RNA–Protein interactions for RNA: ENST00000523647.1

SMARCE1P4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 4, humanhuman

BASIC

Gene SMARCE1P4, Length 241 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P4-201ENST00000523647 TTC28Q96AY4 2481 aa1.3□□□□□ -2.2
SMARCE1P4-201ENST00000523647 SPTBN1Q01082 2364 aaKnown RBP1.29□□□□□ -2.2
SMARCE1P4-201ENST00000523647 POLQO75417 2590 aa1.29□□□□□ -2.2
SMARCE1P4-201ENST00000523647 DUOX1Q9NRD9 1551 aa1.29□□□□□ -2.2
SMARCE1P4-201ENST00000523647 FBN3Q75N90 2809 aa1.29□□□□□ -2.2
SMARCE1P4-201ENST00000523647 FCGBPQ9Y6R7 5405 aaPredicted RBP1.28□□□□□ -2.2
SMARCE1P4-201ENST00000523647 CELSR2Q9HCU4 2923 aa1.27□□□□□ -2.21
SMARCE1P4-201ENST00000523647 DSPP15924 2871 aaKnown RBP1.27□□□□□ -2.21
SMARCE1P4-201ENST00000523647 PKDREJQ9NTG1 2253 aa1.27□□□□□ -2.21
SMARCE1P4-201ENST00000523647 DEFB109BQ30KR1 87 aa1.25□□□□□ -2.21
SMARCE1P4-201ENST00000523647 GVINP1Q7Z2Y8 2422 aa1.24□□□□□ -2.21
SMARCE1P4-201ENST00000523647 H3BUA1 57 aa1.24□□□□□ -2.21
SMARCE1P4-201ENST00000523647 TRANK1O15050 2925 aa1.23□□□□□ -2.21
SMARCE1P4-201ENST00000523647 S4R3F8 94 aa1.23□□□□□ -2.21
SMARCE1P4-201ENST00000523647 CSMD3Q7Z407 3707 aa1.23□□□□□ -2.21
SMARCE1P4-201ENST00000523647 IGLV5-48A0A075B6I7 105 aa1.22□□□□□ -2.21
SMARCE1P4-201ENST00000523647 WFDC10BQ8IUB3 73 aa1.22□□□□□ -2.21
SMARCE1P4-201ENST00000523647 KNL1Q8NG31 2342 aa1.21□□□□□ -2.22
SMARCE1P4-201ENST00000523647 ANK2Q01484 3957 aa1.21□□□□□ -2.22
SMARCE1P4-201ENST00000523647 ABCA12Q86UK0 2595 aa1.2□□□□□ -2.22
SMARCE1P4-201ENST00000523647 F8P00451 2351 aa1.2□□□□□ -2.22
SMARCE1P4-201ENST00000523647 SMR3AQ99954 134 aa1.2□□□□□ -2.22
SMARCE1P4-201ENST00000523647 KAAG1Q9UBP8 84 aa1.2□□□□□ -2.22
SMARCE1P4-201ENST00000523647 MROH2BQ7Z745 1585 aa1.2□□□□□ -2.22
SMARCE1P4-201ENST00000523647 PCNX1Q96RV3 2341 aa1.2□□□□□ -2.22
SMARCE1P4-201ENST00000523647 TENM4Q6N022 2769 aa1.19□□□□□ -2.22
SMARCE1P4-201ENST00000523647 CLTCL1P53675 1640 aa1.18□□□□□ -2.22
SMARCE1P4-201ENST00000523647 BDP1A6H8Y1 2624 aa1.18□□□□□ -2.22
SMARCE1P4-201ENST00000523647 IGF2RP11717 2491 aa1.18□□□□□ -2.22
SMARCE1P4-201ENST00000523647 TENM1Q9UKZ4 2725 aa1.17□□□□□ -2.22
SMARCE1P4-201ENST00000523647 PRLHP81277 87 aa1.17□□□□□ -2.22
SMARCE1P4-201ENST00000523647 DEFB131AP59861 70 aa1.16□□□□□ -2.22
SMARCE1P4-201ENST00000523647 SPINK6Q6UWN8 80 aa1.16□□□□□ -2.22
SMARCE1P4-201ENST00000523647 TPRP12270 2363 aaKnown RBP1.16□□□□□ -2.22
SMARCE1P4-201ENST00000523647 MMP24-AS1A0A0U1RRL7 71 aa1.15□□□□□ -2.23
SMARCE1P4-201ENST00000523647 ABCA2Q9BZC7 2435 aa1.15□□□□□ -2.23
SMARCE1P4-201ENST00000523647 KRTAP19-3Q7Z4W3 81 aa1.14□□□□□ -2.23
SMARCE1P4-201ENST00000523647 DEFB106AQ8N104 65 aa1.14□□□□□ -2.23
SMARCE1P4-201ENST00000523647 VWFP04275 2813 aa1.14□□□□□ -2.23
SMARCE1P4-201ENST00000523647 PRRC2CQ9Y520 2896 aaKnown RBP1.14□□□□□ -2.23
SMARCE1P4-201ENST00000523647 PDE4DIPQ5VU43 2346 aa1.14□□□□□ -2.23
SMARCE1P4-201ENST00000523647 GCC2Q8IWJ2 1684 aa1.13□□□□□ -2.23
SMARCE1P4-201ENST00000523647 FBN2P35556 2912 aa1.12□□□□□ -2.23
SMARCE1P4-201ENST00000523647 KRTAP2-3P0C7H8 128 aa1.12□□□□□ -2.23
SMARCE1P4-201ENST00000523647 KRTAP2-4Q9BYR9 128 aa1.12□□□□□ -2.23
SMARCE1P4-201ENST00000523647 KRTAP2-1Q9BYU5 128 aa1.12□□□□□ -2.23
SMARCE1P4-201ENST00000523647 ATRQ13535 2644 aa1.11□□□□□ -2.23
SMARCE1P4-201ENST00000523647 PIEZO1Q92508 2521 aa1.11□□□□□ -2.23
SMARCE1P4-201ENST00000523647 AKAP6Q13023 2319 aa1.11□□□□□ -2.23
SMARCE1P4-201ENST00000523647 FRAS1Q86XX4 4008 aa1.1□□□□□ -2.23
SMARCE1P4-201ENST00000523647 ZNF469Q96JG9 3925 aaPredicted RBP1.1□□□□□ -2.23
SMARCE1P4-201ENST00000523647 POLR2KP53803 58 aaKnown RBP1.1□□□□□ -2.23
SMARCE1P4-201ENST00000523647 CHD6Q8TD26 2715 aa1.09□□□□□ -2.23
SMARCE1P4-201ENST00000523647 AKAP13Q12802 2813 aa1.09□□□□□ -2.23
SMARCE1P4-201ENST00000523647 CSPG4Q6UVK1 2322 aa1.08□□□□□ -2.24
SMARCE1P4-201ENST00000523647 NOP10Q9NPE3 64 aaKnown RBP1.08□□□□□ -2.24
SMARCE1P4-201ENST00000523647 OTOGQ6ZRI0 2925 aa1.08□□□□□ -2.24
SMARCE1P4-201ENST00000523647 APCP25054 2843 aa1.07□□□□□ -2.24
SMARCE1P4-201ENST00000523647 BSNQ9UPA5 3926 aa1.06□□□□□ -2.24
SMARCE1P4-201ENST00000523647 PRKDCP78527 4128 aaKnown RBP1.06□□□□□ -2.24
SMARCE1P4-201ENST00000523647 CELSR1Q9NYQ6 3014 aa1.06□□□□□ -2.24
SMARCE1P4-201ENST00000523647 A0A0C4DFX4 3053 aa1.06□□□□□ -2.24
SMARCE1P4-201ENST00000523647 M0R2T5 61 aa1.05□□□□□ -2.24
SMARCE1P4-201ENST00000523647 SPINK1P00995 79 aa1.05□□□□□ -2.24
SMARCE1P4-201ENST00000523647 DEFB135Q30KP9 77 aa1.05□□□□□ -2.24
SMARCE1P4-201ENST00000523647 FAT2Q9NYQ8 4349 aa1.02□□□□□ -2.25
SMARCE1P4-201ENST00000523647 RPL39P62891 51 aaKnown RBP1.02□□□□□ -2.25
SMARCE1P4-201ENST00000523647 U3KQA8 63 aa1.02□□□□□ -2.25
SMARCE1P4-201ENST00000523647 HECTD1Q9ULT8 2610 aa1.02□□□□□ -2.25
SMARCE1P4-201ENST00000523647 H0YGG7 62 aa1.01□□□□□ -2.25
SMARCE1P4-201ENST00000523647 TNXBP22105 4242 aa1.01□□□□□ -2.25
SMARCE1P4-201ENST00000523647 CLPSL2Q6UWE3 100 aa1□□□□□ -2.25
SMARCE1P4-201ENST00000523647 SPTA1P02549 2419 aa1□□□□□ -2.25
SMARCE1P4-201ENST00000523647 TNRC18O15417 2968 aaPredicted RBP0.98□□□□□ -2.25
SMARCE1P4-201ENST00000523647 A8MTW9 85 aa0.98□□□□□ -2.25
SMARCE1P4-201ENST00000523647 M0QY20 66 aa0.97□□□□□ -2.25
SMARCE1P4-201ENST00000523647 CHD8Q9HCK8 2581 aa0.96□□□□□ -2.26
SMARCE1P4-201ENST00000523647 PRM1P04553 51 aa0.96□□□□□ -2.26
SMARCE1P4-201ENST00000523647 RPL39LQ96EH5 51 aaKnown RBP0.96□□□□□ -2.26
SMARCE1P4-201ENST00000523647 CEP290O15078 2479 aa0.96□□□□□ -2.26
SMARCE1P4-201ENST00000523647 PKD1L2Q7Z442 2459 aa0.96□□□□□ -2.26
SMARCE1P4-201ENST00000523647 EP300Q09472 2414 aaPredicted RBP0.96□□□□□ -2.26
SMARCE1P4-201ENST00000523647 LYSTQ99698 3801 aa0.95□□□□□ -2.26
SMARCE1P4-201ENST00000523647 SRRM2Q9UQ35 2752 aaKnown RBP0.95□□□□□ -2.26
SMARCE1P4-201ENST00000523647 NCOR1O75376 2440 aa0.95□□□□□ -2.26
SMARCE1P4-201ENST00000523647 PKD1L1Q8TDX9 2849 aa0.93□□□□□ -2.26
SMARCE1P4-201ENST00000523647 ARHGAP5-AS1Q96IT6 56 aa0.93□□□□□ -2.26
SMARCE1P4-201ENST00000523647 NOTCH1P46531 2555 aa0.92□□□□□ -2.26
SMARCE1P4-201ENST00000523647 UBR5O95071 2799 aaPredicted RBP0.92□□□□□ -2.26
SMARCE1P4-201ENST00000523647 HUWE1Q7Z6Z7 4374 aaKnown RBP0.92□□□□□ -2.26
SMARCE1P4-201ENST00000523647 UNC79Q9P2D8 2635 aa0.91□□□□□ -2.26
SMARCE1P4-201ENST00000523647 M0QZ58 72 aa0.91□□□□□ -2.26
SMARCE1P4-201ENST00000523647 C9orf92A6NGG3 77 aa0.9□□□□□ -2.27
SMARCE1P4-201ENST00000523647 PDZD2O15018 2839 aa0.9□□□□□ -2.27
SMARCE1P4-201ENST00000523647 KRTAP5-10Q6L8G5 202 aa0.88□□□□□ -2.27
SMARCE1P4-201ENST00000523647 SACSQ9NZJ4 4579 aa0.88□□□□□ -2.27
SMARCE1P4-201ENST00000523647 VPS13BQ7Z7G8 4022 aa0.87□□□□□ -2.27
SMARCE1P4-201ENST00000523647 LEAP2Q969E1 77 aa0.87□□□□□ -2.27
SMARCE1P4-201ENST00000523647 KRTAP21-1Q3LI58 79 aa0.86□□□□□ -2.27
SMARCE1P4-201ENST00000523647 KMT2AQ03164 3969 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms