RNA–Protein interactions for RNA: ENST00000543462.1

VEGFB-204, Transcript of vascular endothelial growth factor B, humanhuman

TSL 2

Gene VEGFB, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-204ENST00000543462 TRIAP1O43715 76 aa5.7□□□□□ -1.5
VEGFB-204ENST00000543462 TSPAN13O95857 204 aa5.7□□□□□ -1.5
VEGFB-204ENST00000543462 Q6ZQY7 126 aa5.7□□□□□ -1.5
VEGFB-204ENST00000543462 SSBP3-AS1Q7Z2R9 100 aa5.7□□□□□ -1.5
VEGFB-204ENST00000543462 LRP2P98164 4655 aa5.69□□□□□ -1.5
VEGFB-204ENST00000543462 IGLV9-49A0A0B4J1Y8 123 aa5.69□□□□□ -1.5
VEGFB-204ENST00000543462 hADV29S1A0JD25 119 aa5.69□□□□□ -1.5
VEGFB-204ENST00000543462 F8W1H4 67 aa5.69□□□□□ -1.5
VEGFB-204ENST00000543462 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.69□□□□□ -1.5
VEGFB-204ENST00000543462 H0YGX0 51 aa5.68□□□□□ -1.5
VEGFB-204ENST00000543462 SLC25A20O43772 301 aa5.68□□□□□ -1.5
VEGFB-204ENST00000543462 SPAG11AQ6PDA7 123 aa5.68□□□□□ -1.5
VEGFB-204ENST00000543462 COX6CP09669 75 aa5.67□□□□□ -1.5
VEGFB-204ENST00000543462 RPS29P62273 56 aaKnown RBP5.67□□□□□ -1.5
VEGFB-204ENST00000543462 LPAP08519 4548 aa5.66□□□□□ -1.5
VEGFB-204ENST00000543462 IGLV8-61A0A075B6I0 122 aa5.66□□□□□ -1.5
VEGFB-204ENST00000543462 A0A1B0GX51 115 aa5.66□□□□□ -1.5
VEGFB-204ENST00000543462 Q1RN00 199 aa5.66□□□□□ -1.5
VEGFB-204ENST00000543462 DEFB105AQ8NG35 78 aa5.66□□□□□ -1.5
VEGFB-204ENST00000543462 PPDPFLQ8WWR9 84 aa5.66□□□□□ -1.5
VEGFB-204ENST00000543462 LAMTOR3Q9UHA4 124 aa5.66□□□□□ -1.5
VEGFB-204ENST00000543462 SPINK1P00995 79 aa5.65□□□□□ -1.5
VEGFB-204ENST00000543462 C9orf153Q5TBE3 101 aa5.65□□□□□ -1.5
VEGFB-204ENST00000543462 NAA38Q9BRA0 125 aaKnown RBP5.65□□□□□ -1.5
VEGFB-204ENST00000543462 CLEC2BQ92478 149 aa5.64□□□□□ -1.51
VEGFB-204ENST00000543462 K7ERU9 68 aa5.63□□□□□ -1.51
VEGFB-204ENST00000543462 PSMB2P49721 201 aa5.63□□□□□ -1.51
VEGFB-204ENST00000543462 ATXN8Q156A1 80 aa5.63□□□□□ -1.51
VEGFB-204ENST00000543462 PRO0461Q9UI25 63 aa5.63□□□□□ -1.51
VEGFB-204ENST00000543462 H3BMG7 143 aa5.62□□□□□ -1.51
VEGFB-204ENST00000543462 SCGB1C2P0DMR2 95 aa5.62□□□□□ -1.51
VEGFB-204ENST00000543462 CD164Q04900 197 aa5.62□□□□□ -1.51
VEGFB-204ENST00000543462 OCIAD2Q56VL3 154 aa5.62□□□□□ -1.51
VEGFB-204ENST00000543462 A0A0G2JQZ4 141 aa5.61□□□□□ -1.51
VEGFB-204ENST00000543462 TCL1BO95988 128 aa5.61□□□□□ -1.51
VEGFB-204ENST00000543462 UBR4Q5T4S7 5183 aa5.61□□□□□ -1.51
VEGFB-204ENST00000543462 RETNLBQ9BQ08 111 aa5.61□□□□□ -1.51
VEGFB-204ENST00000543462 LST1O00453 97 aa5.6□□□□□ -1.51
VEGFB-204ENST00000543462 Q5XG85 94 aa5.6□□□□□ -1.51
VEGFB-204ENST00000543462 KRTAP3-3Q9BYR6 98 aa5.6□□□□□ -1.51
VEGFB-204ENST00000543462 KRTAP3-2Q9BYR7 98 aa5.6□□□□□ -1.51
VEGFB-204ENST00000543462 J3QR89 54 aa5.59□□□□□ -1.51
VEGFB-204ENST00000543462 TRACP01848 142 aa5.59□□□□□ -1.51
VEGFB-204ENST00000543462 C4orf48Q5BLP8 95 aa5.59□□□□□ -1.51
VEGFB-204ENST00000543462 IGFL1Q6UW32 110 aa5.59□□□□□ -1.51
VEGFB-204ENST00000543462 H3BT86 120 aa5.58□□□□□ -1.52
VEGFB-204ENST00000543462 PRR4Q16378 134 aa5.58□□□□□ -1.52
VEGFB-204ENST00000543462 Q6JHZ5 121 aa5.58□□□□□ -1.52
VEGFB-204ENST00000543462 FP248Q71RG6 208 aaPredicted RBP5.58□□□□□ -1.52
VEGFB-204ENST00000543462 TPRXLQ17RH7 258 aa5.57□□□□□ -1.52
VEGFB-204ENST00000543462 TEN1Q86WV5 123 aa5.57□□□□□ -1.52
VEGFB-204ENST00000543462 F8WEM9 126 aa5.56□□□□□ -1.52
VEGFB-204ENST00000543462 SNCGO76070 127 aa5.56□□□□□ -1.52
VEGFB-204ENST00000543462 NDUFV3P56181 108 aaKnown RBP5.56□□□□□ -1.52
VEGFB-204ENST00000543462 SMCPP49901 116 aaPredicted RBP5.55□□□□□ -1.52
VEGFB-204ENST00000543462 ANKRD29Q8N6D5 301 aa5.55□□□□□ -1.52
VEGFB-204ENST00000543462 LIMD2Q9BT23 127 aa5.55□□□□□ -1.52
VEGFB-204ENST00000543462 ORMDL1Q9P0S3 153 aa5.55□□□□□ -1.52
VEGFB-204ENST00000543462 IGLV7-46A0A075B6I9 117 aa5.54□□□□□ -1.52
VEGFB-204ENST00000543462 C9JAW5 83 aa5.54□□□□□ -1.52
VEGFB-204ENST00000543462 H3BQ85 93 aa5.54□□□□□ -1.52
VEGFB-204ENST00000543462 DNAL4O96015 105 aa5.54□□□□□ -1.52
VEGFB-204ENST00000543462 GHRHP01286 108 aa5.54□□□□□ -1.52
VEGFB-204ENST00000543462 KRTAP13-3Q3SY46 172 aa5.54□□□□□ -1.52
VEGFB-204ENST00000543462 ETDBQ3ZM63 59 aa5.54□□□□□ -1.52
VEGFB-204ENST00000543462 Q6Q795 121 aa5.54□□□□□ -1.52
VEGFB-204ENST00000543462 HRCT1Q6UXD1 115 aa5.54□□□□□ -1.52
VEGFB-204ENST00000543462 TRBV7-7A0A0K0K1E9 115 aa5.53□□□□□ -1.52
VEGFB-204ENST00000543462 ASB16-AS1Q495Z4 193 aa5.53□□□□□ -1.52
VEGFB-204ENST00000543462 MUC17Q685J3 4493 aa5.51□□□□□ -1.53
VEGFB-204ENST00000543462 TMEM256-PLSCR3K7ERE1 68 aa5.51□□□□□ -1.53
VEGFB-204ENST00000543462 C1orf195Q5TG92 126 aa5.51□□□□□ -1.53
VEGFB-204ENST00000543462 A0A1W2PNM2 257 aa5.5□□□□□ -1.53
VEGFB-204ENST00000543462 TRBV7-4A0A0J9YYF1 115 aa5.49□□□□□ -1.53
VEGFB-204ENST00000543462 FAM240AA0A1B0GVK7 77 aa5.48□□□□□ -1.53
VEGFB-204ENST00000543462 MTURNQ8N3F0 131 aa5.48□□□□□ -1.53
VEGFB-204ENST00000543462 BAALC-AS2P0C853 105 aa5.47□□□□□ -1.53
VEGFB-204ENST00000543462 RNF213Q63HN8 5207 aa5.47□□□□□ -1.53
VEGFB-204ENST00000543462 OBSCN-AS1Q96MR7 158 aa5.46□□□□□ -1.54
VEGFB-204ENST00000543462 Q96NJ1 140 aa5.46□□□□□ -1.54
VEGFB-204ENST00000543462 VPS25Q9BRG1 176 aa5.46□□□□□ -1.54
VEGFB-204ENST00000543462 ACYP1P07311 99 aa5.45□□□□□ -1.54
VEGFB-204ENST00000543462 A0A1B0GV72 72 aa5.44□□□□□ -1.54
VEGFB-204ENST00000543462 C21orf62-AS1Q17RA5 79 aa5.44□□□□□ -1.54
VEGFB-204ENST00000543462 XP32Q5T750 250 aa5.44□□□□□ -1.54
VEGFB-204ENST00000543462 A0A087WSZ3 146 aa5.43□□□□□ -1.54
VEGFB-204ENST00000543462 CDIP1Q9H305 208 aa5.43□□□□□ -1.54
VEGFB-204ENST00000543462 LOC110117498A0A087WWA1 95 aa5.42□□□□□ -1.54
VEGFB-204ENST00000543462 JMJD7-PLA2G4BH0Y9G9 81 aa5.42□□□□□ -1.54
VEGFB-204ENST00000543462 RBM3P98179 157 aaKnown RBP5.42□□□□□ -1.54
VEGFB-204ENST00000543462 SS18L2Q9UHA2 77 aa5.42□□□□□ -1.54
VEGFB-204ENST00000543462 CCKP06307 115 aa5.41□□□□□ -1.54
VEGFB-204ENST00000543462 Q6ZQT0 140 aa5.41□□□□□ -1.54
VEGFB-204ENST00000543462 SCGB1A1P11684 91 aa5.4□□□□□ -1.54
VEGFB-204ENST00000543462 SIGMAR1Q99720 223 aa5.39□□□□□ -1.55
VEGFB-204ENST00000543462 LINC00472Q9H8W2 130 aa5.39□□□□□ -1.55
VEGFB-204ENST00000543462 PDE6GP18545 87 aa5.38□□□□□ -1.55
VEGFB-204ENST00000543462 DSCR8Q96T75 97 aa5.38□□□□□ -1.55
VEGFB-204ENST00000543462 MUC2Q02817 5179 aa5.37□□□□□ -1.55
VEGFB-204ENST00000543462 C9orf92A6NGG3 77 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms