RNA–Protein interactions for RNA: ENST00000533421.2

SF3B2-213, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-213ENST00000533421 A0A0G2JQZ4 141 aa7□□□□□ -1.29
SF3B2-213ENST00000533421 A0A0U1RQV1 116 aa7□□□□□ -1.29
SF3B2-213ENST00000533421 TSTD3H0UI37 97 aa7□□□□□ -1.29
SF3B2-213ENST00000533421 SPRR1BP22528 89 aa7□□□□□ -1.29
SF3B2-213ENST00000533421 Q8N377 158 aa7□□□□□ -1.29
SF3B2-213ENST00000533421 CLEC2BQ92478 149 aa7□□□□□ -1.29
SF3B2-213ENST00000533421 TEX49A0A1B0GTD5 131 aa6.99□□□□□ -1.29
SF3B2-213ENST00000533421 PSMB2P49721 201 aa6.99□□□□□ -1.29
SF3B2-213ENST00000533421 SMIM29Q86T20 159 aa6.99□□□□□ -1.29
SF3B2-213ENST00000533421 NAA38Q9BRA0 125 aaKnown RBP6.99□□□□□ -1.29
SF3B2-213ENST00000533421 IGLV5-48A0A075B6I7 105 aa6.98□□□□□ -1.29
SF3B2-213ENST00000533421 BATFQ16520 125 aa6.98□□□□□ -1.29
SF3B2-213ENST00000533421 HRCT1Q6UXD1 115 aa6.98□□□□□ -1.29
SF3B2-213ENST00000533421 LAMTOR3Q9UHA4 124 aa6.98□□□□□ -1.29
SF3B2-213ENST00000533421 M0R143 59 aa6.95□□□□□ -1.3
SF3B2-213ENST00000533421 H0YGX0 51 aa6.94□□□□□ -1.3
SF3B2-213ENST00000533421 LIMD2Q9BT23 127 aa6.94□□□□□ -1.3
SF3B2-213ENST00000533421 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.93□□□□□ -1.3
SF3B2-213ENST00000533421 A0A1B0GV72 72 aa6.91□□□□□ -1.3
SF3B2-213ENST00000533421 H3BUT2 72 aa6.9□□□□□ -1.3
SF3B2-213ENST00000533421 SCGB1C2P0DMR2 95 aa6.9□□□□□ -1.3
SF3B2-213ENST00000533421 F8WEM9 126 aa6.89□□□□□ -1.31
SF3B2-213ENST00000533421 COX6CP09669 75 aa6.88□□□□□ -1.31
SF3B2-213ENST00000533421 FABP2P12104 132 aa6.88□□□□□ -1.31
SF3B2-213ENST00000533421 CD164Q04900 197 aa6.88□□□□□ -1.31
SF3B2-213ENST00000533421 SNHG12Q9BXW3 62 aa6.88□□□□□ -1.31
SF3B2-213ENST00000533421 SNCGO76070 127 aa6.87□□□□□ -1.31
SF3B2-213ENST00000533421 KRTAP13-3Q3SY46 172 aa6.87□□□□□ -1.31
SF3B2-213ENST00000533421 MUC2Q02817 5179 aa6.87□□□□□ -1.31
SF3B2-213ENST00000533421 PCP4L1A6NKN8 68 aa6.86□□□□□ -1.31
SF3B2-213ENST00000533421 DNAL4O96015 105 aa6.86□□□□□ -1.31
SF3B2-213ENST00000533421 KRTAP9-2Q9BYQ4 174 aa6.86□□□□□ -1.31
SF3B2-213ENST00000533421 A0A1B0GX51 115 aa6.85□□□□□ -1.31
SF3B2-213ENST00000533421 OCIAD2Q56VL3 154 aa6.85□□□□□ -1.31
SF3B2-213ENST00000533421 IGFL1Q6UW32 110 aa6.85□□□□□ -1.31
SF3B2-213ENST00000533421 LST1O00453 97 aa6.84□□□□□ -1.31
SF3B2-213ENST00000533421 TCL1BO95988 128 aa6.84□□□□□ -1.31
SF3B2-213ENST00000533421 NDUFV3P56181 108 aaKnown RBP6.84□□□□□ -1.31
SF3B2-213ENST00000533421 SEC61BP60468 96 aaKnown RBP6.84□□□□□ -1.31
SF3B2-213ENST00000533421 TAX1BP3O14907 124 aa6.83□□□□□ -1.32
SF3B2-213ENST00000533421 PPDPFLQ8WWR9 84 aa6.83□□□□□ -1.32
SF3B2-213ENST00000533421 ORMDL1Q9P0S3 153 aa6.83□□□□□ -1.32
SF3B2-213ENST00000533421 IGLV8-61A0A075B6I0 122 aa6.81□□□□□ -1.32
SF3B2-213ENST00000533421 H3BMG7 143 aa6.81□□□□□ -1.32
SF3B2-213ENST00000533421 TRACP01848 142 aa6.81□□□□□ -1.32
SF3B2-213ENST00000533421 FAT4Q6V0I7 4981 aa6.81□□□□□ -1.32
SF3B2-213ENST00000533421 ASB16-AS1Q495Z4 193 aa6.8□□□□□ -1.32
SF3B2-213ENST00000533421 Q5XG85 94 aa6.8□□□□□ -1.32
SF3B2-213ENST00000533421 C9orf118A6NHY6 69 aa6.79□□□□□ -1.32
SF3B2-213ENST00000533421 Q6JHZ5 121 aa6.79□□□□□ -1.32
SF3B2-213ENST00000533421 ATXN8Q156A1 80 aa6.78□□□□□ -1.32
SF3B2-213ENST00000533421 BAALC-AS2P0C853 105 aa6.77□□□□□ -1.33
SF3B2-213ENST00000533421 MTURNQ8N3F0 131 aa6.77□□□□□ -1.33
SF3B2-213ENST00000533421 TRBV7-7A0A0K0K1E9 115 aa6.76□□□□□ -1.33
SF3B2-213ENST00000533421 TMEM256-PLSCR3K7ERE1 68 aa6.76□□□□□ -1.33
SF3B2-213ENST00000533421 GHRHP01286 108 aa6.76□□□□□ -1.33
SF3B2-213ENST00000533421 XP32Q5T750 250 aa6.76□□□□□ -1.33
SF3B2-213ENST00000533421 A0A1W2PPM0 123 aa6.75□□□□□ -1.33
SF3B2-213ENST00000533421 C1orf195Q5TG92 126 aa6.75□□□□□ -1.33
SF3B2-213ENST00000533421 MUC17Q685J3 4493 aa6.74□□□□□ -1.33
SF3B2-213ENST00000533421 A0A1W2PNM2 257 aa6.74□□□□□ -1.33
SF3B2-213ENST00000533421 C9JAW5 83 aa6.74□□□□□ -1.33
SF3B2-213ENST00000533421 ANKRD29Q8N6D5 301 aa6.74□□□□□ -1.33
SF3B2-213ENST00000533421 UBE2V1Q13404 147 aa6.73□□□□□ -1.33
SF3B2-213ENST00000533421 LYRM7Q5U5X0 104 aa6.73□□□□□ -1.33
SF3B2-213ENST00000533421 C9orf92A6NGG3 77 aa6.72□□□□□ -1.33
SF3B2-213ENST00000533421 COL5A1-AS1Q5SY13 56 aa6.72□□□□□ -1.33
SF3B2-213ENST00000533421 A0A087WSZ3 146 aa6.71□□□□□ -1.34
SF3B2-213ENST00000533421 KRTAP9-6A0A140TA67 174 aa6.71□□□□□ -1.34
SF3B2-213ENST00000533421 H3BQ85 93 aa6.71□□□□□ -1.34
SF3B2-213ENST00000533421 LCE2AQ5TA79 106 aaPredicted RBP6.71□□□□□ -1.34
SF3B2-213ENST00000533421 VPS25Q9BRG1 176 aa6.71□□□□□ -1.34
SF3B2-213ENST00000533421 TRBV20-1A0A075B6N2 111 aa6.7□□□□□ -1.34
SF3B2-213ENST00000533421 TEN1Q86WV5 123 aa6.7□□□□□ -1.34
SF3B2-213ENST00000533421 SPCS1Q9Y6A9 102 aa6.69□□□□□ -1.34
SF3B2-213ENST00000533421 CCKP06307 115 aa6.68□□□□□ -1.34
SF3B2-213ENST00000533421 RBM3P98179 157 aaKnown RBP6.68□□□□□ -1.34
SF3B2-213ENST00000533421 TRBV7-4A0A0J9YYF1 115 aa6.67□□□□□ -1.34
SF3B2-213ENST00000533421 Q6Q795 121 aa6.67□□□□□ -1.34
SF3B2-213ENST00000533421 SS18L2Q9UHA2 77 aa6.67□□□□□ -1.34
SF3B2-213ENST00000533421 DSCR8Q96T75 97 aa6.66□□□□□ -1.34
SF3B2-213ENST00000533421 C14orf132Q9NPU4 83 aa6.65□□□□□ -1.34
SF3B2-213ENST00000533421 DEFB116Q30KQ4 102 aa6.64□□□□□ -1.35
SF3B2-213ENST00000533421 SMCPP49901 116 aaPredicted RBP6.63□□□□□ -1.35
SF3B2-213ENST00000533421 Q96NJ1 140 aa6.63□□□□□ -1.35
SF3B2-213ENST00000533421 PCOTHQ58A44 107 aa6.62□□□□□ -1.35
SF3B2-213ENST00000533421 H3BT86 120 aa6.61□□□□□ -1.35
SF3B2-213ENST00000533421 K7EP34 96 aa6.61□□□□□ -1.35
SF3B2-213ENST00000533421 Q6ZQT0 140 aa6.61□□□□□ -1.35
SF3B2-213ENST00000533421 JMJD7-PLA2G4BH0Y9G9 81 aa6.6□□□□□ -1.35
SF3B2-213ENST00000533421 RPL37P61927 97 aaKnown RBP6.6□□□□□ -1.35
SF3B2-213ENST00000533421 SIGMAR1Q99720 223 aa6.6□□□□□ -1.35
SF3B2-213ENST00000533421 OBSCN-AS1Q96MR7 158 aa6.59□□□□□ -1.35
SF3B2-213ENST00000533421 KRTAP4-1Q9BYQ7 146 aa6.59□□□□□ -1.35
SF3B2-213ENST00000533421 LOC110117498A0A087WWA1 95 aa6.58□□□□□ -1.36
SF3B2-213ENST00000533421 PRO0461Q9UI25 63 aa6.58□□□□□ -1.36
SF3B2-213ENST00000533421 IGKV4-1P06312 121 aa6.57□□□□□ -1.36
SF3B2-213ENST00000533421 DSCR10P59022 87 aa6.56□□□□□ -1.36
SF3B2-213ENST00000533421 LINC00472Q9H8W2 130 aa6.55□□□□□ -1.36
SF3B2-213ENST00000533421 ATP11AUNQ6ZP68 121 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms