RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 OCIAD2Q56VL3 154 aa3.12□□□□□ -1.91
HMGB1P40-201ENST00000525121 PPDPFLQ8WWR9 84 aa3.12□□□□□ -1.91
HMGB1P40-201ENST00000525121 FAT3Q8TDW7 4589 aa3.12□□□□□ -1.91
HMGB1P40-201ENST00000525121 A0A1B0GX51 115 aa3.11□□□□□ -1.91
HMGB1P40-201ENST00000525121 DNAL4O96015 105 aa3.11□□□□□ -1.91
HMGB1P40-201ENST00000525121 FP248Q71RG6 208 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P40-201ENST00000525121 RETNLBQ9BQ08 111 aa3.11□□□□□ -1.91
HMGB1P40-201ENST00000525121 SNHG12Q9BXW3 62 aa3.11□□□□□ -1.91
HMGB1P40-201ENST00000525121 IGLV7-46A0A075B6I9 117 aa3.1□□□□□ -1.91
HMGB1P40-201ENST00000525121 H3BQ85 93 aa3.1□□□□□ -1.91
HMGB1P40-201ENST00000525121 K7ERJ3 54 aa3.1□□□□□ -1.91
HMGB1P40-201ENST00000525121 TRIAP1O43715 76 aa3.1□□□□□ -1.91
HMGB1P40-201ENST00000525121 CD164Q04900 197 aa3.1□□□□□ -1.91
HMGB1P40-201ENST00000525121 Q6JHZ5 121 aa3.1□□□□□ -1.91
HMGB1P40-201ENST00000525121 HRCT1Q6UXD1 115 aa3.1□□□□□ -1.91
HMGB1P40-201ENST00000525121 Q8N377 158 aa3.1□□□□□ -1.91
HMGB1P40-201ENST00000525121 SCGB1C2P0DMR2 95 aa3.09□□□□□ -1.91
HMGB1P40-201ENST00000525121 LINC01547P58512 204 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P40-201ENST00000525121 SMIM29Q86T20 159 aa3.09□□□□□ -1.91
HMGB1P40-201ENST00000525121 HERC1Q15751 4861 aa3.08□□□□□ -1.92
HMGB1P40-201ENST00000525121 TCL1BO95988 128 aa3.08□□□□□ -1.92
HMGB1P40-201ENST00000525121 FABP2P12104 132 aa3.08□□□□□ -1.92
HMGB1P40-201ENST00000525121 TPRXLQ17RH7 258 aa3.08□□□□□ -1.92
HMGB1P40-201ENST00000525121 LYRM7Q5U5X0 104 aa3.08□□□□□ -1.92
HMGB1P40-201ENST00000525121 CLEC2BQ92478 149 aa3.08□□□□□ -1.92
HMGB1P40-201ENST00000525121 CDIP1Q9H305 208 aa3.08□□□□□ -1.92
HMGB1P40-201ENST00000525121 ORMDL1Q9P0S3 153 aa3.08□□□□□ -1.92
HMGB1P40-201ENST00000525121 TNXBP22105 4242 aa3.08□□□□□ -1.92
HMGB1P40-201ENST00000525121 FAM218AQ96MZ4 157 aa3.07□□□□□ -1.92
HMGB1P40-201ENST00000525121 IGLV8-61A0A075B6I0 122 aa3.06□□□□□ -1.92
HMGB1P40-201ENST00000525121 H3BUT2 72 aa3.06□□□□□ -1.92
HMGB1P40-201ENST00000525121 TMEM256-PLSCR3K7ERE1 68 aa3.06□□□□□ -1.92
HMGB1P40-201ENST00000525121 NDUFV3P56181 108 aaKnown RBP3.06□□□□□ -1.92
HMGB1P40-201ENST00000525121 BATFQ16520 125 aa3.06□□□□□ -1.92
HMGB1P40-201ENST00000525121 H3BMG7 143 aa3.05□□□□□ -1.92
HMGB1P40-201ENST00000525121 TRACP01848 142 aa3.05□□□□□ -1.92
HMGB1P40-201ENST00000525121 Q5XG85 94 aa3.05□□□□□ -1.92
HMGB1P40-201ENST00000525121 IGFL1Q6UW32 110 aa3.05□□□□□ -1.92
HMGB1P40-201ENST00000525121 SS18L2Q9UHA2 77 aa3.05□□□□□ -1.92
HMGB1P40-201ENST00000525121 A0A0G2JQZ4 141 aa3.04□□□□□ -1.92
HMGB1P40-201ENST00000525121 TRBV7-7A0A0K0K1E9 115 aa3.04□□□□□ -1.92
HMGB1P40-201ENST00000525121 LST1O00453 97 aa3.04□□□□□ -1.92
HMGB1P40-201ENST00000525121 ATXN8Q156A1 80 aa3.04□□□□□ -1.92
HMGB1P40-201ENST00000525121 UBE2V1Q13404 147 aa3.03□□□□□ -1.92
HMGB1P40-201ENST00000525121 KRTAP13-3Q3SY46 172 aa3.03□□□□□ -1.92
HMGB1P40-201ENST00000525121 TEN1Q86WV5 123 aa3.03□□□□□ -1.92
HMGB1P40-201ENST00000525121 ANKRD29Q8N6D5 301 aa3.03□□□□□ -1.92
HMGB1P40-201ENST00000525121 TRBV20-1A0A075B6N2 111 aa3.02□□□□□ -1.93
HMGB1P40-201ENST00000525121 A0A1B0GV72 72 aa3.02□□□□□ -1.93
HMGB1P40-201ENST00000525121 PCP4P48539 62 aa3.02□□□□□ -1.93
HMGB1P40-201ENST00000525121 ASB16-AS1Q495Z4 193 aa3.02□□□□□ -1.93
HMGB1P40-201ENST00000525121 C1orf195Q5TG92 126 aa3.02□□□□□ -1.93
HMGB1P40-201ENST00000525121 Q6Q795 121 aa3.02□□□□□ -1.93
HMGB1P40-201ENST00000525121 DSCR8Q96T75 97 aa3.02□□□□□ -1.93
HMGB1P40-201ENST00000525121 NAA38Q9BRA0 125 aaKnown RBP3.02□□□□□ -1.93
HMGB1P40-201ENST00000525121 A0A0U1RQV1 116 aa3.01□□□□□ -1.93
HMGB1P40-201ENST00000525121 BAALC-AS2P0C853 105 aa3.01□□□□□ -1.93
HMGB1P40-201ENST00000525121 SEC61BP60468 96 aaKnown RBP3.01□□□□□ -1.93
HMGB1P40-201ENST00000525121 RBM3P98179 157 aaKnown RBP3.01□□□□□ -1.93
HMGB1P40-201ENST00000525121 HMCN2Q8NDA2 5059 aa3.01□□□□□ -1.93
HMGB1P40-201ENST00000525121 A0A087WSZ3 146 aa3□□□□□ -1.93
HMGB1P40-201ENST00000525121 TRBV7-4A0A0J9YYF1 115 aa3□□□□□ -1.93
HMGB1P40-201ENST00000525121 C9orf92A6NGG3 77 aa3□□□□□ -1.93
HMGB1P40-201ENST00000525121 C9orf118A6NHY6 69 aa3□□□□□ -1.93
HMGB1P40-201ENST00000525121 CCKP06307 115 aa3□□□□□ -1.93
HMGB1P40-201ENST00000525121 SMCPP49901 116 aaPredicted RBP3□□□□□ -1.93
HMGB1P40-201ENST00000525121 C21orf62-AS1Q17RA5 79 aa3□□□□□ -1.93
HMGB1P40-201ENST00000525121 VPS25Q9BRG1 176 aa3□□□□□ -1.93
HMGB1P40-201ENST00000525121 C9JAW5 83 aa2.99□□□□□ -1.93
HMGB1P40-201ENST00000525121 JMJD7-PLA2G4BH0Y9G9 81 aa2.99□□□□□ -1.93
HMGB1P40-201ENST00000525121 A0A1W2PPM0 123 aa2.98□□□□□ -1.93
HMGB1P40-201ENST00000525121 PDE6GP18545 87 aa2.98□□□□□ -1.93
HMGB1P40-201ENST00000525121 COL5A1-AS1Q5SY13 56 aa2.98□□□□□ -1.93
HMGB1P40-201ENST00000525121 XP32Q5T750 250 aa2.98□□□□□ -1.93
HMGB1P40-201ENST00000525121 SIGMAR1Q99720 223 aa2.98□□□□□ -1.93
HMGB1P40-201ENST00000525121 A0A1W2PNM2 257 aa2.97□□□□□ -1.93
HMGB1P40-201ENST00000525121 TAX1BP3O14907 124 aa2.97□□□□□ -1.93
HMGB1P40-201ENST00000525121 PCP4L1A6NKN8 68 aa2.96□□□□□ -1.94
HMGB1P40-201ENST00000525121 H3BT86 120 aa2.96□□□□□ -1.94
HMGB1P40-201ENST00000525121 SPCS1Q9Y6A9 102 aa2.96□□□□□ -1.94
HMGB1P40-201ENST00000525121 LOC110117498A0A087WWA1 95 aa2.95□□□□□ -1.94
HMGB1P40-201ENST00000525121 A0A1B0GW54 56 aa2.95□□□□□ -1.94
HMGB1P40-201ENST00000525121 IGKV4-1P06312 121 aa2.95□□□□□ -1.94
HMGB1P40-201ENST00000525121 OBSCN-AS1Q96MR7 158 aa2.95□□□□□ -1.94
HMGB1P40-201ENST00000525121 LRP2P98164 4655 aa2.95□□□□□ -1.94
HMGB1P40-201ENST00000525121 J3KT08 172 aa2.94□□□□□ -1.94
HMGB1P40-201ENST00000525121 RPL37P61927 97 aaKnown RBP2.94□□□□□ -1.94
HMGB1P40-201ENST00000525121 Q6ZQT0 140 aa2.94□□□□□ -1.94
HMGB1P40-201ENST00000525121 Q96NJ1 140 aa2.94□□□□□ -1.94
HMGB1P40-201ENST00000525121 C14orf132Q9NPU4 83 aa2.94□□□□□ -1.94
HMGB1P40-201ENST00000525121 UBR4Q5T4S7 5183 aa2.93□□□□□ -1.94
HMGB1P40-201ENST00000525121 NDUFB1O75438 58 aa2.93□□□□□ -1.94
HMGB1P40-201ENST00000525121 PCOTHQ58A44 107 aa2.93□□□□□ -1.94
HMGB1P40-201ENST00000525121 ATP11AUNQ6ZP68 121 aa2.93□□□□□ -1.94
HMGB1P40-201ENST00000525121 GTF2H5Q6ZYL4 71 aa2.93□□□□□ -1.94
HMGB1P40-201ENST00000525121 MTURNQ8N3F0 131 aa2.93□□□□□ -1.94
HMGB1P40-201ENST00000525121 LPAP08519 4548 aa2.93□□□□□ -1.94
HMGB1P40-201ENST00000525121 IGHV6-1A0A0B4J1U7 121 aa2.92□□□□□ -1.94
HMGB1P40-201ENST00000525121 K7EP34 96 aa2.92□□□□□ -1.94
HMGB1P40-201ENST00000525121 LINC00313P59037 77 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms