RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 Q5XG85 94 aa8.58□□□□□ -1.04
ECHDC2-223ENST00000542552 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.58□□□□□ -1.04
ECHDC2-223ENST00000542552 TMA7Q9Y2S6 64 aaKnown RBP8.58□□□□□ -1.04
ECHDC2-223ENST00000542552 A0A0G2JQZ4 141 aa8.57□□□□□ -1.04
ECHDC2-223ENST00000542552 FAT4Q6V0I7 4981 aa8.55□□□□□ -1.04
ECHDC2-223ENST00000542552 IGLV8-61A0A075B6I0 122 aa8.55□□□□□ -1.04
ECHDC2-223ENST00000542552 PPDPFLQ8WWR9 84 aa8.55□□□□□ -1.04
ECHDC2-223ENST00000542552 TMEM238LA0A1B0GVL6 79 aa8.54□□□□□ -1.04
ECHDC2-223ENST00000542552 A6NJY4 79 aa8.54□□□□□ -1.04
ECHDC2-223ENST00000542552 FXYD2P54710 66 aa8.54□□□□□ -1.04
ECHDC2-223ENST00000542552 PRO1854Q9UHT4 67 aa8.54□□□□□ -1.04
ECHDC2-223ENST00000542552 F8WEM9 126 aa8.53□□□□□ -1.04
ECHDC2-223ENST00000542552 H0YGX0 51 aa8.53□□□□□ -1.04
ECHDC2-223ENST00000542552 ASB16-AS1Q495Z4 193 aa8.53□□□□□ -1.04
ECHDC2-223ENST00000542552 XP32Q5T750 250 aa8.52□□□□□ -1.05
ECHDC2-223ENST00000542552 HSD52Q0P140 79 aa8.51□□□□□ -1.05
ECHDC2-223ENST00000542552 OCIAD2Q56VL3 154 aa8.51□□□□□ -1.05
ECHDC2-223ENST00000542552 C1orf195Q5TG92 126 aa8.51□□□□□ -1.05
ECHDC2-223ENST00000542552 Q6JHZ5 121 aa8.51□□□□□ -1.05
ECHDC2-223ENST00000542552 FAM218AQ96MZ4 157 aa8.51□□□□□ -1.05
ECHDC2-223ENST00000542552 A0A0U1RQV1 116 aa8.48□□□□□ -1.05
ECHDC2-223ENST00000542552 IGFL1Q6UW32 110 aa8.48□□□□□ -1.05
ECHDC2-223ENST00000542552 CLEC2BQ92478 149 aa8.48□□□□□ -1.05
ECHDC2-223ENST00000542552 UQCR10Q9UDW1 63 aa8.48□□□□□ -1.05
ECHDC2-223ENST00000542552 A0A1B0GX51 115 aa8.47□□□□□ -1.05
ECHDC2-223ENST00000542552 SNCGO76070 127 aa8.47□□□□□ -1.05
ECHDC2-223ENST00000542552 SEC61BP60468 96 aaKnown RBP8.47□□□□□ -1.05
ECHDC2-223ENST00000542552 SNHG12Q9BXW3 62 aa8.47□□□□□ -1.05
ECHDC2-223ENST00000542552 TRIAP1O43715 76 aa8.46□□□□□ -1.06
ECHDC2-223ENST00000542552 TCL1BO95988 128 aa8.46□□□□□ -1.06
ECHDC2-223ENST00000542552 TRBV7-7A0A0K0K1E9 115 aa8.44□□□□□ -1.06
ECHDC2-223ENST00000542552 H3BUT2 72 aa8.43□□□□□ -1.06
ECHDC2-223ENST00000542552 K7ERJ3 54 aa8.43□□□□□ -1.06
ECHDC2-223ENST00000542552 KRTAP4-1Q9BYQ7 146 aa8.43□□□□□ -1.06
ECHDC2-223ENST00000542552 C9orf92A6NGG3 77 aa8.42□□□□□ -1.06
ECHDC2-223ENST00000542552 NDUFV3P56181 108 aaKnown RBP8.41□□□□□ -1.06
ECHDC2-223ENST00000542552 GHRHP01286 108 aa8.4□□□□□ -1.06
ECHDC2-223ENST00000542552 Q6Q795 121 aa8.39□□□□□ -1.07
ECHDC2-223ENST00000542552 LCE2AQ5TA79 106 aaPredicted RBP8.38□□□□□ -1.07
ECHDC2-223ENST00000542552 PSMB2P49721 201 aa8.37□□□□□ -1.07
ECHDC2-223ENST00000542552 H3BMG7 143 aa8.35□□□□□ -1.07
ECHDC2-223ENST00000542552 COX6CP09669 75 aa8.35□□□□□ -1.07
ECHDC2-223ENST00000542552 FABP2P12104 132 aa8.35□□□□□ -1.07
ECHDC2-223ENST00000542552 TEN1Q86WV5 123 aa8.34□□□□□ -1.07
ECHDC2-223ENST00000542552 H3BQ85 93 aa8.33□□□□□ -1.08
ECHDC2-223ENST00000542552 DNAL4O96015 105 aa8.32□□□□□ -1.08
ECHDC2-223ENST00000542552 PCOTHQ58A44 107 aa8.32□□□□□ -1.08
ECHDC2-223ENST00000542552 ORMDL1Q9P0S3 153 aa8.32□□□□□ -1.08
ECHDC2-223ENST00000542552 LST1O00453 97 aa8.31□□□□□ -1.08
ECHDC2-223ENST00000542552 SMIM6P0DI80 62 aa8.31□□□□□ -1.08
ECHDC2-223ENST00000542552 SS18L2Q9UHA2 77 aa8.3□□□□□ -1.08
ECHDC2-223ENST00000542552 A0A1W2PNM2 257 aa8.29□□□□□ -1.08
ECHDC2-223ENST00000542552 TMEM256-PLSCR3K7ERE1 68 aa8.29□□□□□ -1.08
ECHDC2-223ENST00000542552 RPL37P61927 97 aaKnown RBP8.29□□□□□ -1.08
ECHDC2-223ENST00000542552 TRACP01848 142 aa8.28□□□□□ -1.08
ECHDC2-223ENST00000542552 A0A087WSZ3 146 aa8.27□□□□□ -1.09
ECHDC2-223ENST00000542552 UBE2V1Q13404 147 aa8.26□□□□□ -1.09
ECHDC2-223ENST00000542552 M0R143 59 aa8.25□□□□□ -1.09
ECHDC2-223ENST00000542552 SCGB1C2P0DMR2 95 aa8.25□□□□□ -1.09
ECHDC2-223ENST00000542552 ANKRD29Q8N6D5 301 aa8.25□□□□□ -1.09
ECHDC2-223ENST00000542552 Q96NJ1 140 aa8.25□□□□□ -1.09
ECHDC2-223ENST00000542552 TRBV7-4A0A0J9YYF1 115 aa8.24□□□□□ -1.09
ECHDC2-223ENST00000542552 OBSCN-AS1Q96MR7 158 aa8.23□□□□□ -1.09
ECHDC2-223ENST00000542552 KRTAP19-2Q3LHN2 52 aa8.22□□□□□ -1.09
ECHDC2-223ENST00000542552 LCE2CQ5TA81 110 aa8.22□□□□□ -1.09
ECHDC2-223ENST00000542552 KRTAP9-2Q9BYQ4 174 aa8.22□□□□□ -1.09
ECHDC2-223ENST00000542552 A0A1B0GV72 72 aa8.21□□□□□ -1.1
ECHDC2-223ENST00000542552 LOC105371267A0A1B0GV96 52 aa8.2□□□□□ -1.1
ECHDC2-223ENST00000542552 Q75L30 129 aa8.19□□□□□ -1.1
ECHDC2-223ENST00000542552 CCKP06307 115 aa8.18□□□□□ -1.1
ECHDC2-223ENST00000542552 TSTD3H0UI37 97 aa8.17□□□□□ -1.1
ECHDC2-223ENST00000542552 BAALC-AS2P0C853 105 aa8.17□□□□□ -1.1
ECHDC2-223ENST00000542552 RBM3P98179 157 aaKnown RBP8.16□□□□□ -1.1
ECHDC2-223ENST00000542552 NAA38Q9BRA0 125 aaKnown RBP8.16□□□□□ -1.1
ECHDC2-223ENST00000542552 ATXN8Q156A1 80 aa8.14□□□□□ -1.11
ECHDC2-223ENST00000542552 LINC00472Q9H8W2 130 aa8.14□□□□□ -1.11
ECHDC2-223ENST00000542552 C20orf166-AS1Q96NR2 134 aa8.13□□□□□ -1.11
ECHDC2-223ENST00000542552 A8MUU9 505 aa8.12□□□□□ -1.11
ECHDC2-223ENST00000542552 DSCR8Q96T75 97 aa8.12□□□□□ -1.11
ECHDC2-223ENST00000542552 IGKV4-1P06312 121 aa8.11□□□□□ -1.11
ECHDC2-223ENST00000542552 ATP11AUNQ6ZP68 121 aa8.11□□□□□ -1.11
ECHDC2-223ENST00000542552 SIGMAR1Q99720 223 aa8.11□□□□□ -1.11
ECHDC2-223ENST00000542552 C9JAW5 83 aa8.09□□□□□ -1.11
ECHDC2-223ENST00000542552 DSCR10P59022 87 aa8.09□□□□□ -1.11
ECHDC2-223ENST00000542552 DEFB116Q30KQ4 102 aa8.08□□□□□ -1.12
ECHDC2-223ENST00000542552 VPS25Q9BRG1 176 aa8.08□□□□□ -1.12
ECHDC2-223ENST00000542552 TRBV20-1A0A075B6N2 111 aa8.07□□□□□ -1.12
ECHDC2-223ENST00000542552 LINC00313P59037 77 aa8.07□□□□□ -1.12
ECHDC2-223ENST00000542552 MT1HP80294 61 aa8.07□□□□□ -1.12
ECHDC2-223ENST00000542552 BATFQ16520 125 aa8.07□□□□□ -1.12
ECHDC2-223ENST00000542552 LYRM7Q5U5X0 104 aa8.07□□□□□ -1.12
ECHDC2-223ENST00000542552 FLGP20930 4061 aaPredicted RBP8.07□□□□□ -1.12
ECHDC2-223ENST00000542552 KRTAP9-6A0A140TA67 174 aa8.06□□□□□ -1.12
ECHDC2-223ENST00000542552 KRTAP16-1A8MUX0 517 aa8.06□□□□□ -1.12
ECHDC2-223ENST00000542552 JMJD7-PLA2G4BH0Y9G9 81 aa8.06□□□□□ -1.12
ECHDC2-223ENST00000542552 C21orf62-AS1Q17RA5 79 aa8.05□□□□□ -1.12
ECHDC2-223ENST00000542552 NOTCH2NLQ7Z3S9 236 aa8.05□□□□□ -1.12
ECHDC2-223ENST00000542552 LOC110117498A0A087WWA1 95 aa8.04□□□□□ -1.12
ECHDC2-223ENST00000542552 Q6ZQT0 140 aa8.04□□□□□ -1.12
ECHDC2-223ENST00000542552 C9orf118A6NHY6 69 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms