RNA–Protein interactions for RNA: ENST00000536393.5

USP30-208, Transcript of ubiquitin specific peptidase 30, human

TSL 5

Gene USP30, Length 476 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP30-208	ENST00000536393	CASC2	Q6XLA1	102 aa		4.21	□□□□□ -1.74
USP30-208	ENST00000536393	CSMD2	Q7Z408	3487 aa		4.2	□□□□□ -1.74
USP30-208	ENST00000536393	LOC101927531	A0A1B0GV80	90 aa		4.2	□□□□□ -1.74
USP30-208	ENST00000536393	LINC00208	Q96KT6	92 aa		4.2	□□□□□ -1.74
USP30-208	ENST00000536393	LINC00472	Q9H8W2	130 aa		4.2	□□□□□ -1.74
USP30-208	ENST00000536393	MTOR	P42345	2549 aa		4.19	□□□□□ -1.74
USP30-208	ENST00000536393		A0A087WSZ3	146 aa		4.19	□□□□□ -1.74
USP30-208	ENST00000536393		H0Y9P7	68 aa		4.19	□□□□□ -1.74
USP30-208	ENST00000536393	C9orf163	Q8N9P6	203 aa		4.19	□□□□□ -1.74
USP30-208	ENST00000536393	KRTAP4-7	Q9BYR0	210 aa		4.19	□□□□□ -1.74
USP30-208	ENST00000536393	PDZD2	O15018	2839 aa		4.18	□□□□□ -1.74
USP30-208	ENST00000536393	KRTAP10-11	P60412	298 aa		4.18	□□□□□ -1.74
USP30-208	ENST00000536393		Q6ZR54	194 aa		4.18	□□□□□ -1.74
USP30-208	ENST00000536393	KRTAP7-1	Q8IUC3	87 aa		4.18	□□□□□ -1.74
USP30-208	ENST00000536393	ST20-AS1	Q8NBB2	130 aa		4.18	□□□□□ -1.74
USP30-208	ENST00000536393		A0A087X002	238 aa		4.17	□□□□□ -1.74
USP30-208	ENST00000536393	PMAIP1	Q13794	54 aa		4.17	□□□□□ -1.74
USP30-208	ENST00000536393	FAM229B	Q4G0N7	80 aa		4.17	□□□□□ -1.74
USP30-208	ENST00000536393	LINC00483	Q53H64	154 aa		4.17	□□□□□ -1.74
USP30-208	ENST00000536393		Q75L30	129 aa		4.17	□□□□□ -1.74
USP30-208	ENST00000536393	MPLKIP	Q8TAP9	179 aa		4.17	□□□□□ -1.74
USP30-208	ENST00000536393	NF1	P21359	2839 aa		4.17	□□□□□ -1.74
USP30-208	ENST00000536393	ATP11AUN	Q6ZP68	121 aa		4.16	□□□□□ -1.74
USP30-208	ENST00000536393	CENPE	Q02224	2701 aa		4.15	□□□□□ -1.74
USP30-208	ENST00000536393	CD164	Q04900	197 aa		4.15	□□□□□ -1.75
USP30-208	ENST00000536393	SMR3A	Q99954	134 aa		4.15	□□□□□ -1.75
USP30-208	ENST00000536393	GCN1	Q92616	2671 aa	Known RBP	4.14	□□□□□ -1.75
USP30-208	ENST00000536393		A0A096LNI7	61 aa		4.14	□□□□□ -1.75
USP30-208	ENST00000536393	FAM168B	A1KXE4	195 aa		4.14	□□□□□ -1.75
USP30-208	ENST00000536393	NDUFS5	O43920	106 aa		4.14	□□□□□ -1.75
USP30-208	ENST00000536393	LCE4A	Q5TA78	99 aa		4.14	□□□□□ -1.75
USP30-208	ENST00000536393	KRTAP13-1	Q8IUC0	172 aa		4.14	□□□□□ -1.75
USP30-208	ENST00000536393		Q8N9P0	234 aa	Predicted RBP	4.14	□□□□□ -1.75
USP30-208	ENST00000536393	RETN	Q9HD89	108 aa		4.14	□□□□□ -1.75
USP30-208	ENST00000536393	SETD2	Q9BYW2	2564 aa	Predicted RBP	4.14	□□□□□ -1.75
USP30-208	ENST00000536393	ACAN	P16112	2415 aa		4.14	□□□□□ -1.75
USP30-208	ENST00000536393	UNC79	Q9P2D8	2635 aa		4.13	□□□□□ -1.75
USP30-208	ENST00000536393	MMP24-AS1	A0A0U1RRL7	71 aa		4.13	□□□□□ -1.75
USP30-208	ENST00000536393	C8orf87	E5RJ46	101 aa		4.13	□□□□□ -1.75
USP30-208	ENST00000536393	LINC01558	Q9Y6Z2	57 aa		4.13	□□□□□ -1.75
USP30-208	ENST00000536393	NUPR2	A6NF83	97 aa		4.12	□□□□□ -1.75
USP30-208	ENST00000536393	CDK2AP2	O75956	126 aa		4.12	□□□□□ -1.75
USP30-208	ENST00000536393	WFDC13	Q8IUB5	93 aa		4.12	□□□□□ -1.75
USP30-208	ENST00000536393	DNAH1	Q9P2D7	4330 aa		4.12	□□□□□ -1.75
USP30-208	ENST00000536393	PRLH	P81277	87 aa		4.11	□□□□□ -1.75
USP30-208	ENST00000536393		Q5VV11	94 aa		4.11	□□□□□ -1.75
USP30-208	ENST00000536393	CDC42SE1	Q9NRR8	79 aa		4.11	□□□□□ -1.75
USP30-208	ENST00000536393	NSD1	Q96L73	2696 aa	Predicted RBP	4.11	□□□□□ -1.75
USP30-208	ENST00000536393	NIPBL	Q6KC79	2804 aa	eCLIP	4.1	□□□□□ -1.75
USP30-208	ENST00000536393		A0A1B0GVX0	72 aa		4.1	□□□□□ -1.75
USP30-208	ENST00000536393		A0A1W2PNN7	141 aa		4.1	□□□□□ -1.75
USP30-208	ENST00000536393	PHF5A	Q7RTV0	110 aa	Known RBP	4.1	□□□□□ -1.75
USP30-208	ENST00000536393	UBE2DNL	Q8IWF7	75 aa		4.1	□□□□□ -1.75
USP30-208	ENST00000536393	MRPL34	Q9BQ48	92 aa	Known RBP	4.1	□□□□□ -1.75
USP30-208	ENST00000536393	KRTAP4-9	Q9BYQ8	210 aa		4.1	□□□□□ -1.75
USP30-208	ENST00000536393	C8orf17	Q9NRJ1	99 aa		4.1	□□□□□ -1.75
USP30-208	ENST00000536393	SEC61G	P60059	68 aa		4.09	□□□□□ -1.75
USP30-208	ENST00000536393	KTN1-AS1	Q86SY8	53 aa		4.09	□□□□□ -1.75
USP30-208	ENST00000536393	COA5	Q86WW8	74 aa		4.09	□□□□□ -1.75
USP30-208	ENST00000536393	PLAC8	Q9NZF1	115 aa		4.09	□□□□□ -1.75
USP30-208	ENST00000536393	DNAH3	Q8TD57	4116 aa		4.09	□□□□□ -1.75
USP30-208	ENST00000536393	IGKV2-24	A0A0C4DH68	120 aa		4.08	□□□□□ -1.76
USP30-208	ENST00000536393	CUBN	O60494	3623 aa		4.08	□□□□□ -1.76
USP30-208	ENST00000536393	KRTAP24-1	Q3LI83	254 aa		4.08	□□□□□ -1.76
USP30-208	ENST00000536393	SPACA4	Q8TDM5	124 aa		4.08	□□□□□ -1.76
USP30-208	ENST00000536393	PRR15L	Q9BU68	103 aa		4.08	□□□□□ -1.76
USP30-208	ENST00000536393	APLN	Q9ULZ1	77 aa		4.08	□□□□□ -1.76
USP30-208	ENST00000536393	NBEAL2	Q6ZNJ1	2754 aa		4.08	□□□□□ -1.76
USP30-208	ENST00000536393	LRCOL1	A6NCL2	159 aa		4.07	□□□□□ -1.76
USP30-208	ENST00000536393	CHKB-CPT1B	H3BT56	60 aa		4.07	□□□□□ -1.76
USP30-208	ENST00000536393	CASC10	Q5T4H9	136 aa		4.07	□□□□□ -1.76
USP30-208	ENST00000536393	SSBP3-AS1	Q7Z2R9	100 aa		4.07	□□□□□ -1.76
USP30-208	ENST00000536393	TEP1	Q99973	2627 aa	Known RBP	4.07	□□□□□ -1.76
USP30-208	ENST00000536393	NBDY	A0A0U1RRE5	68 aa		4.06	□□□□□ -1.76
USP30-208	ENST00000536393		A8MUN3	132 aa		4.06	□□□□□ -1.76
USP30-208	ENST00000536393	ACYP2	P14621	99 aa		4.06	□□□□□ -1.76
USP30-208	ENST00000536393		Q96NJ1	140 aa		4.06	□□□□□ -1.76
USP30-208	ENST00000536393	ITPR2	Q14571	2701 aa		4.05	□□□□□ -1.76
USP30-208	ENST00000536393	KRTAP9-7	A8MTY7	169 aa		4.05	□□□□□ -1.76
USP30-208	ENST00000536393		K7EIL1	84 aa		4.05	□□□□□ -1.76
USP30-208	ENST00000536393	PSPHP1	O15172	72 aa		4.05	□□□□□ -1.76
USP30-208	ENST00000536393	ZNF861P	O60384	105 aa		4.05	□□□□□ -1.76
USP30-208	ENST00000536393	PRR26	Q8N8Z3	221 aa		4.05	□□□□□ -1.76
USP30-208	ENST00000536393	IGLV5-52	A0A0A0MRZ9	124 aa		4.04	□□□□□ -1.76
USP30-208	ENST00000536393		A6NED7	52 aa		4.04	□□□□□ -1.76
USP30-208	ENST00000536393	WWC2-AS2	Q96NR7	200 aa		4.04	□□□□□ -1.76
USP30-208	ENST00000536393	HIVEP1	P15822	2718 aa		4.03	□□□□□ -1.76
USP30-208	ENST00000536393	CHTF8	P0CG12	524 aa		4.03	□□□□□ -1.76
USP30-208	ENST00000536393		Q6ZRN7	208 aa	Predicted RBP	4.03	□□□□□ -1.76
USP30-208	ENST00000536393	FASN	P49327	2511 aa	Known RBP	4.02	□□□□□ -1.77
USP30-208	ENST00000536393	ATR	Q13535	2644 aa		4.02	□□□□□ -1.77
USP30-208	ENST00000536393	VWF	P04275	2813 aa		4.01	□□□□□ -1.77
USP30-208	ENST00000536393	IGHV6-1	A0A0B4J1U7	121 aa		4.01	□□□□□ -1.77
USP30-208	ENST00000536393	KRTAP1-5	Q9BYS1	174 aa		4.01	□□□□□ -1.77
USP30-208	ENST00000536393	HELZ2	Q9BYK8	2649 aa	Known RBP	4.01	□□□□□ -1.77
USP30-208	ENST00000536393	DEFB116	Q30KQ4	102 aa		4	□□□□□ -1.77
USP30-208	ENST00000536393	C7orf65	Q6ZTY9	151 aa		4	□□□□□ -1.77
USP30-208	ENST00000536393	DMAC1	Q96GE9	116 aa		4	□□□□□ -1.77
USP30-208	ENST00000536393	TRRAP	Q9Y4A5	3859 aa		3.99	□□□□□ -1.77
USP30-208	ENST00000536393	ANK2	Q01484	3957 aa		3.99	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms