RNA–Protein interactions for RNA: ENST00000532791.5

FGFR1-238, Transcript of fibroblast growth factor receptor 1, human

APPRIS ALT1 TSL 5 BASIC

Gene FGFR1, Length 5,590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-238	ENST00000532791	KRTAP10-1	P60331	282 aa		11.73	□□□□□ -0.53
FGFR1-238	ENST00000532791	KRTAP26-1	Q6PEX3	210 aa		11.73	□□□□□ -0.53
FGFR1-238	ENST00000532791	CFAP46	Q8IYW2	2715 aa		11.73	□□□□□ -0.53
FGFR1-238	ENST00000532791	STAB1	Q9NY15	2570 aa		11.72	□□□□□ -0.53
FGFR1-238	ENST00000532791	LCE6A	A0A183	80 aa		11.7	□□□□□ -0.54
FGFR1-238	ENST00000532791	KRTAP10-2	P60368	255 aa		11.69	□□□□□ -0.54
FGFR1-238	ENST00000532791	CYSTM1	Q9H1C7	97 aa		11.68	□□□□□ -0.54
FGFR1-238	ENST00000532791		Q5XG85	94 aa		11.67	□□□□□ -0.54
FGFR1-238	ENST00000532791		Q5VV11	94 aa		11.66	□□□□□ -0.54
FGFR1-238	ENST00000532791	FP248	Q71RG6	208 aa	Predicted RBP	11.66	□□□□□ -0.54
FGFR1-238	ENST00000532791	PRAC1	Q96KF2	57 aa		11.66	□□□□□ -0.54
FGFR1-238	ENST00000532791	UTRN	P46939	3433 aa		11.6	□□□□□ -0.55
FGFR1-238	ENST00000532791	CEP350	Q5VT06	3117 aa		11.6	□□□□□ -0.55
FGFR1-238	ENST00000532791	RPL37	P61927	97 aa	Known RBP	11.56	□□□□□ -0.56
FGFR1-238	ENST00000532791		M0QZ58	72 aa		11.55	□□□□□ -0.56
FGFR1-238	ENST00000532791	CENPE	Q02224	2701 aa		11.54	□□□□□ -0.56
FGFR1-238	ENST00000532791	PANO1	I0J062	215 aa		11.51	□□□□□ -0.57
FGFR1-238	ENST00000532791	AKAP13	Q12802	2813 aa		11.5	□□□□□ -0.57
FGFR1-238	ENST00000532791	H1FX-AS1	Q4G0G2	97 aa		11.49	□□□□□ -0.57
FGFR1-238	ENST00000532791	ROMO1	P60602	79 aa		11.48	□□□□□ -0.57
FGFR1-238	ENST00000532791	FLG2	Q5D862	2391 aa	Predicted RBP	11.48	□□□□□ -0.57
FGFR1-238	ENST00000532791	NBEAL1	Q6ZS30	2694 aa		11.48	□□□□□ -0.57
FGFR1-238	ENST00000532791	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	11.47	□□□□□ -0.57
FGFR1-238	ENST00000532791		Q6ZR54	194 aa		11.47	□□□□□ -0.57
FGFR1-238	ENST00000532791	CHD6	Q8TD26	2715 aa		11.46	□□□□□ -0.57
FGFR1-238	ENST00000532791	TEX15	Q9BXT5	2789 aa		11.46	□□□□□ -0.58
FGFR1-238	ENST00000532791		A0A0A0MQY5	61 aa		11.44	□□□□□ -0.58
FGFR1-238	ENST00000532791	TEP1	Q99973	2627 aa	Known RBP	11.43	□□□□□ -0.58
FGFR1-238	ENST00000532791	C5orf42	Q9H799	3197 aa		11.43	□□□□□ -0.58
FGFR1-238	ENST00000532791	CHD7	Q9P2D1	2997 aa		11.42	□□□□□ -0.58
FGFR1-238	ENST00000532791	OXT	P01178	125 aa		11.41	□□□□□ -0.58
FGFR1-238	ENST00000532791	ADM2	Q7Z4H4	148 aa		11.41	□□□□□ -0.58
FGFR1-238	ENST00000532791		A0A087X002	238 aa		11.41	□□□□□ -0.58
FGFR1-238	ENST00000532791	PLAC4	Q8WY50	150 aa		11.38	□□□□□ -0.59
FGFR1-238	ENST00000532791	KRTAP29-1	A8MX34	341 aa	Predicted RBP	11.37	□□□□□ -0.59
FGFR1-238	ENST00000532791	SETX	Q7Z333	2677 aa	Known RBP	11.35	□□□□□ -0.59
FGFR1-238	ENST00000532791	SPATA8	Q6RVD6	105 aa		11.34	□□□□□ -0.59
FGFR1-238	ENST00000532791	COL6A5	A8TX70	2615 aa		11.31	□□□□□ -0.6
FGFR1-238	ENST00000532791	UNC79	Q9P2D8	2635 aa		11.26	□□□□□ -0.61
FGFR1-238	ENST00000532791	GCN1	Q92616	2671 aa	Known RBP	11.26	□□□□□ -0.61
FGFR1-238	ENST00000532791	NOTCH2NL	Q7Z3S9	236 aa		11.26	□□□□□ -0.61
FGFR1-238	ENST00000532791		H3BS24	57 aa		11.25	□□□□□ -0.61
FGFR1-238	ENST00000532791	DMBT1	Q9UGM3	2413 aa	Predicted RBP	11.23	□□□□□ -0.61
FGFR1-238	ENST00000532791	PCNT	O95613	3336 aa		11.23	□□□□□ -0.61
FGFR1-238	ENST00000532791	CHD9	Q3L8U1	2897 aa		11.21	□□□□□ -0.62
FGFR1-238	ENST00000532791	NOTCH1	P46531	2555 aa		11.2	□□□□□ -0.62
FGFR1-238	ENST00000532791	ASB16-AS1	Q495Z4	193 aa		11.19	□□□□□ -0.62
FGFR1-238	ENST00000532791	KRTAP11-1	Q8IUC1	163 aa		11.19	□□□□□ -0.62
FGFR1-238	ENST00000532791	MGA	Q8IWI9	3026 aa		11.19	□□□□□ -0.62
FGFR1-238	ENST00000532791	RPS29	P62273	56 aa	Known RBP	11.18	□□□□□ -0.62
FGFR1-238	ENST00000532791		Q6ZRN7	208 aa	Predicted RBP	11.16	□□□□□ -0.62
FGFR1-238	ENST00000532791	ZNF292	O60281	2723 aa		11.12	□□□□□ -0.63
FGFR1-238	ENST00000532791	CFAP54	Q96N23	3096 aa		11.11	□□□□□ -0.63
FGFR1-238	ENST00000532791	STAB2	Q8WWQ8	2551 aa		11.06	□□□□□ -0.64
FGFR1-238	ENST00000532791	KRTAP7-1	Q8IUC3	87 aa		11.05	□□□□□ -0.64
FGFR1-238	ENST00000532791		A8MUU9	505 aa		11.05	□□□□□ -0.64
FGFR1-238	ENST00000532791	KRTAP13-2	Q52LG2	175 aa		11.03	□□□□□ -0.64
FGFR1-238	ENST00000532791	NBEAL2	Q6ZNJ1	2754 aa		11.02	□□□□□ -0.64
FGFR1-238	ENST00000532791		A0A0C4DFX4	3053 aa		10.99	□□□□□ -0.65
FGFR1-238	ENST00000532791		A8MU10	97 aa		10.99	□□□□□ -0.65
FGFR1-238	ENST00000532791	BAHCC1	Q9P281	2608 aa		10.98	□□□□□ -0.65
FGFR1-238	ENST00000532791	RANBP2	P49792	3224 aa	Known RBP	10.96	□□□□□ -0.65
FGFR1-238	ENST00000532791	KRTAP13-1	Q8IUC0	172 aa		10.96	□□□□□ -0.66
FGFR1-238	ENST00000532791	UBR5	O95071	2799 aa	Predicted RBP	10.94	□□□□□ -0.66
FGFR1-238	ENST00000532791	IGSF10	Q6WRI0	2623 aa		10.94	□□□□□ -0.66
FGFR1-238	ENST00000532791	C20orf166-AS1	Q96NR2	134 aa		10.93	□□□□□ -0.66
FGFR1-238	ENST00000532791	HTT	P42858	3142 aa		10.92	□□□□□ -0.66
FGFR1-238	ENST00000532791	TRANK1	O15050	2925 aa		10.89	□□□□□ -0.67
FGFR1-238	ENST00000532791	KRTAP25-1	Q3LHN0	102 aa		10.88	□□□□□ -0.67
FGFR1-238	ENST00000532791	NSD1	Q96L73	2696 aa	Predicted RBP	10.87	□□□□□ -0.67
FGFR1-238	ENST00000532791	DSP	P15924	2871 aa	Known RBP	10.87	□□□□□ -0.67
FGFR1-238	ENST00000532791	WDFY4	Q6ZS81	3184 aa		10.84	□□□□□ -0.67
FGFR1-238	ENST00000532791		A6NN06	94 aa		10.82	□□□□□ -0.68
FGFR1-238	ENST00000532791	MAP1A	P78559	2803 aa	Predicted RBP	10.81	□□□□□ -0.68
FGFR1-238	ENST00000532791	ITPR2	Q14571	2701 aa		10.8	□□□□□ -0.68
FGFR1-238	ENST00000532791	LAMA3	Q16787	3333 aa		10.76	□□□□□ -0.69
FGFR1-238	ENST00000532791	FRY	Q5TBA9	3013 aa		10.75	□□□□□ -0.69
FGFR1-238	ENST00000532791	MKI67	P46013	3256 aa	Known RBP	10.72	□□□□□ -0.69
FGFR1-238	ENST00000532791	TNP1	P09430	55 aa		10.7	□□□□□ -0.7
FGFR1-238	ENST00000532791	KRTAP16-1	A8MUX0	517 aa		10.69	□□□□□ -0.7
FGFR1-238	ENST00000532791	KRTAP21-3	Q3LHN1	58 aa		10.68	□□□□□ -0.7
FGFR1-238	ENST00000532791	PRUNE2	Q8WUY3	3088 aa		10.68	□□□□□ -0.7
FGFR1-238	ENST00000532791	ITPR1	Q14643	2758 aa		10.66	□□□□□ -0.7
FGFR1-238	ENST00000532791	TRIO	O75962	3097 aa		10.64	□□□□□ -0.71
FGFR1-238	ENST00000532791	LAMA2	P24043	3122 aa	Known RBP	10.64	□□□□□ -0.71
FGFR1-238	ENST00000532791	BRCA2	P51587	3418 aa		10.63	□□□□□ -0.71
FGFR1-238	ENST00000532791	NDUFAF8	A1L188	74 aa		10.54	□□□□□ -0.72
FGFR1-238	ENST00000532791	KMT2B	Q9UMN6	2715 aa	Predicted RBP	10.52	□□□□□ -0.72
FGFR1-238	ENST00000532791	C10orf95	Q9H7T3	257 aa		10.51	□□□□□ -0.73
FGFR1-238	ENST00000532791	XP32	Q5T750	250 aa		10.48	□□□□□ -0.73
FGFR1-238	ENST00000532791	UTP20	O75691	2785 aa	Known RBP	10.47	□□□□□ -0.73
FGFR1-238	ENST00000532791	TACC2	O95359	2948 aa		10.45	□□□□□ -0.74
FGFR1-238	ENST00000532791	KRTAP1-4	P0C5Y4	121 aa		10.45	□□□□□ -0.74
FGFR1-238	ENST00000532791	XIRP2	A4UGR9	3374 aa		10.45	□□□□□ -0.74
FGFR1-238	ENST00000532791	VPS13A	Q96RL7	3174 aa		10.44	□□□□□ -0.74
FGFR1-238	ENST00000532791	APC	P25054	2843 aa		10.44	□□□□□ -0.74
FGFR1-238	ENST00000532791	UNC80	Q8N2C7	3258 aa		10.44	□□□□□ -0.74
FGFR1-238	ENST00000532791	KRTAP10-8	P60410	259 aa		10.41	□□□□□ -0.74
FGFR1-238	ENST00000532791		A0A1B0GVY2	172 aa		10.39	□□□□□ -0.75
FGFR1-238	ENST00000532791	HIVEP1	P15822	2718 aa		10.38	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms