RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 KRTAP10-2P60368 255 aa6.36□□□□□ -1.39
GABRB3-204ENST00000541819 SPATA8Q6RVD6 105 aa6.35□□□□□ -1.39
GABRB3-204ENST00000541819 EPG5Q9HCE0 2579 aa6.34□□□□□ -1.39
GABRB3-204ENST00000541819 KRTAP1-5Q9BYS1 174 aa6.34□□□□□ -1.39
GABRB3-204ENST00000541819 PANO1I0J062 215 aa6.32□□□□□ -1.4
GABRB3-204ENST00000541819 ASB16-AS1Q495Z4 193 aa6.31□□□□□ -1.4
GABRB3-204ENST00000541819 SRCAPQ6ZRS2 3230 aa6.3□□□□□ -1.4
GABRB3-204ENST00000541819 CYSTM1Q9H1C7 97 aa6.29□□□□□ -1.4
GABRB3-204ENST00000541819 C20orf166-AS1Q96NR2 134 aa6.29□□□□□ -1.4
GABRB3-204ENST00000541819 WDR87Q6ZQQ6 2873 aa6.29□□□□□ -1.4
GABRB3-204ENST00000541819 HECTD1Q9ULT8 2610 aa6.24□□□□□ -1.41
GABRB3-204ENST00000541819 A8MUU9 505 aa6.23□□□□□ -1.41
GABRB3-204ENST00000541819 MGAM2Q2M2H8 2515 aa6.23□□□□□ -1.41
GABRB3-204ENST00000541819 KRTAP16-1A8MUX0 517 aa6.23□□□□□ -1.41
GABRB3-204ENST00000541819 A0A087X002 238 aa6.2□□□□□ -1.42
GABRB3-204ENST00000541819 RPS29P62273 56 aaKnown RBP6.2□□□□□ -1.42
GABRB3-204ENST00000541819 KRTAP29-1A8MX34 341 aaPredicted RBP6.17□□□□□ -1.42
GABRB3-204ENST00000541819 USP24Q9UPU5 2620 aa6.17□□□□□ -1.42
GABRB3-204ENST00000541819 KRTAP25-1Q3LHN0 102 aa6.15□□□□□ -1.42
GABRB3-204ENST00000541819 KRTAP4-16G5E9R7 235 aaPredicted RBP6.15□□□□□ -1.42
GABRB3-204ENST00000541819 MAST4O15021 2626 aa6.12□□□□□ -1.43
GABRB3-204ENST00000541819 TNP1P09430 55 aa6.12□□□□□ -1.43
GABRB3-204ENST00000541819 A8MU10 97 aa6.12□□□□□ -1.43
GABRB3-204ENST00000541819 CENPFP49454 3210 aa6.12□□□□□ -1.43
GABRB3-204ENST00000541819 ATRQ13535 2644 aa6.11□□□□□ -1.43
GABRB3-204ENST00000541819 NOTCH2NLQ7Z3S9 236 aa6.09□□□□□ -1.43
GABRB3-204ENST00000541819 C10orf95Q9H7T3 257 aa6.05□□□□□ -1.44
GABRB3-204ENST00000541819 NDUFAF8A1L188 74 aa6.01□□□□□ -1.45
GABRB3-204ENST00000541819 A6NN06 94 aa6.01□□□□□ -1.45
GABRB3-204ENST00000541819 GOLGB1Q14789 3259 aaKnown RBP5.99□□□□□ -1.45
GABRB3-204ENST00000541819 SETXQ7Z333 2677 aaKnown RBP5.99□□□□□ -1.45
GABRB3-204ENST00000541819 KRTAP13-2Q52LG2 175 aa5.98□□□□□ -1.45
GABRB3-204ENST00000541819 KRTAP11-1Q8IUC1 163 aa5.97□□□□□ -1.45
GABRB3-204ENST00000541819 Q6ZRN7 208 aaPredicted RBP5.97□□□□□ -1.45
GABRB3-204ENST00000541819 HELZ2Q9BYK8 2649 aaKnown RBP5.97□□□□□ -1.45
GABRB3-204ENST00000541819 DNAH12Q6ZR08 3092 aa5.96□□□□□ -1.46
GABRB3-204ENST00000541819 FLG2Q5D862 2391 aaPredicted RBP5.95□□□□□ -1.46
GABRB3-204ENST00000541819 BPTFQ12830 3046 aa5.94□□□□□ -1.46
GABRB3-204ENST00000541819 KRTAP10-8P60410 259 aa5.91□□□□□ -1.46
GABRB3-204ENST00000541819 PP632Q6XCG6 107 aa5.91□□□□□ -1.46
GABRB3-204ENST00000541819 STAB1Q9NY15 2570 aa5.91□□□□□ -1.46
GABRB3-204ENST00000541819 KRTAP13-1Q8IUC0 172 aa5.88□□□□□ -1.47
GABRB3-204ENST00000541819 FLNAP21333 2647 aaKnown RBP5.86□□□□□ -1.47
GABRB3-204ENST00000541819 KRTAP7-1Q8IUC3 87 aa5.86□□□□□ -1.47
GABRB3-204ENST00000541819 CHD7Q9P2D1 2997 aa5.84□□□□□ -1.47
GABRB3-204ENST00000541819 CHD9Q3L8U1 2897 aa5.83□□□□□ -1.48
GABRB3-204ENST00000541819 A0A1B0GVY2 172 aa5.82□□□□□ -1.48
GABRB3-204ENST00000541819 DMBT1Q9UGM3 2413 aaPredicted RBP5.81□□□□□ -1.48
GABRB3-204ENST00000541819 ITPR3Q14573 2671 aa5.81□□□□□ -1.48
GABRB3-204ENST00000541819 PRO2289Q9P1D8 64 aa5.79□□□□□ -1.48
GABRB3-204ENST00000541819 CFAP46Q8IYW2 2715 aa5.78□□□□□ -1.48
GABRB3-204ENST00000541819 KRTAP21-3Q3LHN1 58 aa5.77□□□□□ -1.49
GABRB3-204ENST00000541819 TEP1Q99973 2627 aaKnown RBP5.77□□□□□ -1.49
GABRB3-204ENST00000541819 PRRC2CQ9Y520 2896 aaKnown RBP5.76□□□□□ -1.49
GABRB3-204ENST00000541819 XP32Q5T750 250 aa5.75□□□□□ -1.49
GABRB3-204ENST00000541819 BAHCC1Q9P281 2608 aa5.75□□□□□ -1.49
GABRB3-204ENST00000541819 CEP350Q5VT06 3117 aa5.75□□□□□ -1.49
GABRB3-204ENST00000541819 KRTAP10-10P60014 251 aa5.74□□□□□ -1.49
GABRB3-204ENST00000541819 TRANK1O15050 2925 aa5.74□□□□□ -1.49
GABRB3-204ENST00000541819 HTTP42858 3142 aa5.71□□□□□ -1.5
GABRB3-204ENST00000541819 P0C880 135 aa5.7□□□□□ -1.5
GABRB3-204ENST00000541819 TPRXLQ17RH7 258 aa5.67□□□□□ -1.5
GABRB3-204ENST00000541819 NBEAL1Q6ZS30 2694 aa5.67□□□□□ -1.5
GABRB3-204ENST00000541819 C5orf42Q9H799 3197 aa5.66□□□□□ -1.5
GABRB3-204ENST00000541819 NOTCH1P46531 2555 aa5.65□□□□□ -1.51
GABRB3-204ENST00000541819 UTRNP46939 3433 aa5.63□□□□□ -1.51
GABRB3-204ENST00000541819 TEX15Q9BXT5 2789 aa5.63□□□□□ -1.51
GABRB3-204ENST00000541819 KRTAP1-4P0C5Y4 121 aa5.6□□□□□ -1.51
GABRB3-204ENST00000541819 COL6A5A8TX70 2615 aa5.6□□□□□ -1.51
GABRB3-204ENST00000541819 H0YAA0 97 aa5.59□□□□□ -1.51
GABRB3-204ENST00000541819 CENPEQ02224 2701 aa5.58□□□□□ -1.52
GABRB3-204ENST00000541819 ZNF292O60281 2723 aa5.57□□□□□ -1.52
GABRB3-204ENST00000541819 STAB2Q8WWQ8 2551 aa5.54□□□□□ -1.52
GABRB3-204ENST00000541819 UNC79Q9P2D8 2635 aa5.53□□□□□ -1.52
GABRB3-204ENST00000541819 AKAP13Q12802 2813 aa5.5□□□□□ -1.53
GABRB3-204ENST00000541819 KRTAP13-3Q3SY46 172 aa5.5□□□□□ -1.53
GABRB3-204ENST00000541819 PCNTO95613 3336 aa5.48□□□□□ -1.53
GABRB3-204ENST00000541819 MGAQ8IWI9 3026 aa5.44□□□□□ -1.54
GABRB3-204ENST00000541819 RANBP2P49792 3224 aaKnown RBP5.43□□□□□ -1.54
GABRB3-204ENST00000541819 CHD6Q8TD26 2715 aa5.43□□□□□ -1.54
GABRB3-204ENST00000541819 GCN1Q92616 2671 aaKnown RBP5.41□□□□□ -1.54
GABRB3-204ENST00000541819 IGSF10Q6WRI0 2623 aa5.4□□□□□ -1.54
GABRB3-204ENST00000541819 A0A0C4DFX4 3053 aa5.4□□□□□ -1.55
GABRB3-204ENST00000541819 MKI67P46013 3256 aaKnown RBP5.39□□□□□ -1.55
GABRB3-204ENST00000541819 CFAP54Q96N23 3096 aa5.35□□□□□ -1.55
GABRB3-204ENST00000541819 KRTAP12-2P59991 146 aa5.35□□□□□ -1.55
GABRB3-204ENST00000541819 LAMA3Q16787 3333 aa5.32□□□□□ -1.56
GABRB3-204ENST00000541819 KRTAP13-4Q3LI77 160 aa5.32□□□□□ -1.56
GABRB3-204ENST00000541819 REV3LO60673 3130 aa5.31□□□□□ -1.56
GABRB3-204ENST00000541819 KMT2BQ9UMN6 2715 aaPredicted RBP5.27□□□□□ -1.57
GABRB3-204ENST00000541819 NSD1Q96L73 2696 aaPredicted RBP5.26□□□□□ -1.57
GABRB3-204ENST00000541819 KRTAP15-1Q3LI76 137 aa5.25□□□□□ -1.57
GABRB3-204ENST00000541819 UBR5O95071 2799 aaPredicted RBP5.25□□□□□ -1.57
GABRB3-204ENST00000541819 BRCA2P51587 3418 aa5.24□□□□□ -1.57
GABRB3-204ENST00000541819 DSPP15924 2871 aaKnown RBP5.24□□□□□ -1.57
GABRB3-204ENST00000541819 WDFY4Q6ZS81 3184 aa5.24□□□□□ -1.57
GABRB3-204ENST00000541819 LAMA2P24043 3122 aaKnown RBP5.24□□□□□ -1.57
GABRB3-204ENST00000541819 TRIOO75962 3097 aa5.23□□□□□ -1.57
GABRB3-204ENST00000541819 MAP1AP78559 2803 aaPredicted RBP5.23□□□□□ -1.57
GABRB3-204ENST00000541819 FRYQ5TBA9 3013 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms