RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 RPS28P62857 69 aaKnown RBP3.5□□□□□ -1.85
HMGB1P42-201ENST00000532126 LINC01545Q5VT33 79 aa3.5□□□□□ -1.85
HMGB1P42-201ENST00000532126 CEND1Q8N111 149 aa3.5□□□□□ -1.85
HMGB1P42-201ENST00000532126 MIR7-3HGQ8N6C7 128 aa3.5□□□□□ -1.85
HMGB1P42-201ENST00000532126 LINC01600Q96MT4 127 aa3.5□□□□□ -1.85
HMGB1P42-201ENST00000532126 TMEM126AQ9H061 195 aa3.5□□□□□ -1.85
HMGB1P42-201ENST00000532126 UQCR10Q9UDW1 63 aa3.5□□□□□ -1.85
HMGB1P42-201ENST00000532126 IGKV2-28A0A075B6P5 120 aa3.49□□□□□ -1.85
HMGB1P42-201ENST00000532126 A0A1B0GVX0 72 aa3.49□□□□□ -1.85
HMGB1P42-201ENST00000532126 A0A1B0GW54 56 aa3.49□□□□□ -1.85
HMGB1P42-201ENST00000532126 ZNF861PO60384 105 aa3.49□□□□□ -1.85
HMGB1P42-201ENST00000532126 IGKV2D-28P01615 120 aa3.49□□□□□ -1.85
HMGB1P42-201ENST00000532126 MT1HL1P0DM35 61 aa3.49□□□□□ -1.85
HMGB1P42-201ENST00000532126 RPL28P46779 137 aaKnown RBP3.49□□□□□ -1.85
HMGB1P42-201ENST00000532126 GTF2H5Q6ZYL4 71 aa3.49□□□□□ -1.85
HMGB1P42-201ENST00000532126 Q8NDZ9 215 aa3.49□□□□□ -1.85
HMGB1P42-201ENST00000532126 HERC1Q15751 4861 aa3.48□□□□□ -1.85
HMGB1P42-201ENST00000532126 HSD52Q0P140 79 aa3.48□□□□□ -1.85
HMGB1P42-201ENST00000532126 DAND5Q8N907 189 aa3.48□□□□□ -1.85
HMGB1P42-201ENST00000532126 VAMP8Q9BV40 100 aa3.48□□□□□ -1.85
HMGB1P42-201ENST00000532126 IMUPQ9GZP8 106 aa3.48□□□□□ -1.85
HMGB1P42-201ENST00000532126 PKHD1L1Q86WI1 4243 aa3.47□□□□□ -1.85
HMGB1P42-201ENST00000532126 K7ERS5 55 aa3.47□□□□□ -1.85
HMGB1P42-201ENST00000532126 M0R378 163 aa3.47□□□□□ -1.85
HMGB1P42-201ENST00000532126 NCR3O14931 201 aa3.47□□□□□ -1.85
HMGB1P42-201ENST00000532126 LYRM7Q5U5X0 104 aa3.47□□□□□ -1.85
HMGB1P42-201ENST00000532126 Q6Q795 121 aa3.47□□□□□ -1.85
HMGB1P42-201ENST00000532126 LRP1Q07954 4544 aaKnown RBP3.47□□□□□ -1.85
HMGB1P42-201ENST00000532126 IGKV2D-26A0A0A0MRZ7 120 aa3.46□□□□□ -1.86
HMGB1P42-201ENST00000532126 LOC107984156A0A0G2JMH3 177 aa3.46□□□□□ -1.86
HMGB1P42-201ENST00000532126 A0A1B0GX51 115 aa3.46□□□□□ -1.86
HMGB1P42-201ENST00000532126 ZNF815PA8K554 130 aa3.46□□□□□ -1.86
HMGB1P42-201ENST00000532126 J3KT08 172 aa3.46□□□□□ -1.86
HMGB1P42-201ENST00000532126 LST1O00453 97 aa3.46□□□□□ -1.86
HMGB1P42-201ENST00000532126 KRTAP10-8P60410 259 aa3.46□□□□□ -1.86
HMGB1P42-201ENST00000532126 LUZP6Q538Z0 58 aa3.46□□□□□ -1.86
HMGB1P42-201ENST00000532126 ARL17AQ8IVW1 177 aa3.46□□□□□ -1.86
HMGB1P42-201ENST00000532126 ATOH7Q8N100 152 aa3.46□□□□□ -1.86
HMGB1P42-201ENST00000532126 FAT3Q8TDW7 4589 aa3.45□□□□□ -1.86
HMGB1P42-201ENST00000532126 KRTAP1-4P0C5Y4 121 aa3.45□□□□□ -1.86
HMGB1P42-201ENST00000532126 NPC2P61916 151 aa3.45□□□□□ -1.86
HMGB1P42-201ENST00000532126 PRLHP81277 87 aa3.45□□□□□ -1.86
HMGB1P42-201ENST00000532126 KRTAP13-1Q8IUC0 172 aa3.45□□□□□ -1.86
HMGB1P42-201ENST00000532126 TYMSOSQ8TAI1 123 aa3.45□□□□□ -1.86
HMGB1P42-201ENST00000532126 TTTY13Q9BZ97 58 aa3.45□□□□□ -1.86
HMGB1P42-201ENST00000532126 TRBV10-3A0A0K0K1G6 114 aa3.44□□□□□ -1.86
HMGB1P42-201ENST00000532126 TRBV10-2A0A0K0K1G8 114 aa3.44□□□□□ -1.86
HMGB1P42-201ENST00000532126 A8MUN3 132 aa3.44□□□□□ -1.86
HMGB1P42-201ENST00000532126 TIMM17BO60830 172 aa3.44□□□□□ -1.86
HMGB1P42-201ENST00000532126 S100A7L2Q5SY68 101 aa3.44□□□□□ -1.86
HMGB1P42-201ENST00000532126 Q8N9P0 234 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P42-201ENST00000532126 KCNQ1DNQ9H478 68 aa3.44□□□□□ -1.86
HMGB1P42-201ENST00000532126 SOSTDC1Q6X4U4 206 aa3.43□□□□□ -1.86
HMGB1P42-201ENST00000532126 LINC00308Q8TCZ7 52 aa3.43□□□□□ -1.86
HMGB1P42-201ENST00000532126 HIGD2AQ9BW72 106 aa3.43□□□□□ -1.86
HMGB1P42-201ENST00000532126 ETDCA0A1B0GVM5 59 aa3.42□□□□□ -1.86
HMGB1P42-201ENST00000532126 TAX1BP3O14907 124 aa3.42□□□□□ -1.86
HMGB1P42-201ENST00000532126 IGLV6-57P01721 117 aa3.42□□□□□ -1.86
HMGB1P42-201ENST00000532126 CRYGAP11844 174 aa3.42□□□□□ -1.86
HMGB1P42-201ENST00000532126 SPRR1AP35321 89 aa3.42□□□□□ -1.86
HMGB1P42-201ENST00000532126 TRAV23DV6A0A075B6W5 121 aa3.41□□□□□ -1.86
HMGB1P42-201ENST00000532126 K7EP34 96 aa3.41□□□□□ -1.86
HMGB1P42-201ENST00000532126 FAM229BQ4G0N7 80 aa3.41□□□□□ -1.86
HMGB1P42-201ENST00000532126 COPS9Q8WXC6 57 aa3.41□□□□□ -1.86
HMGB1P42-201ENST00000532126 SPANXDQ9BXN6 97 aa3.41□□□□□ -1.86
HMGB1P42-201ENST00000532126 ANAPC11Q9NYG5 84 aa3.41□□□□□ -1.86
HMGB1P42-201ENST00000532126 HMCN2Q8NDA2 5059 aa3.4□□□□□ -1.86
HMGB1P42-201ENST00000532126 IFITM1P13164 125 aa3.4□□□□□ -1.87
HMGB1P42-201ENST00000532126 SPATA45Q537H7 98 aa3.4□□□□□ -1.87
HMGB1P42-201ENST00000532126 SMCR5Q8TEV8 140 aa3.4□□□□□ -1.87
HMGB1P42-201ENST00000532126 TNXBP22105 4242 aa3.4□□□□□ -1.87
HMGB1P42-201ENST00000532126 ZNF73O43830 326 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P42-201ENST00000532126 HINT1P49773 126 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P42-201ENST00000532126 SLC25A34Q6PIV7 304 aa3.39□□□□□ -1.87
HMGB1P42-201ENST00000532126 Q6ZRX8 168 aa3.39□□□□□ -1.87
HMGB1P42-201ENST00000532126 MUSTN1Q8IVN3 82 aa3.39□□□□□ -1.87
HMGB1P42-201ENST00000532126 SPRR4Q96PI1 79 aa3.39□□□□□ -1.87
HMGB1P42-201ENST00000532126 KRTAP13-2Q52LG2 175 aa3.38□□□□□ -1.87
HMGB1P42-201ENST00000532126 UBR4Q5T4S7 5183 aa3.38□□□□□ -1.87
HMGB1P42-201ENST00000532126 ERC2-IT1O76042 136 aa3.37□□□□□ -1.87
HMGB1P42-201ENST00000532126 BVES-AS1Q5T3Y7 98 aa3.37□□□□□ -1.87
HMGB1P42-201ENST00000532126 KTN1-AS1Q86SY8 53 aa3.37□□□□□ -1.87
HMGB1P42-201ENST00000532126 Q9BRP9 147 aa3.37□□□□□ -1.87
HMGB1P42-201ENST00000532126 TRAV13-2A0A0B4J235 113 aa3.36□□□□□ -1.87
HMGB1P42-201ENST00000532126 F8W1H4 67 aa3.36□□□□□ -1.87
HMGB1P42-201ENST00000532126 COX8AP10176 69 aa3.36□□□□□ -1.87
HMGB1P42-201ENST00000532126 COX7BP24311 80 aa3.36□□□□□ -1.87
HMGB1P42-201ENST00000532126 HIST1H4AP62805 103 aaKnown RBP3.36□□□□□ -1.87
HMGB1P42-201ENST00000532126 LCA10Q71F78 164 aa3.36□□□□□ -1.87
HMGB1P42-201ENST00000532126 C3orf22Q8N5N4 141 aa3.36□□□□□ -1.87
HMGB1P42-201ENST00000532126 LINC00304Q8N9R0 145 aa3.36□□□□□ -1.87
HMGB1P42-201ENST00000532126 C9JAW5 83 aa3.35□□□□□ -1.87
HMGB1P42-201ENST00000532126 LINC00483Q53H64 154 aa3.35□□□□□ -1.87
HMGB1P42-201ENST00000532126 TRBV7-6A0A0J9YX20 115 aa3.34□□□□□ -1.87
HMGB1P42-201ENST00000532126 ELOF1P60002 83 aaKnown RBP3.34□□□□□ -1.87
HMGB1P42-201ENST00000532126 PRR15Q8IV56 129 aa3.34□□□□□ -1.87
HMGB1P42-201ENST00000532126 ST20-AS1Q8NBB2 130 aa3.34□□□□□ -1.87
HMGB1P42-201ENST00000532126 A0A1W2PPM0 123 aa3.33□□□□□ -1.88
HMGB1P42-201ENST00000532126 SLC25A20O43772 301 aa3.33□□□□□ -1.88
HMGB1P42-201ENST00000532126 FABP2P12104 132 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms