5Q9BYS1 174 aa5.42□□□□□ -1.54
TDP1-204ENST00000545686 DNAH10Q8IVF4 4471 aa5.42□□□□□ -1.54
TDP1-204ENST00000545686 C9orf163Q8N9P6 203 aa5.41□□□□□ -1.54
TDP1-204ENST00000545686 STAB1Q9NY15 2570 aa5.41□□□□□ -1.54
TDP1-204ENST00000545686 PSPHP1O15172 72 aa5.4□□□□□ -1.54
TDP1-204ENST00000545686 PHF5AQ7RTV0 110 aaKnown RBP5.4□□□□□ -1.54
TDP1-204ENST00000545686 KRTAP11-1Q8IUC1 163 aa5.4□□□□□ -1.55
TDP1-204ENST00000545686 LIMD2Q9BT23 127 aa5.39□□□□□ -1.55
TDP1-204ENST00000545686 MMP24-AS1A0A0U1RRL7 71 aa5.39□□□□□ -1.55
TDP1-204ENST00000545686 DNAH9Q9NYC9 4486 aa5.39□□□□□ -1.55
TDP1-204ENST00000545686 K7EIL1 84 aa5.38□□□□□ -1.55
TDP1-204ENST00000545686 CHTF8P0CG12 524 aa5.38□□□□□ -1.55
TDP1-204ENST00000545686 KRTAP13-1Q8IUC0 172 aa5.38□□□□□ -1.55
TDP1-204ENST00000545686 A8MUN3 132 aa5.37□□□□□ -1.55
TDP1-204ENST00000545686 NOTCH1P46531 2555 aa5.37□□□□□ -1.55
TDP1-204ENST00000545686 MOBPQ13875 183 aa5.37□□□□□ -1.55
TDP1-204ENST00000545686 Q5VV11 94 aa5.37□□□□□ -1.55
TDP1-204ENST00000545686 UBE2DNLQ8IWF7 75 aa5.37□□□□□ -1.55
TDP1-204ENST00000545686 TP53AIP1Q9HCN2 124 aa5.37□□□□□ -1.55
TDP1-204ENST00000545686 ASB16-AS1Q495Z4 193 aa5.36□□□□□ -1.55
TDP1-204ENST00000545686 Q8N9P0 234 aaPredicted RBP5.36□□□□□ -1.55
TDP1-204ENST00000545686 DYNC2H1Q8NCM8 4307 aaKnown RBP5.36□□□□□ -1.55
TDP1-204ENST00000545686 NBEAL1Q6ZS30 2694 aa5.36□□□□□ -1.55
TDP1-204ENST00000545686 IGLV7-46A0A075B6I9 117 aa5.36□□□□□ -1.55
TDP1-204ENST00000545686 LYSTQ99698 3801 aa5.36□□□□□ -1.55
TDP1-204ENST00000545686 FBN1P35555 2871 aaKnown RBP5.36□□□□□ -1.55
TDP1-204ENST00000545686 PRB2P02812 416 aaPredicted RBP5.35□□□□□ -1.55
TDP1-204ENST00000545686 TENM2Q9NT68 2774 aa5.34□□□□□ -1.55
TDP1-204ENST00000545686 APLNQ9ULZ1 77 aa5.34□□□□□ -1.55
TDP1-204ENST00000545686 Q96NJ1 140 aa5.34□□□□□ -1.56
TDP1-204ENST00000545686 SRRM2Q9UQ35 2752 aaKnown RBP5.33□□□□□ -1.56
TDP1-204ENST00000545686 PMAIP1Q13794 54 aa5.33□□□□□ -1.56
TDP1-204ENST00000545686 LINC00483Q53H64 154 aa5.33□□□□□ -1.56
TDP1-204ENST00000545686 Q6ZR54 194 aa5.33□□□□□ -1.56
TDP1-204ENST00000545686 COA5Q86WW8 74 aa5.33□□□□□ -1.56
TDP1-204ENST00000545686 LOC101927531A0A1B0GV80 90 aa5.32□□□□□ -1.56
TDP1-204ENST00000545686 Q75L30 129 aa5.32□□□□□ -1.56
TDP1-204ENST00000545686 PRR15LQ9BU68 103 aa5.31□□□□□ -1.56
TDP1-204ENST00000545686 C8orf17Q9NRJ1 99 aa5.31□□□□□ -1.56
TDP1-204ENST00000545686 CHKB-CPT1BH3BT56 60 aa5.31□□□□□ -1.56
TDP1-204ENST00000545686 ZNF706Q9Y5V0 76 aaPredicted RBP5.31□□□□□ -1.56
TDP1-204ENST00000545686 SPACA4Q8TDM5 124 aa5.3□□□□□ -1.56
TDP1-204ENST00000545686 COL6A5A8TX70 2615 aa5.29□□□□□ -1.56
TDP1-204ENST00000545686 NBDYA0A0U1RRE5 68 aa5.29□□□□□ -1.56
TDP1-204ENST00000545686 A0A1B0GVX0 72 aa5.29□□□□□ -1.56
TDP1-204ENST00000545686 CD164Q04900 197 aa5.29□□□□□ -1.56
TDP1-204ENST00000545686 IGLV9-49A0A0B4J1Y8 123 aa5.29□□□□□ -1.56
TDP1-204ENST00000545686 Q6ZRN7 208 aaPredicted RBP5.29□□□□□ -1.56
TDP1-204ENST00000545686 PANO1I0J062 215 aa5.28□□□□□ -1.56
TDP1-204ENST00000545686 COL7A1Q02388 2944 aa5.28□□□□□ -1.56
TDP1-204ENST00000545686 SEC61GP60059 68 aa5.28□□□□□ -1.56
TDP1-204ENST00000545686 STAB2Q8WWQ8 2551 aa5.27□□□□□ -1.57
TDP1-204ENST00000545686 CDK2AP2O75956 126 aa5.26□□□□□ -1.57
TDP1-204ENST00000545686 PCOTHQ58A44 107 aa5.26□□□□□ -1.57
TDP1-204ENST00000545686 MRPL34Q9BQ48 92 aaKnown RBP5.26□□□□□ -1.57
TDP1-204ENST00000545686 WWC2-AS2Q96NR7 200 aa5.26□□□□□ -1.57
TDP1-204ENST00000545686 LINC01558Q9Y6Z2 57 aa5.26□□□□□ -1.57
TDP1-204ENST00000545686 DNAH7Q8WXX0 4024 aa5.26□□□□□ -1.57
TDP1-204ENST00000545686 PLAC8Q9NZF1 115 aa5.25□□□□□ -1.57
TDP1-204ENST00000545686 IGHV6-1A0A0B4J1U7 121 aa5.25□□□□□ -1.57
TDP1-204ENST00000545686 ATP11AUNQ6ZP68 121 aa5.25□□□□□ -1.57
TDP1-204ENST00000545686 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.25□□□□□ -1.57
TDP1-204ENST00000545686 A6NED7 52 aa5.24□□□□□ -1.57
TDP1-204ENST00000545686 A8MU10 97 aa5.24□□□□□ -1.57
TDP1-204ENST00000545686 NDUFS5O43920 106 aa5.24□□□□□ -1.57
TDP1-204ENST00000545686 NUPR2A6NF83 97 aa5.23□□□□□ -1.57
TDP1-204ENST00000545686 PLECQ15149 4684 aaKnown RBP5.23□□□□□ -1.57
TDP1-204ENST00000545686 IGLV5-52A0A0A0MRZ9 124 aa5.23□□□□□ -1.57
TDP1-204ENST00000545686 CDC42SE1Q9NRR8 79 aa5.23□□□□□ -1.57
TDP1-204ENST00000545686 CSMD3Q7Z407 3707 aa5.22□□□□□ -1.57
TDP1-204ENST00000545686 LCA10Q71F78 164 aa5.22□□□□□ -1.57
TDP1-204ENST00000545686 MDFIQ99750 246 aa5.22□□□□□ -1.57
TDP1-204ENST00000545686 HRES1P13985 223 aa5.21□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms