RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 Q8N377 158 aa6.29□□□□□ -1.4
NEDD8-204ENST00000526430 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.28□□□□□ -1.4
NEDD8-204ENST00000526430 VAMP3Q15836 100 aa6.28□□□□□ -1.4
NEDD8-204ENST00000526430 ZNF706Q9Y5V0 76 aaPredicted RBP6.28□□□□□ -1.4
NEDD8-204ENST00000526430 hADV29S1A0JD25 119 aa6.27□□□□□ -1.41
NEDD8-204ENST00000526430 M0R143 59 aa6.27□□□□□ -1.41
NEDD8-204ENST00000526430 LCE2CQ5TA81 110 aa6.27□□□□□ -1.41
NEDD8-204ENST00000526430 H0YGX0 51 aa6.26□□□□□ -1.41
NEDD8-204ENST00000526430 Q1RN00 199 aa6.25□□□□□ -1.41
NEDD8-204ENST00000526430 Q6ZQY7 126 aa6.25□□□□□ -1.41
NEDD8-204ENST00000526430 DEFB105AQ8NG35 78 aa6.25□□□□□ -1.41
NEDD8-204ENST00000526430 TYMSOSQ8TAI1 123 aa6.25□□□□□ -1.41
NEDD8-204ENST00000526430 CLEC2BQ92478 149 aa6.25□□□□□ -1.41
NEDD8-204ENST00000526430 SNHG12Q9BXW3 62 aa6.25□□□□□ -1.41
NEDD8-204ENST00000526430 TEX49A0A1B0GTD5 131 aa6.24□□□□□ -1.41
NEDD8-204ENST00000526430 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.23□□□□□ -1.41
NEDD8-204ENST00000526430 NAA38Q9BRA0 125 aaKnown RBP6.23□□□□□ -1.41
NEDD8-204ENST00000526430 TAX1BP3O14907 124 aa6.22□□□□□ -1.41
NEDD8-204ENST00000526430 IGLV9-49A0A0B4J1Y8 123 aa6.21□□□□□ -1.42
NEDD8-204ENST00000526430 A0A1B0GX51 115 aa6.21□□□□□ -1.42
NEDD8-204ENST00000526430 SLC25A20O43772 301 aa6.21□□□□□ -1.42
NEDD8-204ENST00000526430 MOBPQ13875 183 aa6.21□□□□□ -1.42
NEDD8-204ENST00000526430 BATFQ16520 125 aa6.21□□□□□ -1.42
NEDD8-204ENST00000526430 SSBP3-AS1Q7Z2R9 100 aa6.21□□□□□ -1.42
NEDD8-204ENST00000526430 Q8NBF4 154 aa6.21□□□□□ -1.42
NEDD8-204ENST00000526430 A0A0G2JQZ4 141 aa6.2□□□□□ -1.42
NEDD8-204ENST00000526430 PSMB2P49721 201 aa6.2□□□□□ -1.42
NEDD8-204ENST00000526430 LINC00304Q8N9R0 145 aa6.19□□□□□ -1.42
NEDD8-204ENST00000526430 RETNLBQ9BQ08 111 aa6.19□□□□□ -1.42
NEDD8-204ENST00000526430 LAMTOR3Q9UHA4 124 aa6.19□□□□□ -1.42
NEDD8-204ENST00000526430 IGLV7-46A0A075B6I9 117 aa6.18□□□□□ -1.42
NEDD8-204ENST00000526430 LST1O00453 97 aa6.18□□□□□ -1.42
NEDD8-204ENST00000526430 ASB16-AS1Q495Z4 193 aa6.18□□□□□ -1.42
NEDD8-204ENST00000526430 IGLV8-61A0A075B6I0 122 aa6.17□□□□□ -1.42
NEDD8-204ENST00000526430 C9orf118A6NHY6 69 aa6.17□□□□□ -1.42
NEDD8-204ENST00000526430 PCP4L1A6NKN8 68 aa6.17□□□□□ -1.42
NEDD8-204ENST00000526430 TCL1BO95988 128 aa6.17□□□□□ -1.42
NEDD8-204ENST00000526430 COX6CP09669 75 aa6.17□□□□□ -1.42
NEDD8-204ENST00000526430 H3BUT2 72 aa6.16□□□□□ -1.42
NEDD8-204ENST00000526430 TRACP01848 142 aa6.16□□□□□ -1.42
NEDD8-204ENST00000526430 LORP23490 312 aaPredicted RBP6.16□□□□□ -1.42
NEDD8-204ENST00000526430 PPDPFLQ8WWR9 84 aa6.16□□□□□ -1.42
NEDD8-204ENST00000526430 KRTAP4-1Q9BYQ7 146 aa6.16□□□□□ -1.42
NEDD8-204ENST00000526430 SCGB1C2P0DMR2 95 aa6.15□□□□□ -1.42
NEDD8-204ENST00000526430 OCIAD2Q56VL3 154 aa6.15□□□□□ -1.42
NEDD8-204ENST00000526430 C9orf153Q5TBE3 101 aa6.15□□□□□ -1.42
NEDD8-204ENST00000526430 SPAG11AQ6PDA7 123 aa6.14□□□□□ -1.43
NEDD8-204ENST00000526430 NDUFV3P56181 108 aaKnown RBP6.13□□□□□ -1.43
NEDD8-204ENST00000526430 SPINK1P00995 79 aa6.12□□□□□ -1.43
NEDD8-204ENST00000526430 IGFL1Q6UW32 110 aa6.12□□□□□ -1.43
NEDD8-204ENST00000526430 A0A1W2PPM0 123 aa6.11□□□□□ -1.43
NEDD8-204ENST00000526430 SNCGO76070 127 aa6.11□□□□□ -1.43
NEDD8-204ENST00000526430 MT1HP80294 61 aa6.11□□□□□ -1.43
NEDD8-204ENST00000526430 ORMDL1Q9P0S3 153 aa6.11□□□□□ -1.43
NEDD8-204ENST00000526430 RPS29P62273 56 aaKnown RBP6.1□□□□□ -1.43
NEDD8-204ENST00000526430 CD164Q04900 197 aa6.1□□□□□ -1.43
NEDD8-204ENST00000526430 COL5A1-AS1Q5SY13 56 aa6.1□□□□□ -1.43
NEDD8-204ENST00000526430 HRCT1Q6UXD1 115 aa6.1□□□□□ -1.43
NEDD8-204ENST00000526430 BAALC-AS2P0C853 105 aa6.09□□□□□ -1.43
NEDD8-204ENST00000526430 FABP2P12104 132 aa6.09□□□□□ -1.43
NEDD8-204ENST00000526430 SEC61BP60468 96 aaKnown RBP6.09□□□□□ -1.43
NEDD8-204ENST00000526430 ATXN8Q156A1 80 aa6.09□□□□□ -1.43
NEDD8-204ENST00000526430 TRBV20-1A0A075B6N2 111 aa6.08□□□□□ -1.44
NEDD8-204ENST00000526430 TMEM256-PLSCR3K7ERE1 68 aa6.08□□□□□ -1.44
NEDD8-204ENST00000526430 DNAL4O96015 105 aa6.08□□□□□ -1.44
NEDD8-204ENST00000526430 KRTAP10-6P60371 365 aaPredicted RBP6.08□□□□□ -1.44
NEDD8-204ENST00000526430 UBE2V1Q13404 147 aa6.08□□□□□ -1.44
NEDD8-204ENST00000526430 KRTAP19-2Q3LHN2 52 aa6.08□□□□□ -1.44
NEDD8-204ENST00000526430 H3BMG7 143 aa6.07□□□□□ -1.44
NEDD8-204ENST00000526430 Q5XG85 94 aa6.07□□□□□ -1.44
NEDD8-204ENST00000526430 Q6JHZ5 121 aa6.07□□□□□ -1.44
NEDD8-204ENST00000526430 A0A1W2PNM2 257 aa6.06□□□□□ -1.44
NEDD8-204ENST00000526430 F8WEM9 126 aa6.06□□□□□ -1.44
NEDD8-204ENST00000526430 H3BQ85 93 aa6.06□□□□□ -1.44
NEDD8-204ENST00000526430 KRTAP13-3Q3SY46 172 aa6.05□□□□□ -1.44
NEDD8-204ENST00000526430 Q6Q795 121 aa6.05□□□□□ -1.44
NEDD8-204ENST00000526430 FP248Q71RG6 208 aaPredicted RBP6.05□□□□□ -1.44
NEDD8-204ENST00000526430 TRBV7-4A0A0J9YYF1 115 aa6.04□□□□□ -1.44
NEDD8-204ENST00000526430 TRBV7-7A0A0K0K1E9 115 aa6.04□□□□□ -1.44
NEDD8-204ENST00000526430 C9JAW5 83 aa6.04□□□□□ -1.44
NEDD8-204ENST00000526430 OBSCN-AS1Q96MR7 158 aa6.04□□□□□ -1.44
NEDD8-204ENST00000526430 LYRM7Q5U5X0 104 aa6.03□□□□□ -1.44
NEDD8-204ENST00000526430 ANKRD29Q8N6D5 301 aa6.03□□□□□ -1.44
NEDD8-204ENST00000526430 SPCS1Q9Y6A9 102 aa6.03□□□□□ -1.44
NEDD8-204ENST00000526430 A0A1B0GV72 72 aa6.02□□□□□ -1.45
NEDD8-204ENST00000526430 C1orf195Q5TG92 126 aa6.02□□□□□ -1.45
NEDD8-204ENST00000526430 MTURNQ8N3F0 131 aa6.02□□□□□ -1.45
NEDD8-204ENST00000526430 PRO0461Q9UI25 63 aa6.02□□□□□ -1.45
NEDD8-204ENST00000526430 K7EP34 96 aa6□□□□□ -1.45
NEDD8-204ENST00000526430 TEN1Q86WV5 123 aa6□□□□□ -1.45
NEDD8-204ENST00000526430 SSPOA2VEC9 5147 aa5.99□□□□□ -1.45
NEDD8-204ENST00000526430 RBM3P98179 157 aaKnown RBP5.99□□□□□ -1.45
NEDD8-204ENST00000526430 H3BT86 120 aa5.98□□□□□ -1.45
NEDD8-204ENST00000526430 Q96NJ1 140 aa5.98□□□□□ -1.45
NEDD8-204ENST00000526430 LIMD2Q9BT23 127 aa5.98□□□□□ -1.45
NEDD8-204ENST00000526430 FCGBPQ9Y6R7 5405 aaPredicted RBP5.96□□□□□ -1.46
NEDD8-204ENST00000526430 A0A087WSZ3 146 aa5.96□□□□□ -1.46
NEDD8-204ENST00000526430 LOC110117498A0A087WWA1 95 aa5.96□□□□□ -1.46
NEDD8-204ENST00000526430 Q6ZQT0 140 aa5.96□□□□□ -1.46
NEDD8-204ENST00000526430 SYNE2Q8WXH0 6885 aaKnown RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms