RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 ZCCHC13Q8WW36 166 aaKnown RBP3.24□□□□□ -1.89
LRP6-203ENST00000538239 SPTBN5Q9NRC6 3674 aaKnown RBP3.24□□□□□ -1.89
LRP6-203ENST00000538239 PRO0628Q9UI54 55 aa3.24□□□□□ -1.89
LRP6-203ENST00000538239 PANO1I0J062 215 aa3.24□□□□□ -1.89
LRP6-203ENST00000538239 SEC61BP60468 96 aaKnown RBP3.24□□□□□ -1.89
LRP6-203ENST00000538239 CRIPTQ9P021 101 aa3.24□□□□□ -1.89
LRP6-203ENST00000538239 S4R3F8 94 aa3.24□□□□□ -1.89
LRP6-203ENST00000538239 SPRR1AP35321 89 aa3.24□□□□□ -1.89
LRP6-203ENST00000538239 BAHCC1Q9P281 2608 aa3.23□□□□□ -1.89
LRP6-203ENST00000538239 Q6ZR54 194 aa3.23□□□□□ -1.89
LRP6-203ENST00000538239 RPS28P62857 69 aaKnown RBP3.22□□□□□ -1.89
LRP6-203ENST00000538239 KLKP1Q107X0 134 aa3.22□□□□□ -1.89
LRP6-203ENST00000538239 COL6A3P12111 3177 aa3.22□□□□□ -1.89
LRP6-203ENST00000538239 HRES1P13985 223 aa3.22□□□□□ -1.89
LRP6-203ENST00000538239 CYP4F30PQ9H0H9 118 aa3.21□□□□□ -1.9
LRP6-203ENST00000538239 MMP24-AS1A0A0U1RRL7 71 aa3.21□□□□□ -1.9
LRP6-203ENST00000538239 CAMK2N1Q7Z7J9 78 aa3.21□□□□□ -1.9
LRP6-203ENST00000538239 H7BZZ5 65 aa3.21□□□□□ -1.9
LRP6-203ENST00000538239 A0A0C4DFX4 3053 aa3.2□□□□□ -1.9
LRP6-203ENST00000538239 TNRC18O15417 2968 aaPredicted RBP3.2□□□□□ -1.9
LRP6-203ENST00000538239 DSPP15924 2871 aaKnown RBP3.2□□□□□ -1.9
LRP6-203ENST00000538239 OXTP01178 125 aa3.2□□□□□ -1.9
LRP6-203ENST00000538239 SPANXA2-OT1Q8N9U9 137 aa3.2□□□□□ -1.9
LRP6-203ENST00000538239 CSAG1Q6PB30 78 aa3.19□□□□□ -1.9
LRP6-203ENST00000538239 Q8N9P0 234 aaPredicted RBP3.19□□□□□ -1.9
LRP6-203ENST00000538239 TEP1Q99973 2627 aaKnown RBP3.19□□□□□ -1.9
LRP6-203ENST00000538239 SPINK7P58062 85 aa3.19□□□□□ -1.9
LRP6-203ENST00000538239 CENPEQ02224 2701 aa3.19□□□□□ -1.9
LRP6-203ENST00000538239 IGSF10Q6WRI0 2623 aa3.19□□□□□ -1.9
LRP6-203ENST00000538239 TEX15Q9BXT5 2789 aa3.19□□□□□ -1.9
LRP6-203ENST00000538239 VPS13AQ96RL7 3174 aa3.19□□□□□ -1.9
LRP6-203ENST00000538239 SPRR1BP22528 89 aa3.19□□□□□ -1.9
LRP6-203ENST00000538239 VCANP13611 3396 aa3.19□□□□□ -1.9
LRP6-203ENST00000538239 OCR1Q9BZK8 76 aa3.19□□□□□ -1.9
LRP6-203ENST00000538239 CDC42SE1Q9NRR8 79 aa3.18□□□□□ -1.9
LRP6-203ENST00000538239 LAMA1P25391 3075 aa3.18□□□□□ -1.9
LRP6-203ENST00000538239 KRTAP21-3Q3LHN1 58 aa3.18□□□□□ -1.9
LRP6-203ENST00000538239 Q5W150 140 aa3.18□□□□□ -1.9
LRP6-203ENST00000538239 A0A087X002 238 aa3.17□□□□□ -1.9
LRP6-203ENST00000538239 LINC00483Q53H64 154 aa3.17□□□□□ -1.9
LRP6-203ENST00000538239 LINC00472Q9H8W2 130 aa3.17□□□□□ -1.9
LRP6-203ENST00000538239 A0A1B0GU33 70 aa3.15□□□□□ -1.9
LRP6-203ENST00000538239 FP248Q71RG6 208 aaPredicted RBP3.15□□□□□ -1.9
LRP6-203ENST00000538239 Q6ZRN7 208 aaPredicted RBP3.15□□□□□ -1.91
LRP6-203ENST00000538239 KRTAP11-1Q8IUC1 163 aa3.13□□□□□ -1.91
LRP6-203ENST00000538239 EYSQ5T1H1 3165 aa3.13□□□□□ -1.91
LRP6-203ENST00000538239 CHD6Q8TD26 2715 aa3.13□□□□□ -1.91
LRP6-203ENST00000538239 R4GN34 69 aa3.13□□□□□ -1.91
LRP6-203ENST00000538239 FRYQ5TBA9 3013 aa3.12□□□□□ -1.91
LRP6-203ENST00000538239 USP34Q70CQ2 3546 aa3.12□□□□□ -1.91
LRP6-203ENST00000538239 KRTAP4-16G5E9R7 235 aaPredicted RBP3.11□□□□□ -1.91
LRP6-203ENST00000538239 UNC79Q9P2D8 2635 aa3.11□□□□□ -1.91
LRP6-203ENST00000538239 COL6A5A8TX70 2615 aa3.11□□□□□ -1.91
LRP6-203ENST00000538239 ITPR2Q14571 2701 aa3.1□□□□□ -1.91
LRP6-203ENST00000538239 LCA10Q71F78 164 aa3.09□□□□□ -1.91
LRP6-203ENST00000538239 DMAC1Q96GE9 116 aa3.09□□□□□ -1.91
LRP6-203ENST00000538239 M0QZ58 72 aa3.09□□□□□ -1.91
LRP6-203ENST00000538239 SETXQ7Z333 2677 aaKnown RBP3.09□□□□□ -1.91
LRP6-203ENST00000538239 BOD1L1Q8NFC6 3051 aa3.09□□□□□ -1.91
LRP6-203ENST00000538239 LRBAP50851 2863 aa3.09□□□□□ -1.92
LRP6-203ENST00000538239 DMXL2Q8TDJ6 3036 aa3.08□□□□□ -1.92
LRP6-203ENST00000538239 ADM2Q7Z4H4 148 aa3.08□□□□□ -1.92
LRP6-203ENST00000538239 FREM2Q5SZK8 3169 aa3.08□□□□□ -1.92
LRP6-203ENST00000538239 FRYLO94915 3013 aa3.08□□□□□ -1.92
LRP6-203ENST00000538239 Q1T7F1 81 aa3.07□□□□□ -1.92
LRP6-203ENST00000538239 KRTAP7-1Q8IUC3 87 aa3.07□□□□□ -1.92
LRP6-203ENST00000538239 SPEGQ15772 3267 aa3.07□□□□□ -1.92
LRP6-203ENST00000538239 ATMQ13315 3056 aa3.07□□□□□ -1.92
LRP6-203ENST00000538239 PLAC4Q8WY50 150 aa3.07□□□□□ -1.92
LRP6-203ENST00000538239 NOTCH2NLQ7Z3S9 236 aa3.07□□□□□ -1.92
LRP6-203ENST00000538239 KRTAP13-2Q52LG2 175 aa3.06□□□□□ -1.92
LRP6-203ENST00000538239 GCN1Q92616 2671 aaKnown RBP3.06□□□□□ -1.92
LRP6-203ENST00000538239 CFAP47Q6ZTR5 3102 aa3.06□□□□□ -1.92
LRP6-203ENST00000538239 CRYBG3Q68DQ2 2970 aa3.06□□□□□ -1.92
LRP6-203ENST00000538239 KMT2BQ9UMN6 2715 aaPredicted RBP3.05□□□□□ -1.92
LRP6-203ENST00000538239 COL12A1Q99715 3063 aa3.05□□□□□ -1.92
LRP6-203ENST00000538239 REV3LO60673 3130 aa3.05□□□□□ -1.92
LRP6-203ENST00000538239 UTP20O75691 2785 aaKnown RBP3.05□□□□□ -1.92
LRP6-203ENST00000538239 STAB1Q9NY15 2570 aa3.05□□□□□ -1.92
LRP6-203ENST00000538239 LINC01558Q9Y6Z2 57 aa3.05□□□□□ -1.92
LRP6-203ENST00000538239 KTN1-AS1Q86SY8 53 aa3.04□□□□□ -1.92
LRP6-203ENST00000538239 KALRNO60229 2985 aa3.04□□□□□ -1.92
LRP6-203ENST00000538239 DMXL1Q9Y485 3027 aa3.04□□□□□ -1.92
LRP6-203ENST00000538239 Q75L30 129 aa3.04□□□□□ -1.92
LRP6-203ENST00000538239 MAP1AP78559 2803 aaPredicted RBP3.04□□□□□ -1.92
LRP6-203ENST00000538239 RPS29P62273 56 aaKnown RBP3.04□□□□□ -1.92
LRP6-203ENST00000538239 NBEAL2Q6ZNJ1 2754 aa3.04□□□□□ -1.92
LRP6-203ENST00000538239 CYSTM1Q9H1C7 97 aa3.04□□□□□ -1.92
LRP6-203ENST00000538239 H1FX-AS1Q4G0G2 97 aa3.03□□□□□ -1.92
LRP6-203ENST00000538239 LUZP6Q538Z0 58 aa3.03□□□□□ -1.93
LRP6-203ENST00000538239 MYO15AQ9UKN7 3530 aa3.02□□□□□ -1.93
LRP6-203ENST00000538239 NOTCH1P46531 2555 aa3.02□□□□□ -1.93
LRP6-203ENST00000538239 NBEAL1Q6ZS30 2694 aa3.02□□□□□ -1.93
LRP6-203ENST00000538239 RYR1P21817 5038 aa3.02□□□□□ -1.93
LRP6-203ENST00000538239 SPATA8Q6RVD6 105 aa3.02□□□□□ -1.93
LRP6-203ENST00000538239 ADGRG4Q8IZF6 3080 aa3.01□□□□□ -1.93
LRP6-203ENST00000538239 RPL37P61927 97 aaKnown RBP3.01□□□□□ -1.93
LRP6-203ENST00000538239 KRTAP13-1Q8IUC0 172 aa3.01□□□□□ -1.93
LRP6-203ENST00000538239 ASB16-AS1Q495Z4 193 aa3.01□□□□□ -1.93
LRP6-203ENST00000538239 C20orf166-AS1Q96NR2 134 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 558.8 ms