RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 ABCA4P78363 2273 aa1.85□□□□□ -2.11
COPB1-205ENST00000526527 COL12A1Q99715 3063 aa1.85□□□□□ -2.11
COPB1-205ENST00000526527 CACNA1DQ01668 2161 aa1.85□□□□□ -2.11
COPB1-205ENST00000526527 TEP1Q99973 2627 aaKnown RBP1.85□□□□□ -2.11
COPB1-205ENST00000526527 FBN2P35556 2912 aa1.84□□□□□ -2.11
COPB1-205ENST00000526527 MTORP42345 2549 aa1.84□□□□□ -2.11
COPB1-205ENST00000526527 CREBBPQ92793 2442 aa1.84□□□□□ -2.11
COPB1-205ENST00000526527 DEFB108AA8MXU0 73 aa1.84□□□□□ -2.11
COPB1-205ENST00000526527 IAPPP10997 89 aa1.84□□□□□ -2.11
COPB1-205ENST00000526527 RPS27P42677 84 aaKnown RBP1.84□□□□□ -2.11
COPB1-205ENST00000526527 HCP5Q6MZN7 132 aa1.84□□□□□ -2.11
COPB1-205ENST00000526527 ZCCHC13Q8WW36 166 aaKnown RBP1.84□□□□□ -2.11
COPB1-205ENST00000526527 SPRR4Q96PI1 79 aa1.84□□□□□ -2.11
COPB1-205ENST00000526527 ARHGAP32A7KAX9 2087 aa1.84□□□□□ -2.12
COPB1-205ENST00000526527 F8P00451 2351 aa1.84□□□□□ -2.12
COPB1-205ENST00000526527 FREM1Q5H8C1 2179 aa1.83□□□□□ -2.12
COPB1-205ENST00000526527 CADP27708 2225 aa1.83□□□□□ -2.12
COPB1-205ENST00000526527 USF3Q68DE3 2245 aa1.83□□□□□ -2.12
COPB1-205ENST00000526527 HRNRQ86YZ3 2850 aaPredicted RBP1.83□□□□□ -2.12
COPB1-205ENST00000526527 TRGV1A0A0A0MS02 117 aa1.83□□□□□ -2.12
COPB1-205ENST00000526527 IGKV3OR2-268A0A0C4DH90 116 aa1.83□□□□□ -2.12
COPB1-205ENST00000526527 A0A1B0GU69 56 aa1.83□□□□□ -2.12
COPB1-205ENST00000526527 H3BSH0 61 aa1.83□□□□□ -2.12
COPB1-205ENST00000526527 NCR3O14931 201 aa1.83□□□□□ -2.12
COPB1-205ENST00000526527 SPINK7P58062 85 aa1.83□□□□□ -2.12
COPB1-205ENST00000526527 RPL37AP61513 92 aaKnown RBP1.83□□□□□ -2.12
COPB1-205ENST00000526527 COA5Q86WW8 74 aa1.83□□□□□ -2.12
COPB1-205ENST00000526527 SMIM2Q9BVW6 85 aa1.83□□□□□ -2.12
COPB1-205ENST00000526527 RTTNQ86VV8 2226 aa1.83□□□□□ -2.12
COPB1-205ENST00000526527 ITPR2Q14571 2701 aa1.82□□□□□ -2.12
COPB1-205ENST00000526527 ACANP16112 2415 aa1.82□□□□□ -2.12
COPB1-205ENST00000526527 TEX15Q9BXT5 2789 aa1.82□□□□□ -2.12
COPB1-205ENST00000526527 MALRD1Q5VYJ5 2156 aa1.82□□□□□ -2.12
COPB1-205ENST00000526527 ALPK2Q86TB3 2170 aa1.82□□□□□ -2.12
COPB1-205ENST00000526527 ANKRD17O75179 2603 aaKnown RBP1.82□□□□□ -2.12
COPB1-205ENST00000526527 PLCE1Q9P212 2302 aa1.82□□□□□ -2.12
COPB1-205ENST00000526527 LYNX1G3V0Z9 82 aa1.82□□□□□ -2.12
COPB1-205ENST00000526527 IGLV3-1P01715 115 aa1.82□□□□□ -2.12
COPB1-205ENST00000526527 LYNX1P0DP58 116 aa1.82□□□□□ -2.12
COPB1-205ENST00000526527 ACYP2P14621 99 aa1.82□□□□□ -2.12
COPB1-205ENST00000526527 COX7BP24311 80 aa1.82□□□□□ -2.12
COPB1-205ENST00000526527 ZNF625Q96I27 306 aaPredicted RBP1.82□□□□□ -2.12
COPB1-205ENST00000526527 ARHGAP5-AS1Q96IT6 56 aa1.82□□□□□ -2.12
COPB1-205ENST00000526527 CCL19Q99731 98 aa1.82□□□□□ -2.12
COPB1-205ENST00000526527 SMR3AQ99954 134 aa1.82□□□□□ -2.12
COPB1-205ENST00000526527 PRO2289Q9P1D8 64 aa1.82□□□□□ -2.12
COPB1-205ENST00000526527 R4GN34 69 aa1.82□□□□□ -2.12
COPB1-205ENST00000526527 NAV3Q8IVL0 2385 aa1.82□□□□□ -2.12
COPB1-205ENST00000526527 TLN2Q9Y4G6 2542 aa1.82□□□□□ -2.12
COPB1-205ENST00000526527 FLNAP21333 2647 aaKnown RBP1.82□□□□□ -2.12
COPB1-205ENST00000526527 ITPR3Q14573 2671 aa1.81□□□□□ -2.12
COPB1-205ENST00000526527 A0A1W2PNN7 141 aa1.81□□□□□ -2.12
COPB1-205ENST00000526527 Q6ZQY7 126 aa1.81□□□□□ -2.12
COPB1-205ENST00000526527 KCNQ1DNQ9H478 68 aa1.81□□□□□ -2.12
COPB1-205ENST00000526527 CSPG4Q6UVK1 2322 aa1.81□□□□□ -2.12
COPB1-205ENST00000526527 SONP18583 2426 aaKnown RBP1.81□□□□□ -2.12
COPB1-205ENST00000526527 CR1P17927 2039 aa1.81□□□□□ -2.12
COPB1-205ENST00000526527 APCP25054 2843 aa1.81□□□□□ -2.12
COPB1-205ENST00000526527 LRBAP50851 2863 aa1.8□□□□□ -2.12
COPB1-205ENST00000526527 CSMD1Q96PZ7 3565 aa1.8□□□□□ -2.12
COPB1-205ENST00000526527 ABCA2Q9BZC7 2435 aa1.8□□□□□ -2.12
COPB1-205ENST00000526527 LINC01590Q5TEZ4 76 aa1.8□□□□□ -2.12
COPB1-205ENST00000526527 FN1P02751 2386 aaKnown RBP1.8□□□□□ -2.12
COPB1-205ENST00000526527 NBPF19A0A087WUL8 3843 aa1.8□□□□□ -2.12
COPB1-205ENST00000526527 PDZD2O15018 2839 aa1.8□□□□□ -2.12
COPB1-205ENST00000526527 ADGRG4Q8IZF6 3080 aa1.8□□□□□ -2.12
COPB1-205ENST00000526527 HIVEP1P15822 2718 aa1.79□□□□□ -2.12
COPB1-205ENST00000526527 OTOGQ6ZRI0 2925 aa1.79□□□□□ -2.12
COPB1-205ENST00000526527 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.79□□□□□ -2.12
COPB1-205ENST00000526527 IGKV2-29A2NJV5 120 aaPredicted RBP1.79□□□□□ -2.12
COPB1-205ENST00000526527 IGKV4-1P06312 121 aa1.79□□□□□ -2.12
COPB1-205ENST00000526527 LINC00315P59091 139 aa1.79□□□□□ -2.12
COPB1-205ENST00000526527 PRB3Q04118 309 aaPredicted RBP1.79□□□□□ -2.12
COPB1-205ENST00000526527 KRTAP21-2Q3LI59 83 aa1.79□□□□□ -2.12
COPB1-205ENST00000526527 LINC00308Q8TCZ7 52 aa1.79□□□□□ -2.12
COPB1-205ENST00000526527 MED13LQ71F56 2210 aa1.79□□□□□ -2.12
COPB1-205ENST00000526527 C2CD3Q4AC94 2353 aa1.79□□□□□ -2.12
COPB1-205ENST00000526527 JMJD1CQ15652 2540 aa1.79□□□□□ -2.12
COPB1-205ENST00000526527 CELSR2Q9HCU4 2923 aa1.79□□□□□ -2.12
COPB1-205ENST00000526527 ANK3Q12955 4377 aaKnown RBP1.79□□□□□ -2.12
COPB1-205ENST00000526527 DCHS2Q6V1P9 2916 aa1.78□□□□□ -2.12
COPB1-205ENST00000526527 ARFGEF3Q5TH69 2177 aa1.78□□□□□ -2.12
COPB1-205ENST00000526527 NDUFA1O15239 70 aa1.78□□□□□ -2.12
COPB1-205ENST00000526527 C5orf56Q8N8D9 126 aa1.78□□□□□ -2.12
COPB1-205ENST00000526527 DEFB108BQ8NET1 73 aa1.78□□□□□ -2.12
COPB1-205ENST00000526527 CNFNQ9BYD5 112 aa1.78□□□□□ -2.12
COPB1-205ENST00000526527 TACC2O95359 2948 aa1.78□□□□□ -2.12
COPB1-205ENST00000526527 CSMD2Q7Z408 3487 aa1.78□□□□□ -2.13
COPB1-205ENST00000526527 CRYBG3Q68DQ2 2970 aa1.77□□□□□ -2.13
COPB1-205ENST00000526527 SETD2Q9BYW2 2564 aaPredicted RBP1.77□□□□□ -2.13
COPB1-205ENST00000526527 HIVEP2P31629 2446 aa1.77□□□□□ -2.13
COPB1-205ENST00000526527 DEFB131BA0A096LNP1 70 aa1.77□□□□□ -2.13
COPB1-205ENST00000526527 A0A096LNT2 108 aa1.77□□□□□ -2.13
COPB1-205ENST00000526527 LINC00158P58513 81 aa1.77□□□□□ -2.13
COPB1-205ENST00000526527 C10orf55Q5SWW7 151 aa1.77□□□□□ -2.13
COPB1-205ENST00000526527 NSD1Q96L73 2696 aaPredicted RBP1.77□□□□□ -2.13
COPB1-205ENST00000526527 ZANQ9Y493 2812 aa1.76□□□□□ -2.13
COPB1-205ENST00000526527 A0A0G2JQZ4 141 aa1.76□□□□□ -2.13
COPB1-205ENST00000526527 NBDYA0A0U1RRE5 68 aa1.76□□□□□ -2.13
COPB1-205ENST00000526527 LINC00959A0A1B0GUT2 108 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms