RNA–Protein interactions for RNA: ENST00000526457.3

LRRK1-205, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 11,632 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-205ENST00000526457 RTL8CO15255 209 aa5.06□□□□□ -1.6
LRRK1-205ENST00000526457 KRTAP10-9P60411 292 aa5.06□□□□□ -1.6
LRRK1-205ENST00000526457 IGLV1-50A0A075B6I6 118 aa5.06□□□□□ -1.6
LRRK1-205ENST00000526457 ZNF575Q86XF7 245 aa5.06□□□□□ -1.6
LRRK1-205ENST00000526457 SPINK7P58062 85 aa5.05□□□□□ -1.6
LRRK1-205ENST00000526457 LINC01558Q9Y6Z2 57 aa5.05□□□□□ -1.6
LRRK1-205ENST00000526457 C15orf56Q8N910 161 aa5.04□□□□□ -1.6
LRRK1-205ENST00000526457 CYSTM1Q9H1C7 97 aa5.04□□□□□ -1.6
LRRK1-205ENST00000526457 C9orf92A6NGG3 77 aa5.04□□□□□ -1.6
LRRK1-205ENST00000526457 TACC2O95359 2948 aa5.04□□□□□ -1.6
LRRK1-205ENST00000526457 CELSR2Q9HCU4 2923 aa5.04□□□□□ -1.6
LRRK1-205ENST00000526457 COX6B2Q6YFQ2 88 aa5.04□□□□□ -1.6
LRRK1-205ENST00000526457 IGLV5-37A0A075B6J1 123 aa5.02□□□□□ -1.61
LRRK1-205ENST00000526457 A0A1W2PNM2 257 aa5.02□□□□□ -1.61
LRRK1-205ENST00000526457 TENM3Q9P273 2699 aa5.02□□□□□ -1.61
LRRK1-205ENST00000526457 DNAH10OSP0CZ25 163 aa5.02□□□□□ -1.61
LRRK1-205ENST00000526457 NF1P21359 2839 aa5.01□□□□□ -1.61
LRRK1-205ENST00000526457 LINC00304Q8N9R0 145 aa5.01□□□□□ -1.61
LRRK1-205ENST00000526457 TENM1Q9UKZ4 2725 aa5□□□□□ -1.61
LRRK1-205ENST00000526457 Q8NAQ8 132 aa5□□□□□ -1.61
LRRK1-205ENST00000526457 KALRNO60229 2985 aa5□□□□□ -1.61
LRRK1-205ENST00000526457 NBEAQ8NFP9 2946 aa5□□□□□ -1.61
LRRK1-205ENST00000526457 ASB16-AS1Q495Z4 193 aa4.98□□□□□ -1.61
LRRK1-205ENST00000526457 HRES1P13985 223 aa4.98□□□□□ -1.61
LRRK1-205ENST00000526457 A0A1W2PPR1 153 aa4.98□□□□□ -1.61
LRRK1-205ENST00000526457 NBDYA0A0U1RRE5 68 aa4.97□□□□□ -1.61
LRRK1-205ENST00000526457 LRBAP50851 2863 aa4.97□□□□□ -1.61
LRRK1-205ENST00000526457 OXTP01178 125 aa4.97□□□□□ -1.61
LRRK1-205ENST00000526457 PRR34Q9NV39 138 aa4.97□□□□□ -1.61
LRRK1-205ENST00000526457 ZNF861PO60384 105 aa4.96□□□□□ -1.61
LRRK1-205ENST00000526457 ANAPC11Q9NYG5 84 aa4.94□□□□□ -1.62
LRRK1-205ENST00000526457 ROMO1P60602 79 aa4.94□□□□□ -1.62
LRRK1-205ENST00000526457 SPRR4Q96PI1 79 aa4.92□□□□□ -1.62
LRRK1-205ENST00000526457 NIPBLQ6KC79 2804 aaeCLIP4.92□□□□□ -1.62
LRRK1-205ENST00000526457 CNBPP62633 177 aaKnown RBP4.91□□□□□ -1.62
LRRK1-205ENST00000526457 C19orf73Q9NVV2 129 aa4.9□□□□□ -1.62
LRRK1-205ENST00000526457 J3QL48 77 aa4.9□□□□□ -1.63
LRRK1-205ENST00000526457 LINC00612Q8N6U2 182 aa4.9□□□□□ -1.63
LRRK1-205ENST00000526457 RANBP2P49792 3224 aaKnown RBP4.89□□□□□ -1.63
LRRK1-205ENST00000526457 PRUNE2Q8WUY3 3088 aa4.88□□□□□ -1.63
LRRK1-205ENST00000526457 LAMA1P25391 3075 aa4.88□□□□□ -1.63
LRRK1-205ENST00000526457 MKI67P46013 3256 aaKnown RBP4.87□□□□□ -1.63
LRRK1-205ENST00000526457 WDFY4Q6ZS81 3184 aa4.87□□□□□ -1.63
LRRK1-205ENST00000526457 NDUFAF8A1L188 74 aa4.86□□□□□ -1.63
LRRK1-205ENST00000526457 ZZEF1O43149 2961 aa4.85□□□□□ -1.63
LRRK1-205ENST00000526457 ASH1LQ9NR48 2969 aaKnown RBP4.85□□□□□ -1.63
LRRK1-205ENST00000526457 RPL37P61927 97 aaKnown RBP4.85□□□□□ -1.63
LRRK1-205ENST00000526457 PSORS1C2Q9UIG4 136 aa4.85□□□□□ -1.63
LRRK1-205ENST00000526457 MMP24-AS1A0A0U1RRL7 71 aa4.84□□□□□ -1.63
LRRK1-205ENST00000526457 GIG44P09565 113 aaPredicted RBP4.84□□□□□ -1.63
LRRK1-205ENST00000526457 S4R3F8 94 aa4.84□□□□□ -1.64
LRRK1-205ENST00000526457 A0A096LNT2 108 aa4.83□□□□□ -1.64
LRRK1-205ENST00000526457 ZANQ9Y493 2812 aa4.83□□□□□ -1.64
LRRK1-205ENST00000526457 H1FX-AS1Q4G0G2 97 aa4.83□□□□□ -1.64
LRRK1-205ENST00000526457 Q5W150 140 aa4.82□□□□□ -1.64
LRRK1-205ENST00000526457 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.82□□□□□ -1.64
LRRK1-205ENST00000526457 A6NN06 94 aa4.82□□□□□ -1.64
LRRK1-205ENST00000526457 HTTP42858 3142 aa4.81□□□□□ -1.64
LRRK1-205ENST00000526457 TNRC18O15417 2968 aaPredicted RBP4.81□□□□□ -1.64
LRRK1-205ENST00000526457 XIRP2A4UGR9 3374 aa4.8□□□□□ -1.64
LRRK1-205ENST00000526457 ZCCHC13Q8WW36 166 aaKnown RBP4.8□□□□□ -1.64
LRRK1-205ENST00000526457 KRTAP25-1Q3LHN0 102 aa4.79□□□□□ -1.64
LRRK1-205ENST00000526457 A0A087WTM6 91 aa4.77□□□□□ -1.65
LRRK1-205ENST00000526457 R4GN34 69 aa4.76□□□□□ -1.65
LRRK1-205ENST00000526457 COL12A1Q99715 3063 aa4.76□□□□□ -1.65
LRRK1-205ENST00000526457 CASC10Q5T4H9 136 aa4.76□□□□□ -1.65
LRRK1-205ENST00000526457 TENM4Q6N022 2769 aa4.76□□□□□ -1.65
LRRK1-205ENST00000526457 PLAC4Q8WY50 150 aa4.76□□□□□ -1.65
LRRK1-205ENST00000526457 TNP2Q05952 138 aa4.76□□□□□ -1.65
LRRK1-205ENST00000526457 Q6ZSA8 131 aa4.76□□□□□ -1.65
LRRK1-205ENST00000526457 PDZD2O15018 2839 aa4.76□□□□□ -1.65
LRRK1-205ENST00000526457 LAMA3Q16787 3333 aa4.75□□□□□ -1.65
LRRK1-205ENST00000526457 REV3LO60673 3130 aa4.75□□□□□ -1.65
LRRK1-205ENST00000526457 FREM2Q5SZK8 3169 aa4.75□□□□□ -1.65
LRRK1-205ENST00000526457 SPATA8Q6RVD6 105 aa4.75□□□□□ -1.65
LRRK1-205ENST00000526457 BOD1L1Q8NFC6 3051 aa4.75□□□□□ -1.65
LRRK1-205ENST00000526457 DMXL2Q8TDJ6 3036 aa4.75□□□□□ -1.65
LRRK1-205ENST00000526457 USP34Q70CQ2 3546 aa4.75□□□□□ -1.65
LRRK1-205ENST00000526457 SRRM2Q9UQ35 2752 aaKnown RBP4.74□□□□□ -1.65
LRRK1-205ENST00000526457 DMXL1Q9Y485 3027 aa4.74□□□□□ -1.65
LRRK1-205ENST00000526457 CRYBG3Q68DQ2 2970 aa4.74□□□□□ -1.65
LRRK1-205ENST00000526457 SMR3BP02814 79 aaPredicted RBP4.73□□□□□ -1.65
LRRK1-205ENST00000526457 KRTAP24-1Q3LI83 254 aa4.73□□□□□ -1.65
LRRK1-205ENST00000526457 CELSR3Q9NYQ7 3312 aa4.73□□□□□ -1.65
LRRK1-205ENST00000526457 VWFP04275 2813 aa4.72□□□□□ -1.65
LRRK1-205ENST00000526457 LINC00472Q9H8W2 130 aa4.72□□□□□ -1.65
LRRK1-205ENST00000526457 ADGRG4Q8IZF6 3080 aa4.72□□□□□ -1.65
LRRK1-205ENST00000526457 ADM2Q7Z4H4 148 aa4.72□□□□□ -1.65
LRRK1-205ENST00000526457 PKD1L1Q8TDX9 2849 aa4.71□□□□□ -1.65
LRRK1-205ENST00000526457 Q8NDZ9 215 aa4.7□□□□□ -1.66
LRRK1-205ENST00000526457 DNAH14Q0VDD8 3507 aa4.69□□□□□ -1.66
LRRK1-205ENST00000526457 KRTAP10-11P60412 298 aa4.69□□□□□ -1.66
LRRK1-205ENST00000526457 M0QZ58 72 aa4.69□□□□□ -1.66
LRRK1-205ENST00000526457 SPRR1AP35321 89 aa4.69□□□□□ -1.66
LRRK1-205ENST00000526457 C20orf166-AS1Q96NR2 134 aa4.68□□□□□ -1.66
LRRK1-205ENST00000526457 Q6ZR54 194 aa4.67□□□□□ -1.66
LRRK1-205ENST00000526457 DCHS2Q6V1P9 2916 aa4.67□□□□□ -1.66
LRRK1-205ENST00000526457 BRCA2P51587 3418 aa4.67□□□□□ -1.66
LRRK1-205ENST00000526457 UNC80Q8N2C7 3258 aa4.67□□□□□ -1.66
LRRK1-205ENST00000526457 FBN2P35556 2912 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms