RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 WNK2Q9Y3S1 2297 aa1.53□□□□□ -2.16
ATPAF1-211ENST00000534216 C5orf42Q9H799 3197 aa1.53□□□□□ -2.17
ATPAF1-211ENST00000534216 TRANK1O15050 2925 aa1.53□□□□□ -2.17
ATPAF1-211ENST00000534216 ZDBF2Q9HCK1 2354 aa1.52□□□□□ -2.17
ATPAF1-211ENST00000534216 H0YAA0 97 aa1.52□□□□□ -2.17
ATPAF1-211ENST00000534216 K7EIM0 57 aa1.52□□□□□ -2.17
ATPAF1-211ENST00000534216 CRCT1Q9UGL9 99 aa1.52□□□□□ -2.17
ATPAF1-211ENST00000534216 DNAH14Q0VDD8 3507 aa1.52□□□□□ -2.17
ATPAF1-211ENST00000534216 J3QKU1 62 aa1.51□□□□□ -2.17
ATPAF1-211ENST00000534216 APELAP0DMC3 54 aa1.51□□□□□ -2.17
ATPAF1-211ENST00000534216 Q6ZRX8 168 aa1.51□□□□□ -2.17
ATPAF1-211ENST00000534216 TP53AIP1Q9HCN2 124 aa1.51□□□□□ -2.17
ATPAF1-211ENST00000534216 CACNA1BQ00975 2339 aa1.51□□□□□ -2.17
ATPAF1-211ENST00000534216 FLG2Q5D862 2391 aaPredicted RBP1.5□□□□□ -2.17
ATPAF1-211ENST00000534216 EYSQ5T1H1 3165 aa1.5□□□□□ -2.17
ATPAF1-211ENST00000534216 MGAQ8IWI9 3026 aa1.5□□□□□ -2.17
ATPAF1-211ENST00000534216 GVQW2A0A096LPI5 108 aaPredicted RBP1.5□□□□□ -2.17
ATPAF1-211ENST00000534216 A8MTW9 85 aa1.5□□□□□ -2.17
ATPAF1-211ENST00000534216 WFDC10BQ8IUB3 73 aa1.5□□□□□ -2.17
ATPAF1-211ENST00000534216 USMG5Q96IX5 58 aa1.5□□□□□ -2.17
ATPAF1-211ENST00000534216 C6orf48Q9UBA6 75 aa1.5□□□□□ -2.17
ATPAF1-211ENST00000534216 VCANP13611 3396 aa1.5□□□□□ -2.17
ATPAF1-211ENST00000534216 USP34Q70CQ2 3546 aa1.5□□□□□ -2.17
ATPAF1-211ENST00000534216 PTPRZ1P23471 2315 aaPredicted RBP1.5□□□□□ -2.17
ATPAF1-211ENST00000534216 RP1L1Q8IWN7 2480 aaPredicted RBP1.49□□□□□ -2.17
ATPAF1-211ENST00000534216 MYO15AQ9UKN7 3530 aa1.49□□□□□ -2.17
ATPAF1-211ENST00000534216 H3BUA1 57 aa1.49□□□□□ -2.17
ATPAF1-211ENST00000534216 H3BUX3 64 aa1.49□□□□□ -2.17
ATPAF1-211ENST00000534216 INE1O15225 51 aa1.49□□□□□ -2.17
ATPAF1-211ENST00000534216 PLAC4Q8WY50 150 aa1.49□□□□□ -2.17
ATPAF1-211ENST00000534216 PRUNE2Q8WUY3 3088 aa1.49□□□□□ -2.17
ATPAF1-211ENST00000534216 DMDP11532 3685 aa1.48□□□□□ -2.17
ATPAF1-211ENST00000534216 TNRC18O15417 2968 aaPredicted RBP1.48□□□□□ -2.17
ATPAF1-211ENST00000534216 MMP24-AS1A0A0U1RRL7 71 aa1.48□□□□□ -2.17
ATPAF1-211ENST00000534216 Q6ZSA8 131 aa1.48□□□□□ -2.17
ATPAF1-211ENST00000534216 TOMM7Q9P0U1 55 aa1.48□□□□□ -2.17
ATPAF1-211ENST00000534216 CACNA1AO00555 2505 aa1.48□□□□□ -2.17
ATPAF1-211ENST00000534216 BAHCC1Q9P281 2608 aa1.47□□□□□ -2.17
ATPAF1-211ENST00000534216 SPTBN1Q01082 2364 aaKnown RBP1.47□□□□□ -2.17
ATPAF1-211ENST00000534216 Q6ZRN7 208 aaPredicted RBP1.47□□□□□ -2.17
ATPAF1-211ENST00000534216 PCNX1Q96RV3 2341 aa1.47□□□□□ -2.17
ATPAF1-211ENST00000534216 GPR98Q8WXG9 6306 aa1.47□□□□□ -2.17
ATPAF1-211ENST00000534216 COL6A3P12111 3177 aa1.47□□□□□ -2.17
ATPAF1-211ENST00000534216 WDFY3Q8IZQ1 3526 aa1.46□□□□□ -2.17
ATPAF1-211ENST00000534216 REV3LO60673 3130 aa1.46□□□□□ -2.17
ATPAF1-211ENST00000534216 A0A0C4DFX4 3053 aa1.46□□□□□ -2.18
ATPAF1-211ENST00000534216 FBN3Q75N90 2809 aa1.46□□□□□ -2.18
ATPAF1-211ENST00000534216 NCOR1O75376 2440 aa1.46□□□□□ -2.18
ATPAF1-211ENST00000534216 LELP1Q5T871 98 aa1.46□□□□□ -2.18
ATPAF1-211ENST00000534216 RHPN1-AS1Q9BWJ2 59 aa1.46□□□□□ -2.18
ATPAF1-211ENST00000534216 C10orf95Q9H7T3 257 aa1.46□□□□□ -2.18
ATPAF1-211ENST00000534216 EP300Q09472 2414 aaPredicted RBP1.46□□□□□ -2.18
ATPAF1-211ENST00000534216 CACNA1GO43497 2377 aa1.45□□□□□ -2.18
ATPAF1-211ENST00000534216 HTN1P15515 57 aa1.45□□□□□ -2.18
ATPAF1-211ENST00000534216 KLK9Q2XQG4 91 aa1.45□□□□□ -2.18
ATPAF1-211ENST00000534216 KRTAP13-4Q3LI77 160 aa1.45□□□□□ -2.18
ATPAF1-211ENST00000534216 CLPSL2Q6UWE3 100 aa1.45□□□□□ -2.18
ATPAF1-211ENST00000534216 MRPL34Q9BQ48 92 aaKnown RBP1.45□□□□□ -2.18
ATPAF1-211ENST00000534216 CACNA1HO95180 2353 aa1.45□□□□□ -2.18
ATPAF1-211ENST00000534216 TTC28Q96AY4 2481 aa1.45□□□□□ -2.18
ATPAF1-211ENST00000534216 MUC3AQ02505 3323 aa1.45□□□□□ -2.18
ATPAF1-211ENST00000534216 ACACAQ13085 2346 aa1.44□□□□□ -2.18
ATPAF1-211ENST00000534216 LAMA1P25391 3075 aa1.43□□□□□ -2.18
ATPAF1-211ENST00000534216 TPRP12270 2363 aaKnown RBP1.43□□□□□ -2.18
ATPAF1-211ENST00000534216 DEFB131AP59861 70 aa1.43□□□□□ -2.18
ATPAF1-211ENST00000534216 DEFB136Q30KP8 78 aa1.43□□□□□ -2.18
ATPAF1-211ENST00000534216 SPEGQ15772 3267 aa1.43□□□□□ -2.18
ATPAF1-211ENST00000534216 PKD1L2Q7Z442 2459 aa1.43□□□□□ -2.18
ATPAF1-211ENST00000534216 TRIOO75962 3097 aa1.43□□□□□ -2.18
ATPAF1-211ENST00000534216 PKDREJQ9NTG1 2253 aa1.42□□□□□ -2.18
ATPAF1-211ENST00000534216 BDP1A6H8Y1 2624 aa1.42□□□□□ -2.18
ATPAF1-211ENST00000534216 WNK1Q9H4A3 2382 aa1.42□□□□□ -2.18
ATPAF1-211ENST00000534216 WDFY4Q6ZS81 3184 aa1.42□□□□□ -2.18
ATPAF1-211ENST00000534216 DEFB130BP0DP73 79 aa1.42□□□□□ -2.18
ATPAF1-211ENST00000534216 DEFB130AP0DP74 79 aa1.42□□□□□ -2.18
ATPAF1-211ENST00000534216 SPINK13Q1W4C9 94 aa1.42□□□□□ -2.18
ATPAF1-211ENST00000534216 H1FX-AS1Q4G0G2 97 aa1.42□□□□□ -2.18
ATPAF1-211ENST00000534216 C10orf99Q6UWK7 81 aa1.42□□□□□ -2.18
ATPAF1-211ENST00000534216 RIF1Q5UIP0 2472 aaKnown RBP1.42□□□□□ -2.18
ATPAF1-211ENST00000534216 PIEZO2Q9H5I5 2752 aa1.42□□□□□ -2.18
ATPAF1-211ENST00000534216 GVINP1Q7Z2Y8 2422 aa1.41□□□□□ -2.18
ATPAF1-211ENST00000534216 FREM2Q5SZK8 3169 aa1.41□□□□□ -2.18
ATPAF1-211ENST00000534216 VPS13AQ96RL7 3174 aa1.41□□□□□ -2.18
ATPAF1-211ENST00000534216 ASPMQ8IZT6 3477 aa1.41□□□□□ -2.18
ATPAF1-211ENST00000534216 FAM186AA6NE01 2351 aa1.41□□□□□ -2.18
ATPAF1-211ENST00000534216 DEFB1P60022 68 aa1.41□□□□□ -2.18
ATPAF1-211ENST00000534216 COX6B2Q6YFQ2 88 aa1.41□□□□□ -2.18
ATPAF1-211ENST00000534216 KRTAP4-1Q9BYQ7 146 aa1.41□□□□□ -2.18
ATPAF1-211ENST00000534216 APC2O95996 2303 aa1.41□□□□□ -2.18
ATPAF1-211ENST00000534216 TENM2Q9NT68 2774 aa1.41□□□□□ -2.18
ATPAF1-211ENST00000534216 UBR4Q5T4S7 5183 aa1.4□□□□□ -2.19
ATPAF1-211ENST00000534216 UNQ6190/PRO20217Q6UXQ8 127 aa1.4□□□□□ -2.19
ATPAF1-211ENST00000534216 SMR3AQ99954 134 aa1.4□□□□□ -2.19
ATPAF1-211ENST00000534216 FRYLO94915 3013 aa1.4□□□□□ -2.19
ATPAF1-211ENST00000534216 SPTA1P02549 2419 aa1.4□□□□□ -2.19
ATPAF1-211ENST00000534216 CSPG4Q6UVK1 2322 aa1.4□□□□□ -2.19
ATPAF1-211ENST00000534216 LAMA5O15230 3695 aa1.4□□□□□ -2.19
ATPAF1-211ENST00000534216 WDR87Q6ZQQ6 2873 aa1.4□□□□□ -2.19
ATPAF1-211ENST00000534216 CELSR3Q9NYQ7 3312 aa1.4□□□□□ -2.19
ATPAF1-211ENST00000534216 OTOGQ6ZRI0 2925 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms