RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 PKIGQ9Y2B9 76 aa7.66□□□□□ -1.18
CPSF7-218ENST00000537641 HUWE1Q7Z6Z7 4374 aaKnown RBP7.65□□□□□ -1.18
CPSF7-218ENST00000537641 H3BPC8 53 aa7.65□□□□□ -1.18
CPSF7-218ENST00000537641 DNAH1Q9P2D7 4330 aa7.64□□□□□ -1.19
CPSF7-218ENST00000537641 A0A087WSZ3 146 aa7.64□□□□□ -1.19
CPSF7-218ENST00000537641 TRAV22A0A0B4J277 110 aa7.64□□□□□ -1.19
CPSF7-218ENST00000537641 C16orf90A8MZG2 172 aa7.64□□□□□ -1.19
CPSF7-218ENST00000537641 KRTAP29-1A8MX34 341 aaPredicted RBP7.63□□□□□ -1.19
CPSF7-218ENST00000537641 C1orf195Q5TG92 126 aa7.63□□□□□ -1.19
CPSF7-218ENST00000537641 WFDC13Q8IUB5 93 aa7.63□□□□□ -1.19
CPSF7-218ENST00000537641 SPRR1BP22528 89 aa7.62□□□□□ -1.19
CPSF7-218ENST00000537641 V9GYY9 64 aa7.62□□□□□ -1.19
CPSF7-218ENST00000537641 A0A096LNI7 61 aa7.61□□□□□ -1.19
CPSF7-218ENST00000537641 UBE2AP49459 152 aa7.61□□□□□ -1.19
CPSF7-218ENST00000537641 CNBPP62633 177 aaKnown RBP7.61□□□□□ -1.19
CPSF7-218ENST00000537641 PRLHP81277 87 aa7.61□□□□□ -1.19
CPSF7-218ENST00000537641 SPANXA2-OT1Q8N9U9 137 aa7.61□□□□□ -1.19
CPSF7-218ENST00000537641 PRR15Q8IV56 129 aa7.61□□□□□ -1.19
CPSF7-218ENST00000537641 A0A0G2JQZ4 141 aa7.59□□□□□ -1.19
CPSF7-218ENST00000537641 A0A1W2PNN7 141 aa7.59□□□□□ -1.19
CPSF7-218ENST00000537641 H0Y9J4 135 aa7.59□□□□□ -1.19
CPSF7-218ENST00000537641 MGAM2Q2M2H8 2515 aa7.58□□□□□ -1.2
CPSF7-218ENST00000537641 DEFB116Q30KQ4 102 aa7.58□□□□□ -1.2
CPSF7-218ENST00000537641 LRCOL1A6NCL2 159 aa7.58□□□□□ -1.2
CPSF7-218ENST00000537641 H0Y9P7 68 aa7.58□□□□□ -1.2
CPSF7-218ENST00000537641 CASC2Q6XLA1 102 aa7.58□□□□□ -1.2
CPSF7-218ENST00000537641 LINC00208Q96KT6 92 aa7.58□□□□□ -1.2
CPSF7-218ENST00000537641 B9D2Q9BPU9 175 aa7.58□□□□□ -1.2
CPSF7-218ENST00000537641 A8MWP4 228 aa7.57□□□□□ -1.2
CPSF7-218ENST00000537641 IGKV2-24A0A0C4DH68 120 aa7.56□□□□□ -1.2
CPSF7-218ENST00000537641 RPL37AP61513 92 aaKnown RBP7.56□□□□□ -1.2
CPSF7-218ENST00000537641 PRR4Q16378 134 aa7.55□□□□□ -1.2
CPSF7-218ENST00000537641 C14orf177Q52M58 125 aa7.55□□□□□ -1.2
CPSF7-218ENST00000537641 LINC00472Q9H8W2 130 aa7.55□□□□□ -1.2
CPSF7-218ENST00000537641 KRTAP1-5Q9BYS1 174 aa7.54□□□□□ -1.2
CPSF7-218ENST00000537641 APLNQ9ULZ1 77 aa7.54□□□□□ -1.2
CPSF7-218ENST00000537641 COL7A1Q02388 2944 aa7.53□□□□□ -1.2
CPSF7-218ENST00000537641 STAB2Q8WWQ8 2551 aa7.53□□□□□ -1.2
CPSF7-218ENST00000537641 UBE2DNLQ8IWF7 75 aa7.53□□□□□ -1.2
CPSF7-218ENST00000537641 MDFIQ99750 246 aa7.52□□□□□ -1.2
CPSF7-218ENST00000537641 C9orf163Q8N9P6 203 aa7.52□□□□□ -1.21
CPSF7-218ENST00000537641 PSPHP1O15172 72 aa7.51□□□□□ -1.21
CPSF7-218ENST00000537641 PHF5AQ7RTV0 110 aaKnown RBP7.51□□□□□ -1.21
CPSF7-218ENST00000537641 DNAH9Q9NYC9 4486 aa7.5□□□□□ -1.21
CPSF7-218ENST00000537641 MMP24-AS1A0A0U1RRL7 71 aa7.49□□□□□ -1.21
CPSF7-218ENST00000537641 LIMD2Q9BT23 127 aa7.49□□□□□ -1.21
CPSF7-218ENST00000537641 DYNC2H1Q8NCM8 4307 aaKnown RBP7.49□□□□□ -1.21
CPSF7-218ENST00000537641 KRTAP11-1Q8IUC1 163 aa7.48□□□□□ -1.21
CPSF7-218ENST00000537641 A8MUN3 132 aa7.47□□□□□ -1.21
CPSF7-218ENST00000537641 Q5VV11 94 aa7.47□□□□□ -1.21
CPSF7-218ENST00000537641 Q8N9P0 234 aaPredicted RBP7.47□□□□□ -1.21
CPSF7-218ENST00000537641 NUPR2A6NF83 97 aa7.46□□□□□ -1.22
CPSF7-218ENST00000537641 CHTF8P0CG12 524 aa7.45□□□□□ -1.22
CPSF7-218ENST00000537641 MOBPQ13875 183 aa7.45□□□□□ -1.22
CPSF7-218ENST00000537641 IGLV7-46A0A075B6I9 117 aa7.44□□□□□ -1.22
CPSF7-218ENST00000537641 ASB16-AS1Q495Z4 193 aa7.44□□□□□ -1.22
CPSF7-218ENST00000537641 KRTAP13-1Q8IUC0 172 aa7.44□□□□□ -1.22
CPSF7-218ENST00000537641 TP53AIP1Q9HCN2 124 aa7.44□□□□□ -1.22
CPSF7-218ENST00000537641 LYSTQ99698 3801 aa7.44□□□□□ -1.22
CPSF7-218ENST00000537641 PMAIP1Q13794 54 aa7.43□□□□□ -1.22
CPSF7-218ENST00000537641 NBDYA0A0U1RRE5 68 aa7.42□□□□□ -1.22
CPSF7-218ENST00000537641 COA5Q86WW8 74 aa7.41□□□□□ -1.22
CPSF7-218ENST00000537641 Q96NJ1 140 aa7.41□□□□□ -1.22
CPSF7-218ENST00000537641 DNAH10Q8IVF4 4471 aa7.4□□□□□ -1.22
CPSF7-218ENST00000537641 CSMD3Q7Z407 3707 aa7.4□□□□□ -1.22
CPSF7-218ENST00000537641 Q6ZR54 194 aa7.4□□□□□ -1.23
CPSF7-218ENST00000537641 LOC101927531A0A1B0GV80 90 aa7.39□□□□□ -1.23
CPSF7-218ENST00000537641 Q75L30 129 aa7.39□□□□□ -1.23
CPSF7-218ENST00000537641 PRR15LQ9BU68 103 aa7.39□□□□□ -1.23
CPSF7-218ENST00000537641 C8orf17Q9NRJ1 99 aa7.38□□□□□ -1.23
CPSF7-218ENST00000537641 CHKB-CPT1BH3BT56 60 aa7.38□□□□□ -1.23
CPSF7-218ENST00000537641 LINC00483Q53H64 154 aa7.38□□□□□ -1.23
CPSF7-218ENST00000537641 Q6ZRN7 208 aaPredicted RBP7.37□□□□□ -1.23
CPSF7-218ENST00000537641 DNAH7Q8WXX0 4024 aa7.37□□□□□ -1.23
CPSF7-218ENST00000537641 SEC61GP60059 68 aa7.36□□□□□ -1.23
CPSF7-218ENST00000537641 TENM2Q9NT68 2774 aa7.36□□□□□ -1.23
CPSF7-218ENST00000537641 ZNF706Q9Y5V0 76 aaPredicted RBP7.35□□□□□ -1.23
CPSF7-218ENST00000537641 CD164Q04900 197 aa7.35□□□□□ -1.23
CPSF7-218ENST00000537641 A0A1B0GVX0 72 aa7.34□□□□□ -1.23
CPSF7-218ENST00000537641 IGLV9-49A0A0B4J1Y8 123 aa7.33□□□□□ -1.24
CPSF7-218ENST00000537641 SPACA4Q8TDM5 124 aa7.33□□□□□ -1.24
CPSF7-218ENST00000537641 PLECQ15149 4684 aaKnown RBP7.33□□□□□ -1.24
CPSF7-218ENST00000537641 PCOTHQ58A44 107 aa7.32□□□□□ -1.24
CPSF7-218ENST00000537641 LINC01558Q9Y6Z2 57 aa7.32□□□□□ -1.24
CPSF7-218ENST00000537641 PANO1I0J062 215 aa7.32□□□□□ -1.24
CPSF7-218ENST00000537641 MRPL34Q9BQ48 92 aaKnown RBP7.32□□□□□ -1.24
CPSF7-218ENST00000537641 CDK2AP2O75956 126 aa7.31□□□□□ -1.24
CPSF7-218ENST00000537641 PLAC8Q9NZF1 115 aa7.31□□□□□ -1.24
CPSF7-218ENST00000537641 ATP11AUNQ6ZP68 121 aa7.3□□□□□ -1.24
CPSF7-218ENST00000537641 VPS13DQ5THJ4 4388 aa7.29□□□□□ -1.24
CPSF7-218ENST00000537641 A6NED7 52 aa7.29□□□□□ -1.24
CPSF7-218ENST00000537641 A8MU10 97 aa7.29□□□□□ -1.24
CPSF7-218ENST00000537641 WWC2-AS2Q96NR7 200 aa7.29□□□□□ -1.24
CPSF7-218ENST00000537641 IGHV6-1A0A0B4J1U7 121 aa7.28□□□□□ -1.24
CPSF7-218ENST00000537641 NDUFS5O43920 106 aa7.28□□□□□ -1.24
CPSF7-218ENST00000537641 PRKDCP78527 4128 aaKnown RBP7.28□□□□□ -1.24
CPSF7-218ENST00000537641 CDC42SE1Q9NRR8 79 aa7.27□□□□□ -1.25
CPSF7-218ENST00000537641 A0A087WTM6 91 aa7.27□□□□□ -1.25
CPSF7-218ENST00000537641 LCA10Q71F78 164 aa7.27□□□□□ -1.25
CPSF7-218ENST00000537641 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms