RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 PRLHP81277 87 aa-0.09□□□□□ -2.42
MDM2-227ENST00000540709 DEFB106AQ8N104 65 aa-0.09□□□□□ -2.42
MDM2-227ENST00000540709 KCNQ1DNQ9H478 68 aa-0.09□□□□□ -2.42
MDM2-227ENST00000540709 CFAP43Q8NDM7 1665 aa-0.09□□□□□ -2.42
MDM2-227ENST00000540709 ALMS1Q8TCU4 4167 aa-0.09□□□□□ -2.42
MDM2-227ENST00000540709 LMTK2Q8IWU2 1503 aa-0.09□□□□□ -2.42
MDM2-227ENST00000540709 DEPDC5O75140 1603 aa-0.09□□□□□ -2.42
MDM2-227ENST00000540709 LRP2P98164 4655 aa-0.1□□□□□ -2.42
MDM2-227ENST00000540709 CFAP74Q9C0B2 1584 aa-0.1□□□□□ -2.42
MDM2-227ENST00000540709 MINOS1Q5TGZ0 78 aa-0.1□□□□□ -2.43
MDM2-227ENST00000540709 MAP3K1Q13233 1512 aa-0.1□□□□□ -2.43
MDM2-227ENST00000540709 COL6A3P12111 3177 aa-0.1□□□□□ -2.43
MDM2-227ENST00000540709 PLXNC1O60486 1568 aa-0.11□□□□□ -2.43
MDM2-227ENST00000540709 REV3LO60673 3130 aa-0.11□□□□□ -2.43
MDM2-227ENST00000540709 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.11□□□□□ -2.43
MDM2-227ENST00000540709 S4R3F8 94 aa-0.11□□□□□ -2.43
MDM2-227ENST00000540709 HECTD4Q9Y4D8 3996 aa-0.11□□□□□ -2.43
MDM2-227ENST00000540709 WIZO95785 1651 aa-0.11□□□□□ -2.43
MDM2-227ENST00000540709 DUOX2Q9NRD8 1548 aa-0.12□□□□□ -2.43
MDM2-227ENST00000540709 SVEP1Q4LDE5 3571 aa-0.12□□□□□ -2.43
MDM2-227ENST00000540709 DSTQ03001 7570 aaKnown RBP-0.12□□□□□ -2.43
MDM2-227ENST00000540709 MUC2Q02817 5179 aa-0.12□□□□□ -2.43
MDM2-227ENST00000540709 SPRR2EP22531 72 aa-0.12□□□□□ -2.43
MDM2-227ENST00000540709 FCER1GP30273 86 aa-0.12□□□□□ -2.43
MDM2-227ENST00000540709 WT1-ASQ06250 92 aa-0.12□□□□□ -2.43
MDM2-227ENST00000540709 DIP2AQ14689 1571 aa-0.12□□□□□ -2.43
MDM2-227ENST00000540709 SPTBN4Q9H254 2564 aa-0.12□□□□□ -2.43
MDM2-227ENST00000540709 UGGT2Q9NYU1 1516 aa-0.13□□□□□ -2.43
MDM2-227ENST00000540709 LRP1BQ9NZR2 4599 aa-0.13□□□□□ -2.43
MDM2-227ENST00000540709 ITSN1Q15811 1721 aa-0.13□□□□□ -2.43
MDM2-227ENST00000540709 SRRM2Q9UQ35 2752 aaKnown RBP-0.13□□□□□ -2.43
MDM2-227ENST00000540709 ABCA8O94911 1581 aa-0.13□□□□□ -2.43
MDM2-227ENST00000540709 CD163L1Q9NR16 1453 aa-0.13□□□□□ -2.43
MDM2-227ENST00000540709 SFTA3P0C7M3 94 aa-0.13□□□□□ -2.43
MDM2-227ENST00000540709 DEFB110Q30KQ9 67 aa-0.13□□□□□ -2.43
MDM2-227ENST00000540709 KRTAP19-8Q3LI54 63 aa-0.13□□□□□ -2.43
MDM2-227ENST00000540709 C6orf48Q9UBA6 75 aa-0.13□□□□□ -2.43
MDM2-227ENST00000540709 TRANK1O15050 2925 aa-0.13□□□□□ -2.43
MDM2-227ENST00000540709 TJP1Q07157 1748 aa-0.13□□□□□ -2.43
MDM2-227ENST00000540709 TENM2Q9NT68 2774 aa-0.13□□□□□ -2.43
MDM2-227ENST00000540709 SETD2Q9BYW2 2564 aaPredicted RBP-0.13□□□□□ -2.43
MDM2-227ENST00000540709 KIAA0586Q9BVV6 1533 aa-0.13□□□□□ -2.43
MDM2-227ENST00000540709 NBASA2RRP1 2371 aa-0.14□□□□□ -2.43
MDM2-227ENST00000540709 AKAP13Q12802 2813 aa-0.14□□□□□ -2.43
MDM2-227ENST00000540709 LINC01549A6NIU2 74 aa-0.14□□□□□ -2.43
MDM2-227ENST00000540709 NCBP2-AS2Q69YL0 99 aa-0.14□□□□□ -2.43
MDM2-227ENST00000540709 NRAPQ86VF7 1730 aa-0.14□□□□□ -2.43
MDM2-227ENST00000540709 MYO5CQ9NQX4 1742 aa-0.14□□□□□ -2.43
MDM2-227ENST00000540709 THOC2Q8NI27 1593 aaKnown RBP-0.15□□□□□ -2.43
MDM2-227ENST00000540709 MUC12Q9UKN1 5478 aa-0.15□□□□□ -2.43
MDM2-227ENST00000540709 NBEAL1Q6ZS30 2694 aa-0.15□□□□□ -2.43
MDM2-227ENST00000540709 H3BUA1 57 aa-0.15□□□□□ -2.43
MDM2-227ENST00000540709 TNRC18O15417 2968 aaPredicted RBP-0.15□□□□□ -2.43
MDM2-227ENST00000540709 RPS27P42677 84 aaKnown RBP-0.15□□□□□ -2.43
MDM2-227ENST00000540709 DEFB114Q30KQ6 69 aa-0.15□□□□□ -2.43
MDM2-227ENST00000540709 RPS27LQ71UM5 84 aaKnown RBP-0.15□□□□□ -2.43
MDM2-227ENST00000540709 ABCC6O95255 1503 aa-0.15□□□□□ -2.43
MDM2-227ENST00000540709 PRKDCP78527 4128 aaKnown RBP-0.15□□□□□ -2.43
MDM2-227ENST00000540709 SONP18583 2426 aaKnown RBP-0.15□□□□□ -2.43
MDM2-227ENST00000540709 CDC42BPGQ6DT37 1551 aa-0.15□□□□□ -2.43
MDM2-227ENST00000540709 DNMBPQ6XZF7 1577 aa-0.15□□□□□ -2.43
MDM2-227ENST00000540709 PRRC2CQ9Y520 2896 aaKnown RBP-0.16□□□□□ -2.43
MDM2-227ENST00000540709 IQGAP3Q86VI3 1631 aa-0.16□□□□□ -2.43
MDM2-227ENST00000540709 ANKRD36CQ5JPF3 1778 aa-0.16□□□□□ -2.43
MDM2-227ENST00000540709 MT1AP04731 61 aa-0.16□□□□□ -2.44
MDM2-227ENST00000540709 MAP1AP78559 2803 aaPredicted RBP-0.16□□□□□ -2.44
MDM2-227ENST00000540709 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.16□□□□□ -2.44
MDM2-227ENST00000540709 HECTD1Q9ULT8 2610 aa-0.17□□□□□ -2.44
MDM2-227ENST00000540709 ASXL1Q8IXJ9 1541 aa-0.17□□□□□ -2.44
MDM2-227ENST00000540709 ZC3H13Q5T200 1668 aaKnown RBP-0.17□□□□□ -2.44
MDM2-227ENST00000540709 CREBBPQ92793 2442 aa-0.17□□□□□ -2.44
MDM2-227ENST00000540709 K7EMI3 77 aa-0.17□□□□□ -2.44
MDM2-227ENST00000540709 M0R1W7 72 aa-0.17□□□□□ -2.44
MDM2-227ENST00000540709 LRRIQ1Q96JM4 1722 aa-0.17□□□□□ -2.44
MDM2-227ENST00000540709 SPRR2FQ96RM1 72 aa-0.17□□□□□ -2.44
MDM2-227ENST00000540709 NMES1Q9C002 83 aa-0.17□□□□□ -2.44
MDM2-227ENST00000540709 ABRACLQ9P1F3 81 aa-0.17□□□□□ -2.44
MDM2-227ENST00000540709 SCRIBQ14160 1630 aa-0.17□□□□□ -2.44
MDM2-227ENST00000540709 PDZD2O15018 2839 aa-0.18□□□□□ -2.44
MDM2-227ENST00000540709 IGLV5-48A0A075B6I7 105 aa-0.18□□□□□ -2.44
MDM2-227ENST00000540709 SERF2P84101 59 aa-0.18□□□□□ -2.44
MDM2-227ENST00000540709 NOP10Q9NPE3 64 aaKnown RBP-0.18□□□□□ -2.44
MDM2-227ENST00000540709 ABCA9Q8IUA7 1624 aa-0.18□□□□□ -2.44
MDM2-227ENST00000540709 SPG11Q96JI7 2443 aa-0.18□□□□□ -2.44
MDM2-227ENST00000540709 PARP4Q9UKK3 1724 aaKnown RBP-0.18□□□□□ -2.44
MDM2-227ENST00000540709 INO80Q9ULG1 1556 aaPredicted RBP-0.19□□□□□ -2.44
MDM2-227ENST00000540709 DSPP15924 2871 aaKnown RBP-0.19□□□□□ -2.44
MDM2-227ENST00000540709 PKHD1P08F94 4074 aa-0.19□□□□□ -2.44
MDM2-227ENST00000540709 STAB2Q8WWQ8 2551 aa-0.19□□□□□ -2.44
MDM2-227ENST00000540709 RNF17Q9BXT8 1623 aaKnown RBP-0.19□□□□□ -2.44
MDM2-227ENST00000540709 MMP24-AS1A0A0U1RRL7 71 aa-0.19□□□□□ -2.44
MDM2-227ENST00000540709 S100ZQ8WXG8 99 aa-0.19□□□□□ -2.44
MDM2-227ENST00000540709 KIF1AQ12756 1690 aa-0.19□□□□□ -2.44
MDM2-227ENST00000540709 MACF1Q9UPN3 7388 aaKnown RBP-0.19□□□□□ -2.44
MDM2-227ENST00000540709 CUBNO60494 3623 aa-0.2□□□□□ -2.44
MDM2-227ENST00000540709 DMXL1Q9Y485 3027 aa-0.2□□□□□ -2.44
MDM2-227ENST00000540709 NF1P21359 2839 aa-0.2□□□□□ -2.44
MDM2-227ENST00000540709 TOGARAM1Q9Y4F4 1720 aa-0.2□□□□□ -2.44
MDM2-227ENST00000540709 A0A087WWC5 75 aa-0.2□□□□□ -2.44
MDM2-227ENST00000540709 KRTAP20-2Q3LI61 65 aa-0.2□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms