RNA–Protein interactions for RNA: ENST00000530275.3

MACF1-230, Transcript of microtubule-actin crosslinking factor 1, humanhuman

Gene MACF1, Length 5,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-230ENST00000530275 OXTP01178 125 aa7.61□□□□□ -1.19
MACF1-230ENST00000530275 SPATA8Q6RVD6 105 aa7.61□□□□□ -1.19
MACF1-230ENST00000530275 CHD8Q9HCK8 2581 aa7.6□□□□□ -1.19
MACF1-230ENST00000530275 ACANP16112 2415 aa7.58□□□□□ -1.2
MACF1-230ENST00000530275 FASNP49327 2511 aaKnown RBP7.56□□□□□ -1.2
MACF1-230ENST00000530275 ASB16-AS1Q495Z4 193 aa7.56□□□□□ -1.2
MACF1-230ENST00000530275 KRTAP4-16G5E9R7 235 aaPredicted RBP7.55□□□□□ -1.2
MACF1-230ENST00000530275 PANO1I0J062 215 aa7.54□□□□□ -1.2
MACF1-230ENST00000530275 KRTAP29-1A8MX34 341 aaPredicted RBP7.54□□□□□ -1.2
MACF1-230ENST00000530275 SPTBN4Q9H254 2564 aa7.52□□□□□ -1.2
MACF1-230ENST00000530275 A0A087X002 238 aa7.5□□□□□ -1.21
MACF1-230ENST00000530275 CENPFP49454 3210 aa7.47□□□□□ -1.21
MACF1-230ENST00000530275 RPS29P62273 56 aaKnown RBP7.44□□□□□ -1.22
MACF1-230ENST00000530275 NOTCH2NLQ7Z3S9 236 aa7.43□□□□□ -1.22
MACF1-230ENST00000530275 A8MUU9 505 aa7.39□□□□□ -1.23
MACF1-230ENST00000530275 KRTAP25-1Q3LHN0 102 aa7.38□□□□□ -1.23
MACF1-230ENST00000530275 C20orf166-AS1Q96NR2 134 aa7.37□□□□□ -1.23
MACF1-230ENST00000530275 A8MU10 97 aa7.36□□□□□ -1.23
MACF1-230ENST00000530275 KRTAP11-1Q8IUC1 163 aa7.35□□□□□ -1.23
MACF1-230ENST00000530275 KRTAP16-1A8MUX0 517 aa7.33□□□□□ -1.24
MACF1-230ENST00000530275 A6NN06 94 aa7.31□□□□□ -1.24
MACF1-230ENST00000530275 Q6ZRN7 208 aaPredicted RBP7.3□□□□□ -1.24
MACF1-230ENST00000530275 KRTAP13-2Q52LG2 175 aa7.26□□□□□ -1.25
MACF1-230ENST00000530275 HECTD1Q9ULT8 2610 aa7.26□□□□□ -1.25
MACF1-230ENST00000530275 KRTAP7-1Q8IUC3 87 aa7.25□□□□□ -1.25
MACF1-230ENST00000530275 KRTAP13-1Q8IUC0 172 aa7.22□□□□□ -1.25
MACF1-230ENST00000530275 FLNAP21333 2647 aaKnown RBP7.2□□□□□ -1.26
MACF1-230ENST00000530275 MGAM2Q2M2H8 2515 aa7.2□□□□□ -1.26
MACF1-230ENST00000530275 TNP1P09430 55 aa7.19□□□□□ -1.26
MACF1-230ENST00000530275 EPG5Q9HCE0 2579 aa7.14□□□□□ -1.27
MACF1-230ENST00000530275 NDUFAF8A1L188 74 aa7.14□□□□□ -1.27
MACF1-230ENST00000530275 ITPR3Q14573 2671 aa7.13□□□□□ -1.27
MACF1-230ENST00000530275 USP24Q9UPU5 2620 aa7.13□□□□□ -1.27
MACF1-230ENST00000530275 C10orf95Q9H7T3 257 aa7.12□□□□□ -1.27
MACF1-230ENST00000530275 GOLGB1Q14789 3259 aaKnown RBP7.11□□□□□ -1.27
MACF1-230ENST00000530275 BPTFQ12830 3046 aa7.09□□□□□ -1.27
MACF1-230ENST00000530275 ATRQ13535 2644 aa7.03□□□□□ -1.28
MACF1-230ENST00000530275 PP632Q6XCG6 107 aa6.98□□□□□ -1.29
MACF1-230ENST00000530275 FLNBO75369 2602 aaKnown RBP6.97□□□□□ -1.29
MACF1-230ENST00000530275 MAST4O15021 2626 aa6.96□□□□□ -1.3
MACF1-230ENST00000530275 DNAH12Q6ZR08 3092 aa6.96□□□□□ -1.3
MACF1-230ENST00000530275 HELZ2Q9BYK8 2649 aaKnown RBP6.95□□□□□ -1.3
MACF1-230ENST00000530275 KRTAP10-8P60410 259 aa6.94□□□□□ -1.3
MACF1-230ENST00000530275 UTRNP46939 3433 aa6.94□□□□□ -1.3
MACF1-230ENST00000530275 XP32Q5T750 250 aa6.93□□□□□ -1.3
MACF1-230ENST00000530275 KRTAP21-3Q3LHN1 58 aa6.91□□□□□ -1.3
MACF1-230ENST00000530275 A0A1B0GVY2 172 aa6.91□□□□□ -1.3
MACF1-230ENST00000530275 PRRC2CQ9Y520 2896 aaKnown RBP6.86□□□□□ -1.31
MACF1-230ENST00000530275 KRTAP1-4P0C5Y4 121 aa6.85□□□□□ -1.31
MACF1-230ENST00000530275 DMBT1Q9UGM3 2413 aaPredicted RBP6.84□□□□□ -1.31
MACF1-230ENST00000530275 CFAP46Q8IYW2 2715 aa6.82□□□□□ -1.32
MACF1-230ENST00000530275 NBEAL1Q6ZS30 2694 aa6.81□□□□□ -1.32
MACF1-230ENST00000530275 H0YAA0 97 aa6.8□□□□□ -1.32
MACF1-230ENST00000530275 C5orf42Q9H799 3197 aa6.8□□□□□ -1.32
MACF1-230ENST00000530275 FLG2Q5D862 2391 aaPredicted RBP6.78□□□□□ -1.32
MACF1-230ENST00000530275 TPRXLQ17RH7 258 aa6.78□□□□□ -1.32
MACF1-230ENST00000530275 P0C880 135 aa6.76□□□□□ -1.33
MACF1-230ENST00000530275 CHD7Q9P2D1 2997 aa6.75□□□□□ -1.33
MACF1-230ENST00000530275 PRO2289Q9P1D8 64 aa6.75□□□□□ -1.33
MACF1-230ENST00000530275 KRTAP10-10P60014 251 aa6.75□□□□□ -1.33
MACF1-230ENST00000530275 STAB1Q9NY15 2570 aa6.74□□□□□ -1.33
MACF1-230ENST00000530275 CHD6Q8TD26 2715 aa6.68□□□□□ -1.34
MACF1-230ENST00000530275 GCN1Q92616 2671 aaKnown RBP6.67□□□□□ -1.34
MACF1-230ENST00000530275 TEX15Q9BXT5 2789 aa6.67□□□□□ -1.34
MACF1-230ENST00000530275 CEP350Q5VT06 3117 aa6.67□□□□□ -1.34
MACF1-230ENST00000530275 CENPEQ02224 2701 aa6.66□□□□□ -1.34
MACF1-230ENST00000530275 CHD9Q3L8U1 2897 aa6.65□□□□□ -1.35
MACF1-230ENST00000530275 KRTAP13-3Q3SY46 172 aa6.64□□□□□ -1.35
MACF1-230ENST00000530275 PCNTO95613 3336 aa6.63□□□□□ -1.35
MACF1-230ENST00000530275 UNC79Q9P2D8 2635 aa6.63□□□□□ -1.35
MACF1-230ENST00000530275 TEP1Q99973 2627 aaKnown RBP6.59□□□□□ -1.35
MACF1-230ENST00000530275 AKAP13Q12802 2813 aa6.56□□□□□ -1.36
MACF1-230ENST00000530275 HTTP42858 3142 aa6.55□□□□□ -1.36
MACF1-230ENST00000530275 MGAQ8IWI9 3026 aa6.54□□□□□ -1.36
MACF1-230ENST00000530275 NBEAL2Q6ZNJ1 2754 aa6.52□□□□□ -1.37
MACF1-230ENST00000530275 COL6A5A8TX70 2615 aa6.51□□□□□ -1.37
MACF1-230ENST00000530275 SETXQ7Z333 2677 aaKnown RBP6.5□□□□□ -1.37
MACF1-230ENST00000530275 KMT2BQ9UMN6 2715 aaPredicted RBP6.49□□□□□ -1.37
MACF1-230ENST00000530275 A0A0C4DFX4 3053 aa6.47□□□□□ -1.37
MACF1-230ENST00000530275 CFAP54Q96N23 3096 aa6.47□□□□□ -1.37
MACF1-230ENST00000530275 STAB2Q8WWQ8 2551 aa6.46□□□□□ -1.38
MACF1-230ENST00000530275 TRANK1O15050 2925 aa6.44□□□□□ -1.38
MACF1-230ENST00000530275 BRCA2P51587 3418 aa6.44□□□□□ -1.38
MACF1-230ENST00000530275 KRTAP12-2P59991 146 aa6.44□□□□□ -1.38
MACF1-230ENST00000530275 ZNF292O60281 2723 aa6.44□□□□□ -1.38
MACF1-230ENST00000530275 ITPR2Q14571 2701 aa6.43□□□□□ -1.38
MACF1-230ENST00000530275 LAMA2P24043 3122 aaKnown RBP6.43□□□□□ -1.38
MACF1-230ENST00000530275 IGSF10Q6WRI0 2623 aa6.42□□□□□ -1.38
MACF1-230ENST00000530275 NSD1Q96L73 2696 aaPredicted RBP6.42□□□□□ -1.38
MACF1-230ENST00000530275 NOTCH1P46531 2555 aa6.41□□□□□ -1.38
MACF1-230ENST00000530275 BAHCC1Q9P281 2608 aa6.4□□□□□ -1.38
MACF1-230ENST00000530275 MKI67P46013 3256 aaKnown RBP6.38□□□□□ -1.39
MACF1-230ENST00000530275 KRTAP13-4Q3LI77 160 aa6.37□□□□□ -1.39
MACF1-230ENST00000530275 RANBP2P49792 3224 aaKnown RBP6.33□□□□□ -1.4
MACF1-230ENST00000530275 UNC80Q8N2C7 3258 aa6.32□□□□□ -1.4
MACF1-230ENST00000530275 TRIOO75962 3097 aa6.31□□□□□ -1.4
MACF1-230ENST00000530275 MAP1AP78559 2803 aaPredicted RBP6.3□□□□□ -1.4
MACF1-230ENST00000530275 UBR5O95071 2799 aaPredicted RBP6.27□□□□□ -1.41
MACF1-230ENST00000530275 KRTAP12-1P59990 96 aa6.27□□□□□ -1.41
MACF1-230ENST00000530275 FRYQ5TBA9 3013 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms