RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 SNHG12Q9BXW3 62 aa3.83□□□□□ -1.8
CD44-214ENST00000525211 KRTAP29-1A8MX34 341 aaPredicted RBP3.82□□□□□ -1.8
CD44-214ENST00000525211 KRTAP15-1Q3LI76 137 aa3.82□□□□□ -1.8
CD44-214ENST00000525211 LINC00575Q6W349 94 aa3.82□□□□□ -1.8
CD44-214ENST00000525211 CLEC2BQ92478 149 aa3.82□□□□□ -1.8
CD44-214ENST00000525211 DMBT1Q9UGM3 2413 aaPredicted RBP3.81□□□□□ -1.8
CD44-214ENST00000525211 A0A0G2JQZ4 141 aa3.81□□□□□ -1.8
CD44-214ENST00000525211 TAX1BP3O14907 124 aa3.81□□□□□ -1.8
CD44-214ENST00000525211 GAGE2AQ6NT46 116 aa3.81□□□□□ -1.8
CD44-214ENST00000525211 TRBV7-6A0A0J9YX20 115 aa3.8□□□□□ -1.8
CD44-214ENST00000525211 Q1RN00 199 aa3.8□□□□□ -1.8
CD44-214ENST00000525211 LINC00483Q53H64 154 aa3.8□□□□□ -1.8
CD44-214ENST00000525211 SMIM29Q86T20 159 aa3.8□□□□□ -1.8
CD44-214ENST00000525211 Q8N377 158 aa3.8□□□□□ -1.8
CD44-214ENST00000525211 DEFB105AQ8NG35 78 aa3.8□□□□□ -1.8
CD44-214ENST00000525211 M0R143 59 aa3.79□□□□□ -1.8
CD44-214ENST00000525211 OXTP01178 125 aa3.79□□□□□ -1.8
CD44-214ENST00000525211 KRTAP4-8A0A0G2JLE6 195 aa3.78□□□□□ -1.8
CD44-214ENST00000525211 hADV29S1A0JD25 119 aa3.78□□□□□ -1.8
CD44-214ENST00000525211 Q6ZQY7 126 aa3.78□□□□□ -1.8
CD44-214ENST00000525211 DHRS4-AS1Q9P1J3 65 aa3.78□□□□□ -1.8
CD44-214ENST00000525211 IGLV5-48A0A075B6I7 105 aa3.77□□□□□ -1.81
CD44-214ENST00000525211 IGLV9-49A0A0B4J1Y8 123 aa3.77□□□□□ -1.81
CD44-214ENST00000525211 SPRR1BP22528 89 aa3.77□□□□□ -1.81
CD44-214ENST00000525211 PSMB2P49721 201 aa3.77□□□□□ -1.81
CD44-214ENST00000525211 LCE1DQ5T752 114 aa3.77□□□□□ -1.81
CD44-214ENST00000525211 CBY1Q9Y3M2 126 aa3.77□□□□□ -1.81
CD44-214ENST00000525211 H3BUT2 72 aa3.76□□□□□ -1.81
CD44-214ENST00000525211 TCL1BO95988 128 aa3.76□□□□□ -1.81
CD44-214ENST00000525211 CRYGAP11844 174 aa3.76□□□□□ -1.81
CD44-214ENST00000525211 MOBPQ13875 183 aa3.76□□□□□ -1.81
CD44-214ENST00000525211 VAMP3Q15836 100 aa3.76□□□□□ -1.81
CD44-214ENST00000525211 H0YGX0 51 aa3.75□□□□□ -1.81
CD44-214ENST00000525211 FAM229BQ4G0N7 80 aa3.75□□□□□ -1.81
CD44-214ENST00000525211 TYMSOSQ8TAI1 123 aa3.75□□□□□ -1.81
CD44-214ENST00000525211 HMCN2Q8NDA2 5059 aa3.75□□□□□ -1.81
CD44-214ENST00000525211 TEX49A0A1B0GTD5 131 aa3.74□□□□□ -1.81
CD44-214ENST00000525211 LST1O00453 97 aa3.74□□□□□ -1.81
CD44-214ENST00000525211 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.74□□□□□ -1.81
CD44-214ENST00000525211 Q8NBF4 154 aa3.74□□□□□ -1.81
CD44-214ENST00000525211 ZNF706Q9Y5V0 76 aaPredicted RBP3.74□□□□□ -1.81
CD44-214ENST00000525211 A0A1B0GV72 72 aa3.73□□□□□ -1.81
CD44-214ENST00000525211 A0A1W2PPM0 123 aa3.73□□□□□ -1.81
CD44-214ENST00000525211 SLC25A20O43772 301 aa3.73□□□□□ -1.81
CD44-214ENST00000525211 SCGB1C2P0DMR2 95 aa3.73□□□□□ -1.81
CD44-214ENST00000525211 LCE5AQ5TCM9 118 aa3.73□□□□□ -1.81
CD44-214ENST00000525211 MTURNQ8N3F0 131 aa3.73□□□□□ -1.81
CD44-214ENST00000525211 COL5A1-AS1Q5SY13 56 aa3.72□□□□□ -1.81
CD44-214ENST00000525211 C9orf153Q5TBE3 101 aa3.72□□□□□ -1.81
CD44-214ENST00000525211 HRCT1Q6UXD1 115 aa3.72□□□□□ -1.81
CD44-214ENST00000525211 LPAP08519 4548 aa3.72□□□□□ -1.81
CD44-214ENST00000525211 RNF213Q63HN8 5207 aa3.72□□□□□ -1.81
CD44-214ENST00000525211 A0A1B0GX51 115 aa3.71□□□□□ -1.82
CD44-214ENST00000525211 TRACP01848 142 aa3.7□□□□□ -1.82
CD44-214ENST00000525211 COX6CP09669 75 aa3.7□□□□□ -1.82
CD44-214ENST00000525211 FABP2P12104 132 aa3.7□□□□□ -1.82
CD44-214ENST00000525211 IGFL1Q6UW32 110 aa3.7□□□□□ -1.82
CD44-214ENST00000525211 LINC00304Q8N9R0 145 aa3.7□□□□□ -1.82
CD44-214ENST00000525211 RETNLBQ9BQ08 111 aa3.7□□□□□ -1.82
CD44-214ENST00000525211 LAMTOR3Q9UHA4 124 aa3.7□□□□□ -1.82
CD44-214ENST00000525211 IGLV8-61A0A075B6I0 122 aa3.69□□□□□ -1.82
CD44-214ENST00000525211 C9JAW5 83 aa3.69□□□□□ -1.82
CD44-214ENST00000525211 H3BMG7 143 aa3.69□□□□□ -1.82
CD44-214ENST00000525211 BAALC-AS2P0C853 105 aa3.69□□□□□ -1.82
CD44-214ENST00000525211 NDUFV3P56181 108 aaKnown RBP3.69□□□□□ -1.82
CD44-214ENST00000525211 ATXN8Q156A1 80 aa3.69□□□□□ -1.82
CD44-214ENST00000525211 OCIAD2Q56VL3 154 aa3.69□□□□□ -1.82
CD44-214ENST00000525211 SSBP3-AS1Q7Z2R9 100 aa3.69□□□□□ -1.82
CD44-214ENST00000525211 ORMDL1Q9P0S3 153 aa3.68□□□□□ -1.82
CD44-214ENST00000525211 PRO0461Q9UI25 63 aa3.68□□□□□ -1.82
CD44-214ENST00000525211 A0A1W2PNM2 257 aa3.67□□□□□ -1.82
CD44-214ENST00000525211 MPLKIPQ8TAP9 179 aa3.67□□□□□ -1.82
CD44-214ENST00000525211 SPCS1Q9Y6A9 102 aa3.67□□□□□ -1.82
CD44-214ENST00000525211 LRP2P98164 4655 aa3.67□□□□□ -1.82
CD44-214ENST00000525211 K7EP34 96 aa3.66□□□□□ -1.82
CD44-214ENST00000525211 DNAL4O96015 105 aa3.66□□□□□ -1.82
CD44-214ENST00000525211 PPDPFLQ8WWR9 84 aa3.66□□□□□ -1.82
CD44-214ENST00000525211 TRBV20-1A0A075B6N2 111 aa3.65□□□□□ -1.83
CD44-214ENST00000525211 A0A1B0GV90 55 aa3.65□□□□□ -1.83
CD44-214ENST00000525211 TMEM256-PLSCR3K7ERE1 68 aa3.65□□□□□ -1.83
CD44-214ENST00000525211 UBE2V1Q13404 147 aa3.65□□□□□ -1.83
CD44-214ENST00000525211 TRBV7-4A0A0J9YYF1 115 aa3.64□□□□□ -1.83
CD44-214ENST00000525211 F8WEM9 126 aa3.64□□□□□ -1.83
CD44-214ENST00000525211 ANKRD29Q8N6D5 301 aa3.64□□□□□ -1.83
CD44-214ENST00000525211 TRBV7-7A0A0K0K1E9 115 aa3.63□□□□□ -1.83
CD44-214ENST00000525211 SNCGO76070 127 aa3.63□□□□□ -1.83
CD44-214ENST00000525211 SPINK1P00995 79 aa3.63□□□□□ -1.83
CD44-214ENST00000525211 C1orf195Q5TG92 126 aa3.63□□□□□ -1.83
CD44-214ENST00000525211 LYRM7Q5U5X0 104 aa3.63□□□□□ -1.83
CD44-214ENST00000525211 SPAG11AQ6PDA7 123 aa3.63□□□□□ -1.83
CD44-214ENST00000525211 OBSCN-AS1Q96MR7 158 aa3.63□□□□□ -1.83
CD44-214ENST00000525211 CD164Q04900 197 aa3.62□□□□□ -1.83
CD44-214ENST00000525211 PRR4Q16378 134 aa3.62□□□□□ -1.83
CD44-214ENST00000525211 Q6JHZ5 121 aa3.62□□□□□ -1.83
CD44-214ENST00000525211 KRTAP4-9Q9BYQ8 210 aa3.62□□□□□ -1.83
CD44-214ENST00000525211 KRTAP4-7Q9BYR0 210 aa3.62□□□□□ -1.83
CD44-214ENST00000525211 C14orf132Q9NPU4 83 aa3.62□□□□□ -1.83
CD44-214ENST00000525211 H3BT86 120 aa3.61□□□□□ -1.83
CD44-214ENST00000525211 Q6ZQT0 140 aa3.61□□□□□ -1.83
CD44-214ENST00000525211 Q96NJ1 140 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms