RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 PLNP26678 52 aa0.61□□□□□ -2.31
USP47-206ENST00000525367 CMC2Q9NRP2 79 aa0.61□□□□□ -2.31
USP47-206ENST00000525367 KNL1Q8NG31 2342 aa0.61□□□□□ -2.31
USP47-206ENST00000525367 PRXQ9BXM0 1461 aa0.61□□□□□ -2.31
USP47-206ENST00000525367 NCOR1O75376 2440 aa0.6□□□□□ -2.31
USP47-206ENST00000525367 ABCA2Q9BZC7 2435 aa0.59□□□□□ -2.31
USP47-206ENST00000525367 H0YGX0 51 aa0.59□□□□□ -2.31
USP47-206ENST00000525367 ABRACLQ9P1F3 81 aa0.59□□□□□ -2.31
USP47-206ENST00000525367 SYCP2Q9BX26 1530 aa0.59□□□□□ -2.32
USP47-206ENST00000525367 NCOR2Q9Y618 2525 aa0.58□□□□□ -2.32
USP47-206ENST00000525367 PREX2Q70Z35 1606 aa0.58□□□□□ -2.32
USP47-206ENST00000525367 CHD8Q9HCK8 2581 aa0.58□□□□□ -2.32
USP47-206ENST00000525367 GLI2P10070 1586 aa0.57□□□□□ -2.32
USP47-206ENST00000525367 ALS2Q96Q42 1657 aa0.57□□□□□ -2.32
USP47-206ENST00000525367 FANCD2Q9BXW9 1451 aa0.57□□□□□ -2.32
USP47-206ENST00000525367 TMEM167BQ9NRX6 74 aa0.57□□□□□ -2.32
USP47-206ENST00000525367 SMIM27A0A1W2PRY6 76 aa0.56□□□□□ -2.32
USP47-206ENST00000525367 C6orf48Q9UBA6 75 aa0.56□□□□□ -2.32
USP47-206ENST00000525367 TIMM8BQ9Y5J9 83 aaPredicted RBP0.56□□□□□ -2.32
USP47-206ENST00000525367 EP300Q09472 2414 aaPredicted RBP0.56□□□□□ -2.32
USP47-206ENST00000525367 REV3LO60673 3130 aa0.55□□□□□ -2.32
USP47-206ENST00000525367 PDE4DIPQ5VU43 2346 aa0.55□□□□□ -2.32
USP47-206ENST00000525367 HIVEP3Q5T1R4 2406 aa0.55□□□□□ -2.32
USP47-206ENST00000525367 EFCAB6Q5THR3 1501 aa0.55□□□□□ -2.32
USP47-206ENST00000525367 IGIPA6NJ69 53 aa0.55□□□□□ -2.32
USP47-206ENST00000525367 CLASP1Q7Z460 1538 aa0.54□□□□□ -2.32
USP47-206ENST00000525367 UGGT1Q9NYU2 1555 aa0.54□□□□□ -2.32
USP47-206ENST00000525367 MAST1Q9Y2H9 1570 aa0.54□□□□□ -2.32
USP47-206ENST00000525367 ADCY10Q96PN6 1610 aa0.54□□□□□ -2.32
USP47-206ENST00000525367 TNXBP22105 4242 aa0.53□□□□□ -2.32
USP47-206ENST00000525367 LINC01546A6NGU7 62 aa0.53□□□□□ -2.32
USP47-206ENST00000525367 SPRR2DP22532 72 aa0.53□□□□□ -2.32
USP47-206ENST00000525367 LRP1Q07954 4544 aaKnown RBP0.53□□□□□ -2.33
USP47-206ENST00000525367 LY75O60449 1722 aa0.52□□□□□ -2.33
USP47-206ENST00000525367 LINC00308Q8TCZ7 52 aa0.52□□□□□ -2.33
USP47-206ENST00000525367 PKD1L1Q8TDX9 2849 aa0.52□□□□□ -2.33
USP47-206ENST00000525367 WT1-ASQ06250 92 aa0.51□□□□□ -2.33
USP47-206ENST00000525367 ABCC8Q09428 1581 aa0.51□□□□□ -2.33
USP47-206ENST00000525367 SMIM2Q9BVW6 85 aa0.51□□□□□ -2.33
USP47-206ENST00000525367 UBR5O95071 2799 aaPredicted RBP0.51□□□□□ -2.33
USP47-206ENST00000525367 IGSF10Q6WRI0 2623 aa0.51□□□□□ -2.33
USP47-206ENST00000525367 MROH2AA6NES4 1674 aa0.5□□□□□ -2.33
USP47-206ENST00000525367 AGLP35573 1532 aa0.5□□□□□ -2.33
USP47-206ENST00000525367 BSNQ9UPA5 3926 aa0.5□□□□□ -2.33
USP47-206ENST00000525367 PHGR1C9JFL3 82 aa0.5□□□□□ -2.33
USP47-206ENST00000525367 H3BUA1 57 aa0.5□□□□□ -2.33
USP47-206ENST00000525367 RPS27P42677 84 aaKnown RBP0.5□□□□□ -2.33
USP47-206ENST00000525367 SNRPGP62308 76 aaKnown RBP0.5□□□□□ -2.33
USP47-206ENST00000525367 PRLHP81277 87 aa0.5□□□□□ -2.33
USP47-206ENST00000525367 RPS27LQ71UM5 84 aaKnown RBP0.5□□□□□ -2.33
USP47-206ENST00000525367 FAT2Q9NYQ8 4349 aa0.5□□□□□ -2.33
USP47-206ENST00000525367 KIF1AQ12756 1690 aa0.49□□□□□ -2.33
USP47-206ENST00000525367 TRANK1O15050 2925 aa0.49□□□□□ -2.33
USP47-206ENST00000525367 CROCC2H7BZ55 1655 aa0.49□□□□□ -2.33
USP47-206ENST00000525367 ITSN2Q9NZM3 1697 aa0.49□□□□□ -2.33
USP47-206ENST00000525367 IQGAP2Q13576 1575 aa0.49□□□□□ -2.33
USP47-206ENST00000525367 HUWE1Q7Z6Z7 4374 aaKnown RBP0.48□□□□□ -2.33
USP47-206ENST00000525367 TOP2AP11388 1531 aaKnown RBP0.48□□□□□ -2.33
USP47-206ENST00000525367 BPTFQ12830 3046 aa0.48□□□□□ -2.33
USP47-206ENST00000525367 A0A1B0GUL6 1792 aa0.47□□□□□ -2.33
USP47-206ENST00000525367 NDUFA1O15239 70 aa0.47□□□□□ -2.33
USP47-206ENST00000525367 TFF3Q07654 80 aa0.47□□□□□ -2.33
USP47-206ENST00000525367 WFDC10BQ8IUB3 73 aa0.47□□□□□ -2.33
USP47-206ENST00000525367 DEFB106AQ8N104 65 aa0.47□□□□□ -2.33
USP47-206ENST00000525367 CACNA1AO00555 2505 aa0.46□□□□□ -2.34
USP47-206ENST00000525367 ABCA5Q8WWZ7 1642 aa0.46□□□□□ -2.34
USP47-206ENST00000525367 DEFB131AP59861 70 aa0.46□□□□□ -2.34
USP47-206ENST00000525367 NOP10Q9NPE3 64 aaKnown RBP0.46□□□□□ -2.34
USP47-206ENST00000525367 KAAG1Q9UBP8 84 aa0.46□□□□□ -2.34
USP47-206ENST00000525367 S4R3F8 94 aa0.46□□□□□ -2.34
USP47-206ENST00000525367 FAT4Q6V0I7 4981 aa0.46□□□□□ -2.34
USP47-206ENST00000525367 HRNRQ86YZ3 2850 aaPredicted RBP0.46□□□□□ -2.34
USP47-206ENST00000525367 ANKRD36CQ5JPF3 1778 aa0.45□□□□□ -2.34
USP47-206ENST00000525367 TRPM2O94759 1503 aa0.45□□□□□ -2.34
USP47-206ENST00000525367 SAMD9LQ8IVG5 1584 aa0.45□□□□□ -2.34
USP47-206ENST00000525367 NRXN3Q9Y4C0 1643 aa0.44□□□□□ -2.34
USP47-206ENST00000525367 CELSR1Q9NYQ6 3014 aa0.43□□□□□ -2.34
USP47-206ENST00000525367 FAM208AQ9UK61 1670 aaKnown RBP0.43□□□□□ -2.34
USP47-206ENST00000525367 IGLV5-48A0A075B6I7 105 aa0.43□□□□□ -2.34
USP47-206ENST00000525367 SPRR2BP35325 72 aa0.43□□□□□ -2.34
USP47-206ENST00000525367 WNK1Q9H4A3 2382 aa0.43□□□□□ -2.34
USP47-206ENST00000525367 AHNAKQ09666 5890 aaKnown RBP0.43□□□□□ -2.34
USP47-206ENST00000525367 MAP1BP46821 2468 aaKnown RBP0.42□□□□□ -2.34
USP47-206ENST00000525367 APC2O95996 2303 aa0.42□□□□□ -2.34
USP47-206ENST00000525367 ATP7AQ04656 1500 aa0.42□□□□□ -2.34
USP47-206ENST00000525367 PRKDCP78527 4128 aaKnown RBP0.41□□□□□ -2.34
USP47-206ENST00000525367 DDX60Q8IY21 1712 aaKnown RBP0.41□□□□□ -2.34
USP47-206ENST00000525367 LMO7Q8WWI1 1683 aa0.41□□□□□ -2.34
USP47-206ENST00000525367 DMBT1Q9UGM3 2413 aaPredicted RBP0.41□□□□□ -2.34
USP47-206ENST00000525367 A8MTW9 85 aa0.41□□□□□ -2.34
USP47-206ENST00000525367 M0QY20 66 aa0.41□□□□□ -2.34
USP47-206ENST00000525367 SETXQ7Z333 2677 aaKnown RBP0.41□□□□□ -2.34
USP47-206ENST00000525367 HECTD1Q9ULT8 2610 aa0.41□□□□□ -2.34
USP47-206ENST00000525367 CREBBPQ92793 2442 aa0.4□□□□□ -2.34
USP47-206ENST00000525367 DSPP15924 2871 aaKnown RBP0.4□□□□□ -2.34
USP47-206ENST00000525367 NFAT5O94916 1531 aa0.4□□□□□ -2.35
USP47-206ENST00000525367 POLR2KP53803 58 aaKnown RBP0.4□□□□□ -2.35
USP47-206ENST00000525367 MAST4O15021 2626 aa0.4□□□□□ -2.35
USP47-206ENST00000525367 AKAP13Q12802 2813 aa0.4□□□□□ -2.35
USP47-206ENST00000525367 PCNX1Q96RV3 2341 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms