RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 SCGB1D4Q6XE38 83 aa5.94□□□□□ -1.46
CAPN1-225ENST00000533704 PCP2Q8IVA1 136 aa5.94□□□□□ -1.46
CAPN1-225ENST00000533704 ST20-AS1Q8NBB2 130 aa5.94□□□□□ -1.46
CAPN1-225ENST00000533704 A0A0U1RQV1 116 aa5.93□□□□□ -1.46
CAPN1-225ENST00000533704 SPINK1P00995 79 aa5.93□□□□□ -1.46
CAPN1-225ENST00000533704 SSBP3-AS1Q7Z2R9 100 aa5.93□□□□□ -1.46
CAPN1-225ENST00000533704 FP248Q71RG6 208 aaPredicted RBP5.92□□□□□ -1.46
CAPN1-225ENST00000533704 SPANXDQ9BXN6 97 aa5.92□□□□□ -1.46
CAPN1-225ENST00000533704 A0A1B0GWB2 263 aa5.91□□□□□ -1.46
CAPN1-225ENST00000533704 H3BMG7 143 aa5.91□□□□□ -1.46
CAPN1-225ENST00000533704 K7ERJ3 54 aa5.91□□□□□ -1.46
CAPN1-225ENST00000533704 HIST1H4GQ99525 98 aa5.91□□□□□ -1.46
CAPN1-225ENST00000533704 C6orf99Q4VX62 202 aa5.9□□□□□ -1.46
CAPN1-225ENST00000533704 LCE2CQ5TA81 110 aa5.9□□□□□ -1.46
CAPN1-225ENST00000533704 PPDPFLQ8WWR9 84 aa5.9□□□□□ -1.46
CAPN1-225ENST00000533704 COX7BP24311 80 aa5.89□□□□□ -1.47
CAPN1-225ENST00000533704 ETDBQ3ZM63 59 aa5.89□□□□□ -1.47
CAPN1-225ENST00000533704 DHRS4-AS1Q9P1J3 65 aa5.89□□□□□ -1.47
CAPN1-225ENST00000533704 MUC2Q02817 5179 aa5.89□□□□□ -1.47
CAPN1-225ENST00000533704 SLC25A20O43772 301 aa5.88□□□□□ -1.47
CAPN1-225ENST00000533704 KRTAP13-3Q3SY46 172 aa5.88□□□□□ -1.47
CAPN1-225ENST00000533704 Q8N377 158 aa5.88□□□□□ -1.47
CAPN1-225ENST00000533704 DEFB105AQ8NG35 78 aa5.88□□□□□ -1.47
CAPN1-225ENST00000533704 COPS9Q8WXC6 57 aa5.88□□□□□ -1.47
CAPN1-225ENST00000533704 PRO0461Q9UI25 63 aa5.88□□□□□ -1.47
CAPN1-225ENST00000533704 ELOF1P60002 83 aaKnown RBP5.87□□□□□ -1.47
CAPN1-225ENST00000533704 HRCT1Q6UXD1 115 aa5.87□□□□□ -1.47
CAPN1-225ENST00000533704 ANAPC13Q9BS18 74 aa5.87□□□□□ -1.47
CAPN1-225ENST00000533704 IFITM1P13164 125 aa5.86□□□□□ -1.47
CAPN1-225ENST00000533704 RPS29P62273 56 aaKnown RBP5.86□□□□□ -1.47
CAPN1-225ENST00000533704 MUSTN1Q8IVN3 82 aa5.86□□□□□ -1.47
CAPN1-225ENST00000533704 LAMTOR3Q9UHA4 124 aa5.86□□□□□ -1.47
CAPN1-225ENST00000533704 TRBV20-1A0A075B6N2 111 aa5.85□□□□□ -1.47
CAPN1-225ENST00000533704 SPRR1BP22528 89 aa5.85□□□□□ -1.47
CAPN1-225ENST00000533704 Q1RN00 199 aa5.85□□□□□ -1.47
CAPN1-225ENST00000533704 TEN1Q86WV5 123 aa5.85□□□□□ -1.47
CAPN1-225ENST00000533704 MUC17Q685J3 4493 aa5.84□□□□□ -1.47
CAPN1-225ENST00000533704 PSMB2P49721 201 aa5.83□□□□□ -1.48
CAPN1-225ENST00000533704 TRBV7-6A0A0J9YX20 115 aa5.82□□□□□ -1.48
CAPN1-225ENST00000533704 TEX49A0A1B0GTD5 131 aa5.82□□□□□ -1.48
CAPN1-225ENST00000533704 MT-ATP8P03928 68 aa5.82□□□□□ -1.48
CAPN1-225ENST00000533704 LIMD2Q9BT23 127 aa5.82□□□□□ -1.48
CAPN1-225ENST00000533704 TRAV13-2A0A0B4J235 113 aa5.81□□□□□ -1.48
CAPN1-225ENST00000533704 SNCGO76070 127 aa5.81□□□□□ -1.48
CAPN1-225ENST00000533704 H7C2G1 150 aa5.8□□□□□ -1.48
CAPN1-225ENST00000533704 SEC61BP60468 96 aaKnown RBP5.8□□□□□ -1.48
CAPN1-225ENST00000533704 ASB16-AS1Q495Z4 193 aa5.8□□□□□ -1.48
CAPN1-225ENST00000533704 Q6Q795 121 aa5.8□□□□□ -1.48
CAPN1-225ENST00000533704 SMIM11BQ8TCY0 68 aa5.8□□□□□ -1.48
CAPN1-225ENST00000533704 SS18L2Q9UHA2 77 aa5.8□□□□□ -1.48
CAPN1-225ENST00000533704 SCGB1C2P0DMR2 95 aa5.79□□□□□ -1.48
CAPN1-225ENST00000533704 ANKRD29Q8N6D5 301 aa5.79□□□□□ -1.48
CAPN1-225ENST00000533704 A0A0G2JQZ4 141 aa5.78□□□□□ -1.48
CAPN1-225ENST00000533704 A4D1N5 150 aa5.78□□□□□ -1.48
CAPN1-225ENST00000533704 LORP23490 312 aaPredicted RBP5.78□□□□□ -1.48
CAPN1-225ENST00000533704 C9orf92A6NGG3 77 aa5.77□□□□□ -1.49
CAPN1-225ENST00000533704 LINC01547P58512 204 aaPredicted RBP5.77□□□□□ -1.49
CAPN1-225ENST00000533704 SMIM29Q86T20 159 aa5.77□□□□□ -1.49
CAPN1-225ENST00000533704 IGLV5-48A0A075B6I7 105 aa5.76□□□□□ -1.49
CAPN1-225ENST00000533704 TCL1BO95988 128 aa5.76□□□□□ -1.49
CAPN1-225ENST00000533704 NDUFV3P56181 108 aaKnown RBP5.76□□□□□ -1.49
CAPN1-225ENST00000533704 ATXN8Q156A1 80 aa5.76□□□□□ -1.49
CAPN1-225ENST00000533704 XP32Q5T750 250 aa5.76□□□□□ -1.49
CAPN1-225ENST00000533704 A0A0B4J2C4 111 aa5.75□□□□□ -1.49
CAPN1-225ENST00000533704 CD164Q04900 197 aa5.75□□□□□ -1.49
CAPN1-225ENST00000533704 KRTAP4-1Q9BYQ7 146 aa5.75□□□□□ -1.49
CAPN1-225ENST00000533704 PRO1854Q9UHT4 67 aa5.75□□□□□ -1.49
CAPN1-225ENST00000533704 FAT4Q6V0I7 4981 aa5.74□□□□□ -1.49
CAPN1-225ENST00000533704 F8WEM9 126 aa5.74□□□□□ -1.49
CAPN1-225ENST00000533704 C9JAW5 83 aa5.73□□□□□ -1.49
CAPN1-225ENST00000533704 LINC00575Q6W349 94 aa5.72□□□□□ -1.49
CAPN1-225ENST00000533704 Q6ZQY7 126 aa5.72□□□□□ -1.49
CAPN1-225ENST00000533704 FAM240AA0A1B0GVK7 77 aa5.71□□□□□ -1.5
CAPN1-225ENST00000533704 hADV29S1A0JD25 119 aa5.71□□□□□ -1.5
CAPN1-225ENST00000533704 H3BT86 120 aa5.71□□□□□ -1.5
CAPN1-225ENST00000533704 CFC1BP0CG36 223 aa5.71□□□□□ -1.5
CAPN1-225ENST00000533704 CFC1P0CG37 223 aa5.71□□□□□ -1.5
CAPN1-225ENST00000533704 PCOTHQ58A44 107 aa5.7□□□□□ -1.5
CAPN1-225ENST00000533704 C1orf195Q5TG92 126 aa5.7□□□□□ -1.5
CAPN1-225ENST00000533704 CCDC179H3BU77 68 aa5.69□□□□□ -1.5
CAPN1-225ENST00000533704 COX6CP09669 75 aa5.69□□□□□ -1.5
CAPN1-225ENST00000533704 SMIM20Q8N5G0 67 aa5.69□□□□□ -1.5
CAPN1-225ENST00000533704 Q5XG85 94 aa5.68□□□□□ -1.5
CAPN1-225ENST00000533704 KRTAP9-2Q9BYQ4 174 aa5.68□□□□□ -1.5
CAPN1-225ENST00000533704 IGLV8-61A0A075B6I0 122 aa5.67□□□□□ -1.5
CAPN1-225ENST00000533704 TRBV7-7A0A0K0K1E9 115 aa5.67□□□□□ -1.5
CAPN1-225ENST00000533704 ACYP1P07311 99 aa5.67□□□□□ -1.5
CAPN1-225ENST00000533704 Q6JHZ5 121 aa5.66□□□□□ -1.5
CAPN1-225ENST00000533704 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.66□□□□□ -1.5
CAPN1-225ENST00000533704 IGFL1Q6UW32 110 aa5.65□□□□□ -1.5
CAPN1-225ENST00000533704 CLEC2BQ92478 149 aa5.65□□□□□ -1.5
CAPN1-225ENST00000533704 IMUPQ9GZP8 106 aa5.65□□□□□ -1.5
CAPN1-225ENST00000533704 TRIAP1O43715 76 aa5.63□□□□□ -1.51
CAPN1-225ENST00000533704 J3KT08 172 aa5.61□□□□□ -1.51
CAPN1-225ENST00000533704 LST1O00453 97 aa5.61□□□□□ -1.51
CAPN1-225ENST00000533704 FAM236AA0A1B0GUQ0 79 aa5.6□□□□□ -1.51
CAPN1-225ENST00000533704 FAM236BA0A1B0GV22 79 aa5.6□□□□□ -1.51
CAPN1-225ENST00000533704 A0A1B0GX51 115 aa5.6□□□□□ -1.51
CAPN1-225ENST00000533704 UQCRQO14949 82 aa5.6□□□□□ -1.51
CAPN1-225ENST00000533704 RPL37P61927 97 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms