RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 KRTAP10-1P60331 282 aa6.58□□□□□ -1.36
COLCA1-203ENST00000532918 SPRR1BP22528 89 aa6.57□□□□□ -1.36
COLCA1-203ENST00000532918 HRES1P13985 223 aa6.56□□□□□ -1.36
COLCA1-203ENST00000532918 KRTAP1-5Q9BYS1 174 aa6.55□□□□□ -1.36
COLCA1-203ENST00000532918 NDUFAF8A1L188 74 aa6.54□□□□□ -1.36
COLCA1-203ENST00000532918 KRTAP10-2P60368 255 aa6.53□□□□□ -1.36
COLCA1-203ENST00000532918 Q6ZR54 194 aa6.52□□□□□ -1.37
COLCA1-203ENST00000532918 S4R3F8 94 aa6.52□□□□□ -1.37
COLCA1-203ENST00000532918 STAB1Q9NY15 2570 aa6.49□□□□□ -1.37
COLCA1-203ENST00000532918 ASB16-AS1Q495Z4 193 aa6.49□□□□□ -1.37
COLCA1-203ENST00000532918 ROMO1P60602 79 aa6.47□□□□□ -1.37
COLCA1-203ENST00000532918 KRTAP26-1Q6PEX3 210 aa6.47□□□□□ -1.37
COLCA1-203ENST00000532918 MMP24-AS1A0A0U1RRL7 71 aa6.46□□□□□ -1.38
COLCA1-203ENST00000532918 UTRNP46939 3433 aa6.46□□□□□ -1.38
COLCA1-203ENST00000532918 BAHCC1Q9P281 2608 aa6.46□□□□□ -1.38
COLCA1-203ENST00000532918 CYSTM1Q9H1C7 97 aa6.46□□□□□ -1.38
COLCA1-203ENST00000532918 BPTFQ12830 3046 aa6.44□□□□□ -1.38
COLCA1-203ENST00000532918 RPL37P61927 97 aaKnown RBP6.41□□□□□ -1.38
COLCA1-203ENST00000532918 PRRC2CQ9Y520 2896 aaKnown RBP6.41□□□□□ -1.38
COLCA1-203ENST00000532918 SETXQ7Z333 2677 aaKnown RBP6.41□□□□□ -1.38
COLCA1-203ENST00000532918 LINC00472Q9H8W2 130 aa6.41□□□□□ -1.38
COLCA1-203ENST00000532918 R4GN34 69 aa6.39□□□□□ -1.39
COLCA1-203ENST00000532918 Q5W150 140 aa6.39□□□□□ -1.39
COLCA1-203ENST00000532918 Q8NDZ9 215 aa6.39□□□□□ -1.39
COLCA1-203ENST00000532918 CEP350Q5VT06 3117 aa6.38□□□□□ -1.39
COLCA1-203ENST00000532918 TEP1Q99973 2627 aaKnown RBP6.37□□□□□ -1.39
COLCA1-203ENST00000532918 ZNF292O60281 2723 aa6.36□□□□□ -1.39
COLCA1-203ENST00000532918 COL6A5A8TX70 2615 aa6.36□□□□□ -1.39
COLCA1-203ENST00000532918 UNC79Q9P2D8 2635 aa6.35□□□□□ -1.39
COLCA1-203ENST00000532918 H1FX-AS1Q4G0G2 97 aa6.35□□□□□ -1.39
COLCA1-203ENST00000532918 RPS29P62273 56 aaKnown RBP6.34□□□□□ -1.39
COLCA1-203ENST00000532918 TEX15Q9BXT5 2789 aa6.33□□□□□ -1.4
COLCA1-203ENST00000532918 FLG2Q5D862 2391 aaPredicted RBP6.32□□□□□ -1.4
COLCA1-203ENST00000532918 DNAH12Q6ZR08 3092 aa6.32□□□□□ -1.4
COLCA1-203ENST00000532918 CENPEQ02224 2701 aa6.3□□□□□ -1.4
COLCA1-203ENST00000532918 PANO1I0J062 215 aa6.3□□□□□ -1.4
COLCA1-203ENST00000532918 CHD9Q3L8U1 2897 aa6.29□□□□□ -1.4
COLCA1-203ENST00000532918 Q6ZRN7 208 aaPredicted RBP6.29□□□□□ -1.4
COLCA1-203ENST00000532918 PLAC4Q8WY50 150 aa6.28□□□□□ -1.4
COLCA1-203ENST00000532918 CHD7Q9P2D1 2997 aa6.27□□□□□ -1.41
COLCA1-203ENST00000532918 KRTAP25-1Q3LHN0 102 aa6.26□□□□□ -1.41
COLCA1-203ENST00000532918 KRTAP4-16G5E9R7 235 aaPredicted RBP6.26□□□□□ -1.41
COLCA1-203ENST00000532918 A0A087X002 238 aa6.25□□□□□ -1.41
COLCA1-203ENST00000532918 IGSF10Q6WRI0 2623 aa6.25□□□□□ -1.41
COLCA1-203ENST00000532918 A6NN06 94 aa6.24□□□□□ -1.41
COLCA1-203ENST00000532918 M0QZ58 72 aa6.23□□□□□ -1.41
COLCA1-203ENST00000532918 SPATA8Q6RVD6 105 aa6.23□□□□□ -1.41
COLCA1-203ENST00000532918 HTTP42858 3142 aa6.21□□□□□ -1.42
COLCA1-203ENST00000532918 TRANK1O15050 2925 aa6.19□□□□□ -1.42
COLCA1-203ENST00000532918 NBEAL1Q6ZS30 2694 aa6.18□□□□□ -1.42
COLCA1-203ENST00000532918 CHD6Q8TD26 2715 aa6.16□□□□□ -1.42
COLCA1-203ENST00000532918 RANBP2P49792 3224 aaKnown RBP6.15□□□□□ -1.42
COLCA1-203ENST00000532918 GCN1Q92616 2671 aaKnown RBP6.15□□□□□ -1.42
COLCA1-203ENST00000532918 C20orf166-AS1Q96NR2 134 aa6.15□□□□□ -1.43
COLCA1-203ENST00000532918 ADM2Q7Z4H4 148 aa6.15□□□□□ -1.43
COLCA1-203ENST00000532918 NOTCH1P46531 2555 aa6.15□□□□□ -1.43
COLCA1-203ENST00000532918 AKAP13Q12802 2813 aa6.12□□□□□ -1.43
COLCA1-203ENST00000532918 C5orf42Q9H799 3197 aa6.11□□□□□ -1.43
COLCA1-203ENST00000532918 NSD1Q96L73 2696 aaPredicted RBP6.1□□□□□ -1.43
COLCA1-203ENST00000532918 KMT2BQ9UMN6 2715 aaPredicted RBP6.1□□□□□ -1.43
COLCA1-203ENST00000532918 PCNTO95613 3336 aa6.1□□□□□ -1.43
COLCA1-203ENST00000532918 ITPR2Q14571 2701 aa6.09□□□□□ -1.43
COLCA1-203ENST00000532918 MGAQ8IWI9 3026 aa6.09□□□□□ -1.44
COLCA1-203ENST00000532918 KRTAP13-2Q52LG2 175 aa6.08□□□□□ -1.44
COLCA1-203ENST00000532918 KRTAP29-1A8MX34 341 aaPredicted RBP6.08□□□□□ -1.44
COLCA1-203ENST00000532918 KRTAP11-1Q8IUC1 163 aa6.07□□□□□ -1.44
COLCA1-203ENST00000532918 KRTAP13-1Q8IUC0 172 aa6.06□□□□□ -1.44
COLCA1-203ENST00000532918 MAP1AP78559 2803 aaPredicted RBP6.04□□□□□ -1.44
COLCA1-203ENST00000532918 DSPP15924 2871 aaKnown RBP6.02□□□□□ -1.45
COLCA1-203ENST00000532918 LAMA3Q16787 3333 aa6.01□□□□□ -1.45
COLCA1-203ENST00000532918 KRTAP7-1Q8IUC3 87 aa6.01□□□□□ -1.45
COLCA1-203ENST00000532918 UBR5O95071 2799 aaPredicted RBP6.01□□□□□ -1.45
COLCA1-203ENST00000532918 NOTCH2NLQ7Z3S9 236 aa6□□□□□ -1.45
COLCA1-203ENST00000532918 A8MUU9 505 aa6□□□□□ -1.45
COLCA1-203ENST00000532918 STAB2Q8WWQ8 2551 aa5.99□□□□□ -1.45
COLCA1-203ENST00000532918 A8MU10 97 aa5.99□□□□□ -1.45
COLCA1-203ENST00000532918 DMBT1Q9UGM3 2413 aaPredicted RBP5.99□□□□□ -1.45
COLCA1-203ENST00000532918 MKI67P46013 3256 aaKnown RBP5.99□□□□□ -1.45
COLCA1-203ENST00000532918 C10orf95Q9H7T3 257 aa5.93□□□□□ -1.46
COLCA1-203ENST00000532918 PP632Q6XCG6 107 aa5.91□□□□□ -1.46
COLCA1-203ENST00000532918 HIVEP1P15822 2718 aa5.91□□□□□ -1.46
COLCA1-203ENST00000532918 BRCA2P51587 3418 aa5.89□□□□□ -1.47
COLCA1-203ENST00000532918 ITPR1Q14643 2758 aa5.88□□□□□ -1.47
COLCA1-203ENST00000532918 USP34Q70CQ2 3546 aa5.87□□□□□ -1.47
COLCA1-203ENST00000532918 NBEAL2Q6ZNJ1 2754 aa5.86□□□□□ -1.47
COLCA1-203ENST00000532918 PRUNE2Q8WUY3 3088 aa5.86□□□□□ -1.47
COLCA1-203ENST00000532918 TPRXLQ17RH7 258 aa5.86□□□□□ -1.47
COLCA1-203ENST00000532918 TENM4Q6N022 2769 aa5.85□□□□□ -1.47
COLCA1-203ENST00000532918 A0A0C4DFX4 3053 aa5.85□□□□□ -1.47
COLCA1-203ENST00000532918 TNP1P09430 55 aa5.84□□□□□ -1.48
COLCA1-203ENST00000532918 XP32Q5T750 250 aa5.83□□□□□ -1.48
COLCA1-203ENST00000532918 KRTAP1-4P0C5Y4 121 aa5.82□□□□□ -1.48
COLCA1-203ENST00000532918 WDFY4Q6ZS81 3184 aa5.8□□□□□ -1.48
COLCA1-203ENST00000532918 FLNCQ14315 2725 aa5.79□□□□□ -1.48
COLCA1-203ENST00000532918 FRYQ5TBA9 3013 aa5.78□□□□□ -1.48
COLCA1-203ENST00000532918 CFAP54Q96N23 3096 aa5.74□□□□□ -1.49
COLCA1-203ENST00000532918 KRTAP23-1A1A580 65 aa5.72□□□□□ -1.49
COLCA1-203ENST00000532918 P0C880 135 aa5.72□□□□□ -1.49
COLCA1-203ENST00000532918 TNRC18O15417 2968 aaPredicted RBP5.72□□□□□ -1.49
COLCA1-203ENST00000532918 UTP20O75691 2785 aaKnown RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms