RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 ADAMTSL4-AS1Q5T5F5 129 aa6.11□□□□□ -1.43
CMTM1-216ENST00000533078 ATOH7Q8N100 152 aa6.11□□□□□ -1.43
CMTM1-216ENST00000533078 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.1□□□□□ -1.43
CMTM1-216ENST00000533078 C6orf99Q4VX62 202 aa6.1□□□□□ -1.43
CMTM1-216ENST00000533078 SMIM29Q86T20 159 aa6.1□□□□□ -1.43
CMTM1-216ENST00000533078 LINC00308Q8TCZ7 52 aa6.1□□□□□ -1.43
CMTM1-216ENST00000533078 SNHG12Q9BXW3 62 aa6.1□□□□□ -1.43
CMTM1-216ENST00000533078 SSPOA2VEC9 5147 aa6.09□□□□□ -1.43
CMTM1-216ENST00000533078 E9PLD3 99 aa6.09□□□□□ -1.43
CMTM1-216ENST00000533078 EIF4EBP3O60516 100 aaPredicted RBP6.09□□□□□ -1.43
CMTM1-216ENST00000533078 ATP11AUNQ6ZP68 121 aa6.09□□□□□ -1.43
CMTM1-216ENST00000533078 TRBV7-6A0A0J9YX20 115 aa6.07□□□□□ -1.44
CMTM1-216ENST00000533078 A0A1B0GWB2 263 aa6.07□□□□□ -1.44
CMTM1-216ENST00000533078 TIMM17BO60830 172 aa6.07□□□□□ -1.44
CMTM1-216ENST00000533078 COL5A1-AS1Q5SY13 56 aa6.07□□□□□ -1.44
CMTM1-216ENST00000533078 F8WEM9 126 aa6.06□□□□□ -1.44
CMTM1-216ENST00000533078 PCP2Q8IVA1 136 aa6.06□□□□□ -1.44
CMTM1-216ENST00000533078 NHP2Q9NX24 153 aaKnown RBP6.06□□□□□ -1.44
CMTM1-216ENST00000533078 ANKRD39Q53RE8 183 aa6.05□□□□□ -1.44
CMTM1-216ENST00000533078 COPS9Q8WXC6 57 aa6.05□□□□□ -1.44
CMTM1-216ENST00000533078 HIGD1BQ9P298 99 aa6.05□□□□□ -1.44
CMTM1-216ENST00000533078 IGLV5-48A0A075B6I7 105 aa6.04□□□□□ -1.44
CMTM1-216ENST00000533078 A4D1N5 150 aa6.04□□□□□ -1.44
CMTM1-216ENST00000533078 ZNF815PA8K554 130 aa6.03□□□□□ -1.44
CMTM1-216ENST00000533078 LITAFQ99732 161 aa6.03□□□□□ -1.44
CMTM1-216ENST00000533078 A0A0G2JQZ4 141 aa6.02□□□□□ -1.45
CMTM1-216ENST00000533078 A6NDN8 102 aa6.02□□□□□ -1.45
CMTM1-216ENST00000533078 C2orf91Q6ZV80 131 aa6.02□□□□□ -1.45
CMTM1-216ENST00000533078 TRBV20-1A0A075B6N2 111 aa6.01□□□□□ -1.45
CMTM1-216ENST00000533078 A0A1B0GV90 55 aa6.01□□□□□ -1.45
CMTM1-216ENST00000533078 HSD52Q0P140 79 aa6.01□□□□□ -1.45
CMTM1-216ENST00000533078 BVES-AS1Q5T3Y7 98 aa6.01□□□□□ -1.45
CMTM1-216ENST00000533078 Q75L30 129 aa6.01□□□□□ -1.45
CMTM1-216ENST00000533078 OBSCN-AS1Q96MR7 158 aa6.01□□□□□ -1.45
CMTM1-216ENST00000533078 FCGBPQ9Y6R7 5405 aaPredicted RBP5.99□□□□□ -1.45
CMTM1-216ENST00000533078 SCGB1D4Q6XE38 83 aa5.99□□□□□ -1.45
CMTM1-216ENST00000533078 BATFQ16520 125 aa5.98□□□□□ -1.45
CMTM1-216ENST00000533078 Q6JHZ5 121 aa5.98□□□□□ -1.45
CMTM1-216ENST00000533078 TRAV13-2A0A0B4J235 113 aa5.96□□□□□ -1.46
CMTM1-216ENST00000533078 IFITM1P13164 125 aa5.96□□□□□ -1.46
CMTM1-216ENST00000533078 VAMP3Q15836 100 aa5.96□□□□□ -1.46
CMTM1-216ENST00000533078 CLEC2BQ92478 149 aa5.96□□□□□ -1.46
CMTM1-216ENST00000533078 TRBV7-7A0A0K0K1E9 115 aa5.95□□□□□ -1.46
CMTM1-216ENST00000533078 Q6ZVH6 145 aa5.95□□□□□ -1.46
CMTM1-216ENST00000533078 TAX1BP3O14907 124 aa5.94□□□□□ -1.46
CMTM1-216ENST00000533078 Q96NJ1 140 aa5.94□□□□□ -1.46
CMTM1-216ENST00000533078 LST1O00453 97 aa5.93□□□□□ -1.46
CMTM1-216ENST00000533078 CEND1Q8N111 149 aa5.93□□□□□ -1.46
CMTM1-216ENST00000533078 KRTAP9-8Q9BYQ0 159 aa5.93□□□□□ -1.46
CMTM1-216ENST00000533078 TTTY13Q9BZ97 58 aa5.92□□□□□ -1.46
CMTM1-216ENST00000533078 FAM236DA0A1B0GTK5 79 aa5.91□□□□□ -1.46
CMTM1-216ENST00000533078 C9orf118A6NHY6 69 aa5.91□□□□□ -1.46
CMTM1-216ENST00000533078 FAM236CP0DP71 79 aa5.91□□□□□ -1.46
CMTM1-216ENST00000533078 SMIM11BQ8TCY0 68 aa5.91□□□□□ -1.46
CMTM1-216ENST00000533078 TMEM238LA0A1B0GVL6 79 aa5.9□□□□□ -1.46
CMTM1-216ENST00000533078 A6NJY4 79 aa5.9□□□□□ -1.46
CMTM1-216ENST00000533078 UBE2V1Q13404 147 aa5.9□□□□□ -1.46
CMTM1-216ENST00000533078 IGFL1Q6UW32 110 aa5.9□□□□□ -1.46
CMTM1-216ENST00000533078 HIST1H4GQ99525 98 aa5.9□□□□□ -1.46
CMTM1-216ENST00000533078 SS18L2Q9UHA2 77 aa5.9□□□□□ -1.46
CMTM1-216ENST00000533078 hADV29S1A0JD25 119 aa5.89□□□□□ -1.47
CMTM1-216ENST00000533078 OCIAD2Q56VL3 154 aa5.89□□□□□ -1.47
CMTM1-216ENST00000533078 Q6ZQY7 126 aa5.89□□□□□ -1.47
CMTM1-216ENST00000533078 MUSTN1Q8IVN3 82 aa5.89□□□□□ -1.47
CMTM1-216ENST00000533078 LINC00846Q9NV44 126 aa5.89□□□□□ -1.47
CMTM1-216ENST00000533078 FXYD2P54710 66 aa5.88□□□□□ -1.47
CMTM1-216ENST00000533078 C20orf166-AS1Q96NR2 134 aa5.88□□□□□ -1.47
CMTM1-216ENST00000533078 MACF1Q9UPN3 7388 aaKnown RBP5.87□□□□□ -1.47
CMTM1-216ENST00000533078 SYNE2Q8WXH0 6885 aaKnown RBP5.87□□□□□ -1.47
CMTM1-216ENST00000533078 LINC00575Q6W349 94 aa5.87□□□□□ -1.47
CMTM1-216ENST00000533078 GTF2H5Q6ZYL4 71 aa5.86□□□□□ -1.47
CMTM1-216ENST00000533078 KRTAP19-1Q8IUB9 90 aa5.86□□□□□ -1.47
CMTM1-216ENST00000533078 PPDPFLQ8WWR9 84 aa5.86□□□□□ -1.47
CMTM1-216ENST00000533078 A0A1W2PPM0 123 aa5.85□□□□□ -1.47
CMTM1-216ENST00000533078 A8MUU9 505 aa5.85□□□□□ -1.47
CMTM1-216ENST00000533078 FABP2P12104 132 aa5.84□□□□□ -1.47
CMTM1-216ENST00000533078 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.84□□□□□ -1.47
CMTM1-216ENST00000533078 RBM12B-AS1Q9P1G2 102 aa5.84□□□□□ -1.47
CMTM1-216ENST00000533078 H3BUT2 72 aa5.83□□□□□ -1.48
CMTM1-216ENST00000533078 K7EP34 96 aa5.83□□□□□ -1.48
CMTM1-216ENST00000533078 MT2AP02795 61 aa5.83□□□□□ -1.48
CMTM1-216ENST00000533078 KRTAP10-10P60014 251 aa5.83□□□□□ -1.48
CMTM1-216ENST00000533078 A0A0B4J2C4 111 aa5.82□□□□□ -1.48
CMTM1-216ENST00000533078 SNCGO76070 127 aa5.81□□□□□ -1.48
CMTM1-216ENST00000533078 LYRM7Q5U5X0 104 aa5.81□□□□□ -1.48
CMTM1-216ENST00000533078 RAB37Q96AX2 223 aa5.8□□□□□ -1.48
CMTM1-216ENST00000533078 PRO1854Q9UHT4 67 aa5.8□□□□□ -1.48
CMTM1-216ENST00000533078 SPCS1Q9Y6A9 102 aa5.8□□□□□ -1.48
CMTM1-216ENST00000533078 K7ERJ3 54 aa5.79□□□□□ -1.48
CMTM1-216ENST00000533078 LCE2BO14633 110 aa5.79□□□□□ -1.48
CMTM1-216ENST00000533078 TEN1Q86WV5 123 aa5.79□□□□□ -1.48
CMTM1-216ENST00000533078 MT1FP04733 61 aa5.78□□□□□ -1.48
CMTM1-216ENST00000533078 SIGMAR1Q99720 223 aa5.78□□□□□ -1.48
CMTM1-216ENST00000533078 F8W1H4 67 aa5.77□□□□□ -1.49
CMTM1-216ENST00000533078 DSCR10P59022 87 aa5.77□□□□□ -1.49
CMTM1-216ENST00000533078 MTURNQ8N3F0 131 aa5.77□□□□□ -1.49
CMTM1-216ENST00000533078 A0A087WSZ3 146 aa5.76□□□□□ -1.49
CMTM1-216ENST00000533078 LINC00313P59037 77 aa5.75□□□□□ -1.49
CMTM1-216ENST00000533078 KRTAP9-3Q9BYQ3 159 aa5.75□□□□□ -1.49
CMTM1-216ENST00000533078 GHRHP01286 108 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms