RNA–Protein interactions for RNA: ENST00000531872.5

NXF1-212, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 390 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-212ENST00000531872 HERVK_113P61574 105 aa3.85□□□□□ -1.79
NXF1-212ENST00000531872 UQCC3Q6UW78 93 aa3.85□□□□□ -1.79
NXF1-212ENST00000531872 Q96NJ1 140 aa3.85□□□□□ -1.79
NXF1-212ENST00000531872 LITAFQ99732 161 aa3.85□□□□□ -1.79
NXF1-212ENST00000531872 FAM236DA0A1B0GTK5 79 aa3.84□□□□□ -1.79
NXF1-212ENST00000531872 A0A1B0GV90 55 aa3.84□□□□□ -1.79
NXF1-212ENST00000531872 KRTAP23-1A1A580 65 aa3.84□□□□□ -1.79
NXF1-212ENST00000531872 H0Y8G0 127 aa3.84□□□□□ -1.79
NXF1-212ENST00000531872 FAM236CP0DP71 79 aa3.84□□□□□ -1.79
NXF1-212ENST00000531872 MPLKIPQ8TAP9 179 aa3.84□□□□□ -1.79
NXF1-212ENST00000531872 TRBV7-7A0A0K0K1E9 115 aa3.83□□□□□ -1.8
NXF1-212ENST00000531872 A0A1B0GWB2 263 aa3.83□□□□□ -1.8
NXF1-212ENST00000531872 DPM2O94777 84 aa3.83□□□□□ -1.8
NXF1-212ENST00000531872 IGFL1Q6UW32 110 aa3.83□□□□□ -1.8
NXF1-212ENST00000531872 C14orf144Q96I85 54 aa3.83□□□□□ -1.8
NXF1-212ENST00000531872 KRTAP20-1Q3LI63 56 aa3.82□□□□□ -1.8
NXF1-212ENST00000531872 KRTAP4-12Q9BQ66 201 aa3.82□□□□□ -1.8
NXF1-212ENST00000531872 KRTAP16-1A8MUX0 517 aa3.81□□□□□ -1.8
NXF1-212ENST00000531872 E9PLD3 99 aa3.81□□□□□ -1.8
NXF1-212ENST00000531872 TIMM17BO60830 172 aa3.81□□□□□ -1.8
NXF1-212ENST00000531872 HSBP1O75506 76 aa3.81□□□□□ -1.8
NXF1-212ENST00000531872 IGKCP01834 107 aa3.81□□□□□ -1.8
NXF1-212ENST00000531872 HRES1P13985 223 aa3.81□□□□□ -1.8
NXF1-212ENST00000531872 F8WEM9 126 aa3.8□□□□□ -1.8
NXF1-212ENST00000531872 TRIAP1O43715 76 aa3.8□□□□□ -1.8
NXF1-212ENST00000531872 LEPROTL1O95214 131 aa3.8□□□□□ -1.8
NXF1-212ENST00000531872 Q6JHZ5 121 aa3.8□□□□□ -1.8
NXF1-212ENST00000531872 CLEC2BQ92478 149 aa3.8□□□□□ -1.8
NXF1-212ENST00000531872 PMCHL2Q9BQD1 86 aa3.8□□□□□ -1.8
NXF1-212ENST00000531872 RBM12B-AS1Q9P1G2 102 aa3.8□□□□□ -1.8
NXF1-212ENST00000531872 A4D1N5 150 aa3.79□□□□□ -1.8
NXF1-212ENST00000531872 LST1O00453 97 aa3.79□□□□□ -1.8
NXF1-212ENST00000531872 LCE3BQ5TA77 95 aa3.79□□□□□ -1.8
NXF1-212ENST00000531872 NHP2Q9NX24 153 aaKnown RBP3.79□□□□□ -1.8
NXF1-212ENST00000531872 DLEU1O43261 78 aa3.77□□□□□ -1.81
NXF1-212ENST00000531872 MDN1Q9NU22 5596 aa3.76□□□□□ -1.81
NXF1-212ENST00000531872 TRAV13-2A0A0B4J235 113 aa3.76□□□□□ -1.81
NXF1-212ENST00000531872 ZNF815PA8K554 130 aa3.76□□□□□ -1.81
NXF1-212ENST00000531872 TSTD3H0UI37 97 aa3.76□□□□□ -1.81
NXF1-212ENST00000531872 SERF1AO75920 110 aa3.76□□□□□ -1.81
NXF1-212ENST00000531872 OCIAD2Q56VL3 154 aa3.76□□□□□ -1.81
NXF1-212ENST00000531872 NOTCH2NLQ7Z3S9 236 aa3.76□□□□□ -1.81
NXF1-212ENST00000531872 SVBPQ8N300 66 aa3.76□□□□□ -1.81
NXF1-212ENST00000531872 HSPB8Q9UJY1 196 aa3.76□□□□□ -1.81
NXF1-212ENST00000531872 APOC3P02656 99 aa3.75□□□□□ -1.81
NXF1-212ENST00000531872 SNRPEP62304 92 aaKnown RBP3.75□□□□□ -1.81
NXF1-212ENST00000531872 YPEL4Q96NS1 127 aa3.75□□□□□ -1.81
NXF1-212ENST00000531872 A6NDN8 102 aa3.74□□□□□ -1.81
NXF1-212ENST00000531872 FABP4P15090 132 aa3.74□□□□□ -1.81
NXF1-212ENST00000531872 SMIM11BQ8TCY0 68 aa3.74□□□□□ -1.81
NXF1-212ENST00000531872 KRTAP3-1Q9BYR8 98 aa3.74□□□□□ -1.81
NXF1-212ENST00000531872 A8MWP4 228 aa3.73□□□□□ -1.81
NXF1-212ENST00000531872 DSCR10P59022 87 aa3.73□□□□□ -1.81
NXF1-212ENST00000531872 PYY3Q5JQD4 70 aa3.73□□□□□ -1.81
NXF1-212ENST00000531872 Q6ZQY7 126 aa3.73□□□□□ -1.81
NXF1-212ENST00000531872 Q8N9P0 234 aaPredicted RBP3.73□□□□□ -1.81
NXF1-212ENST00000531872 TTTY13Q9BZ97 58 aa3.73□□□□□ -1.81
NXF1-212ENST00000531872 COLCA2A8K830 154 aa3.72□□□□□ -1.81
NXF1-212ENST00000531872 LINC00575Q6W349 94 aa3.72□□□□□ -1.81
NXF1-212ENST00000531872 Q6ZVH6 145 aa3.72□□□□□ -1.81
NXF1-212ENST00000531872 SS18L2Q9UHA2 77 aa3.72□□□□□ -1.81
NXF1-212ENST00000531872 KMT2DO14686 5537 aa3.72□□□□□ -1.81
NXF1-212ENST00000531872 IFITM1P13164 125 aa3.71□□□□□ -1.82
NXF1-212ENST00000531872 MTURNQ8N3F0 131 aa3.71□□□□□ -1.82
NXF1-212ENST00000531872 COPS9Q8WXC6 57 aa3.71□□□□□ -1.82
NXF1-212ENST00000531872 hADV29S1A0JD25 119 aa3.7□□□□□ -1.82
NXF1-212ENST00000531872 M0R143 59 aa3.7□□□□□ -1.82
NXF1-212ENST00000531872 S100A2P29034 98 aa3.7□□□□□ -1.82
NXF1-212ENST00000531872 H3BUT2 72 aa3.69□□□□□ -1.82
NXF1-212ENST00000531872 SCGB1D1O95968 90 aa3.69□□□□□ -1.82
NXF1-212ENST00000531872 TRGC2P03986 189 aa3.69□□□□□ -1.82
NXF1-212ENST00000531872 SCGB1A1P11684 91 aa3.69□□□□□ -1.82
NXF1-212ENST00000531872 LINC00313P59037 77 aa3.69□□□□□ -1.82
NXF1-212ENST00000531872 VAMP3Q15836 100 aa3.69□□□□□ -1.82
NXF1-212ENST00000531872 MUSTN1Q8IVN3 82 aa3.69□□□□□ -1.82
NXF1-212ENST00000531872 PPDPFLQ8WWR9 84 aa3.69□□□□□ -1.82
NXF1-212ENST00000531872 SYS1-DBNDD2H3BUS1 97 aa3.68□□□□□ -1.82
NXF1-212ENST00000531872 KRTAP5-9P26371 169 aa3.68□□□□□ -1.82
NXF1-212ENST00000531872 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.68□□□□□ -1.82
NXF1-212ENST00000531872 SNHG12Q9BXW3 62 aa3.68□□□□□ -1.82
NXF1-212ENST00000531872 A0A087WSZ3 146 aa3.67□□□□□ -1.82
NXF1-212ENST00000531872 LINC01545Q5VT33 79 aa3.67□□□□□ -1.82
NXF1-212ENST00000531872 SCGB1D4Q6XE38 83 aa3.67□□□□□ -1.82
NXF1-212ENST00000531872 TEN1Q86WV5 123 aa3.67□□□□□ -1.82
NXF1-212ENST00000531872 KRTAP2-3P0C7H8 128 aa3.65□□□□□ -1.83
NXF1-212ENST00000531872 HIST3H2BBQ8N257 126 aa3.65□□□□□ -1.83
NXF1-212ENST00000531872 SIGMAR1Q99720 223 aa3.65□□□□□ -1.83
NXF1-212ENST00000531872 KRTAP2-4Q9BYR9 128 aa3.65□□□□□ -1.83
NXF1-212ENST00000531872 A6NN06 94 aa3.64□□□□□ -1.83
NXF1-212ENST00000531872 PET117Q6UWS5 81 aa3.64□□□□□ -1.83
NXF1-212ENST00000531872 A0A1B0GV72 72 aa3.63□□□□□ -1.83
NXF1-212ENST00000531872 COL5A1-AS1Q5SY13 56 aa3.63□□□□□ -1.83
NXF1-212ENST00000531872 SPINK7P58062 85 aa3.62□□□□□ -1.83
NXF1-212ENST00000531872 UBE2V1Q13404 147 aa3.62□□□□□ -1.83
NXF1-212ENST00000531872 COA6Q5JTJ3 125 aaKnown RBP3.62□□□□□ -1.83
NXF1-212ENST00000531872 LCE4AQ5TA78 99 aa3.62□□□□□ -1.83
NXF1-212ENST00000531872 K7ERU9 68 aa3.61□□□□□ -1.83
NXF1-212ENST00000531872 IGKV4-1P06312 121 aa3.61□□□□□ -1.83
NXF1-212ENST00000531872 VPS25Q9BRG1 176 aa3.61□□□□□ -1.83
NXF1-212ENST00000531872 BVES-AS1Q5T3Y7 98 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms