RNA–Protein interactions for RNA: ENST00000544627.5

ATF7IP-222, Transcript of activating transcription factor 7 interacting protein, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATF7IP, Length 4,847 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATF7IP-222	ENST00000544627	SPINK7	P58062	85 aa		4.46	□□□□□ -1.7
ATF7IP-222	ENST00000544627	FP248	Q71RG6	208 aa	Predicted RBP	4.46	□□□□□ -1.7
ATF7IP-222	ENST00000544627		Q5VV11	94 aa		4.44	□□□□□ -1.7
ATF7IP-222	ENST00000544627	ASB16-AS1	Q495Z4	193 aa		4.44	□□□□□ -1.7
ATF7IP-222	ENST00000544627	AKAP13	Q12802	2813 aa		4.43	□□□□□ -1.7
ATF7IP-222	ENST00000544627	NBEAL1	Q6ZS30	2694 aa		4.43	□□□□□ -1.7
ATF7IP-222	ENST00000544627		M0R2T5	61 aa		4.42	□□□□□ -1.7
ATF7IP-222	ENST00000544627		R4GN34	69 aa		4.42	□□□□□ -1.7
ATF7IP-222	ENST00000544627	RPL37	P61927	97 aa	Known RBP	4.41	□□□□□ -1.7
ATF7IP-222	ENST00000544627		Q6ZR54	194 aa		4.41	□□□□□ -1.7
ATF7IP-222	ENST00000544627	TEP1	Q99973	2627 aa	Known RBP	4.4	□□□□□ -1.71
ATF7IP-222	ENST00000544627	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	4.4	□□□□□ -1.71
ATF7IP-222	ENST00000544627	KRTAP1-5	Q9BYS1	174 aa		4.39	□□□□□ -1.71
ATF7IP-222	ENST00000544627	CYSTM1	Q9H1C7	97 aa		4.38	□□□□□ -1.71
ATF7IP-222	ENST00000544627	CENPE	Q02224	2701 aa		4.38	□□□□□ -1.71
ATF7IP-222	ENST00000544627	LCE6A	A0A183	80 aa		4.38	□□□□□ -1.71
ATF7IP-222	ENST00000544627	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.38	□□□□□ -1.71
ATF7IP-222	ENST00000544627	CHD6	Q8TD26	2715 aa		4.37	□□□□□ -1.71
ATF7IP-222	ENST00000544627	DMBT1	Q9UGM3	2413 aa	Predicted RBP	4.37	□□□□□ -1.71
ATF7IP-222	ENST00000544627	ROMO1	P60602	79 aa		4.37	□□□□□ -1.71
ATF7IP-222	ENST00000544627	H1FX-AS1	Q4G0G2	97 aa		4.36	□□□□□ -1.71
ATF7IP-222	ENST00000544627	TEX15	Q9BXT5	2789 aa		4.35	□□□□□ -1.71
ATF7IP-222	ENST00000544627	NOTCH1	P46531	2555 aa		4.35	□□□□□ -1.71
ATF7IP-222	ENST00000544627	COL6A5	A8TX70	2615 aa		4.35	□□□□□ -1.71
ATF7IP-222	ENST00000544627	UNC79	Q9P2D8	2635 aa		4.35	□□□□□ -1.71
ATF7IP-222	ENST00000544627	KRTAP10-1	P60331	282 aa		4.35	□□□□□ -1.71
ATF7IP-222	ENST00000544627	RPS29	P62273	56 aa	Known RBP	4.35	□□□□□ -1.71
ATF7IP-222	ENST00000544627	SETX	Q7Z333	2677 aa	Known RBP	4.35	□□□□□ -1.71
ATF7IP-222	ENST00000544627	OXT	P01178	125 aa		4.34	□□□□□ -1.71
ATF7IP-222	ENST00000544627		Q5VSD8	79 aa		4.34	□□□□□ -1.71
ATF7IP-222	ENST00000544627	PRAC1	Q96KF2	57 aa		4.34	□□□□□ -1.71
ATF7IP-222	ENST00000544627	KRTAP3-3	Q9BYR6	98 aa		4.33	□□□□□ -1.72
ATF7IP-222	ENST00000544627	KRTAP3-2	Q9BYR7	98 aa		4.33	□□□□□ -1.72
ATF7IP-222	ENST00000544627	KRTAP10-2	P60368	255 aa		4.3	□□□□□ -1.72
ATF7IP-222	ENST00000544627		M0QZ58	72 aa		4.3	□□□□□ -1.72
ATF7IP-222	ENST00000544627	SPATA8	Q6RVD6	105 aa		4.29	□□□□□ -1.72
ATF7IP-222	ENST00000544627	STAB2	Q8WWQ8	2551 aa		4.29	□□□□□ -1.72
ATF7IP-222	ENST00000544627	PANO1	I0J062	215 aa		4.28	□□□□□ -1.72
ATF7IP-222	ENST00000544627	GCN1	Q92616	2671 aa	Known RBP	4.27	□□□□□ -1.73
ATF7IP-222	ENST00000544627	PLAC4	Q8WY50	150 aa		4.25	□□□□□ -1.73
ATF7IP-222	ENST00000544627	ZNF292	O60281	2723 aa		4.25	□□□□□ -1.73
ATF7IP-222	ENST00000544627	NSD1	Q96L73	2696 aa	Predicted RBP	4.24	□□□□□ -1.73
ATF7IP-222	ENST00000544627		A0A087X002	238 aa		4.24	□□□□□ -1.73
ATF7IP-222	ENST00000544627	ADM2	Q7Z4H4	148 aa		4.24	□□□□□ -1.73
ATF7IP-222	ENST00000544627	CEP350	Q5VT06	3117 aa		4.23	□□□□□ -1.73
ATF7IP-222	ENST00000544627	MAP1A	P78559	2803 aa	Predicted RBP	4.23	□□□□□ -1.73
ATF7IP-222	ENST00000544627		Q6ZRN7	208 aa	Predicted RBP	4.22	□□□□□ -1.73
ATF7IP-222	ENST00000544627	NOTCH2NL	Q7Z3S9	236 aa		4.21	□□□□□ -1.74
ATF7IP-222	ENST00000544627	KRTAP13-1	Q8IUC0	172 aa		4.19	□□□□□ -1.74
ATF7IP-222	ENST00000544627	UBR5	O95071	2799 aa	Predicted RBP	4.19	□□□□□ -1.74
ATF7IP-222	ENST00000544627		A6NN06	94 aa		4.16	□□□□□ -1.74
ATF7IP-222	ENST00000544627	KRTAP25-1	Q3LHN0	102 aa		4.15	□□□□□ -1.74
ATF7IP-222	ENST00000544627	KRTAP7-1	Q8IUC3	87 aa		4.15	□□□□□ -1.74
ATF7IP-222	ENST00000544627	KRTAP11-1	Q8IUC1	163 aa		4.14	□□□□□ -1.75
ATF7IP-222	ENST00000544627	NBEAL2	Q6ZNJ1	2754 aa		4.14	□□□□□ -1.75
ATF7IP-222	ENST00000544627		A8MUU9	505 aa		4.14	□□□□□ -1.75
ATF7IP-222	ENST00000544627	BAHCC1	Q9P281	2608 aa		4.14	□□□□□ -1.75
ATF7IP-222	ENST00000544627	CHD7	Q9P2D1	2997 aa		4.14	□□□□□ -1.75
ATF7IP-222	ENST00000544627	KRTAP13-2	Q52LG2	175 aa		4.13	□□□□□ -1.75
ATF7IP-222	ENST00000544627	KRTAP21-3	Q3LHN1	58 aa		4.13	□□□□□ -1.75
ATF7IP-222	ENST00000544627	KMT2B	Q9UMN6	2715 aa	Predicted RBP	4.12	□□□□□ -1.75
ATF7IP-222	ENST00000544627	IGSF10	Q6WRI0	2623 aa		4.12	□□□□□ -1.75
ATF7IP-222	ENST00000544627	DNAH12	Q6ZR08	3092 aa		4.12	□□□□□ -1.75
ATF7IP-222	ENST00000544627	CHD9	Q3L8U1	2897 aa		4.11	□□□□□ -1.75
ATF7IP-222	ENST00000544627	KRTAP16-1	A8MUX0	517 aa		4.11	□□□□□ -1.75
ATF7IP-222	ENST00000544627	ITPR2	Q14571	2701 aa		4.1	□□□□□ -1.75
ATF7IP-222	ENST00000544627	C5orf42	Q9H799	3197 aa		4.1	□□□□□ -1.75
ATF7IP-222	ENST00000544627	MGA	Q8IWI9	3026 aa		4.1	□□□□□ -1.75
ATF7IP-222	ENST00000544627	GOLGB1	Q14789	3259 aa	Known RBP	4.09	□□□□□ -1.75
ATF7IP-222	ENST00000544627	C20orf166-AS1	Q96NR2	134 aa		4.09	□□□□□ -1.76
ATF7IP-222	ENST00000544627		A8MU10	97 aa		4.07	□□□□□ -1.76
ATF7IP-222	ENST00000544627	UTRN	P46939	3433 aa		4.06	□□□□□ -1.76
ATF7IP-222	ENST00000544627	TNP1	P09430	55 aa		4.06	□□□□□ -1.76
ATF7IP-222	ENST00000544627	TRANK1	O15050	2925 aa		4.04	□□□□□ -1.76
ATF7IP-222	ENST00000544627	TNRC18	O15417	2968 aa	Predicted RBP	4.04	□□□□□ -1.76
ATF7IP-222	ENST00000544627	PP632	Q6XCG6	107 aa		4.04	□□□□□ -1.76
ATF7IP-222	ENST00000544627	ITPR1	Q14643	2758 aa		4.03	□□□□□ -1.76
ATF7IP-222	ENST00000544627	DSP	P15924	2871 aa	Known RBP	4.02	□□□□□ -1.77
ATF7IP-222	ENST00000544627		A0A0C4DFX4	3053 aa		3.99	□□□□□ -1.77
ATF7IP-222	ENST00000544627	CFAP54	Q96N23	3096 aa		3.99	□□□□□ -1.77
ATF7IP-222	ENST00000544627	HIVEP1	P15822	2718 aa		3.99	□□□□□ -1.77
ATF7IP-222	ENST00000544627	NIPBL	Q6KC79	2804 aa	eCLIP	3.99	□□□□□ -1.77	1e-5	■■■□□ 16.7
ATF7IP-222	ENST00000544627	PCNT	O95613	3336 aa		3.97	□□□□□ -1.77
ATF7IP-222	ENST00000544627	KRTAP23-1	A1A580	65 aa		3.97	□□□□□ -1.77
ATF7IP-222	ENST00000544627	NDUFAF8	A1L188	74 aa		3.96	□□□□□ -1.78
ATF7IP-222	ENST00000544627	TENM4	Q6N022	2769 aa		3.96	□□□□□ -1.78
ATF7IP-222	ENST00000544627	KRTAP1-4	P0C5Y4	121 aa		3.95	□□□□□ -1.78
ATF7IP-222	ENST00000544627	APC	P25054	2843 aa		3.94	□□□□□ -1.78
ATF7IP-222	ENST00000544627	FLNC	Q14315	2725 aa		3.94	□□□□□ -1.78
ATF7IP-222	ENST00000544627	FRY	Q5TBA9	3013 aa		3.93	□□□□□ -1.78
ATF7IP-222	ENST00000544627	LCE2D	Q5TA82	110 aa	Predicted RBP	3.92	□□□□□ -1.78
ATF7IP-222	ENST00000544627	XP32	Q5T750	250 aa		3.92	□□□□□ -1.78
ATF7IP-222	ENST00000544627	TPRXL	Q17RH7	258 aa		3.91	□□□□□ -1.78
ATF7IP-222	ENST00000544627	UTP20	O75691	2785 aa	Known RBP	3.91	□□□□□ -1.78
ATF7IP-222	ENST00000544627	WDFY4	Q6ZS81	3184 aa		3.89	□□□□□ -1.79
ATF7IP-222	ENST00000544627	C10orf95	Q9H7T3	257 aa		3.89	□□□□□ -1.79
ATF7IP-222	ENST00000544627	RANBP2	P49792	3224 aa	Known RBP	3.87	□□□□□ -1.79
ATF7IP-222	ENST00000544627	HTT	P42858	3142 aa		3.86	□□□□□ -1.79
ATF7IP-222	ENST00000544627		P0C880	135 aa		3.86	□□□□□ -1.79
ATF7IP-222	ENST00000544627	TACC2	O95359	2948 aa		3.85	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms