RNA–Protein interactions for RNA: ENST00000523622.1

NPM1-211, Transcript of nucleophosmin 1, humanhuman

TSL 3

Gene NPM1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-211ENST00000523622 SPTA1P02549 2419 aa2.63□□□□□ -1.99
NPM1-211ENST00000523622 NOTCH3Q9UM47 2321 aa2.63□□□□□ -1.99
NPM1-211ENST00000523622 ABCA2Q9BZC7 2435 aa2.62□□□□□ -1.99
NPM1-211ENST00000523622 APELAP0DMC3 54 aa2.6□□□□□ -1.99
NPM1-211ENST00000523622 KRTAP9-3Q9BYQ3 159 aa2.6□□□□□ -1.99
NPM1-211ENST00000523622 NOP10Q9NPE3 64 aaKnown RBP2.6□□□□□ -1.99
NPM1-211ENST00000523622 MGAQ8IWI9 3026 aa2.6□□□□□ -1.99
NPM1-211ENST00000523622 LCE3CQ5T5A8 94 aa2.59□□□□□ -1.99
NPM1-211ENST00000523622 CELSR2Q9HCU4 2923 aa2.58□□□□□ -2
NPM1-211ENST00000523622 GVINP1Q7Z2Y8 2422 aa2.58□□□□□ -2
NPM1-211ENST00000523622 LCE1EQ5T753 118 aa2.58□□□□□ -2
NPM1-211ENST00000523622 ABCA12Q86UK0 2595 aa2.58□□□□□ -2
NPM1-211ENST00000523622 F8P00451 2351 aa2.58□□□□□ -2
NPM1-211ENST00000523622 FBN1P35555 2871 aaKnown RBP2.58□□□□□ -2
NPM1-211ENST00000523622 A0A0D9SG42 100 aa2.57□□□□□ -2
NPM1-211ENST00000523622 KRTAP10-10P60014 251 aa2.57□□□□□ -2
NPM1-211ENST00000523622 KRTAP6-3Q3LI67 103 aa2.56□□□□□ -2
NPM1-211ENST00000523622 DEFB119Q8N690 84 aa2.54□□□□□ -2
NPM1-211ENST00000523622 KRTAP1-5Q9BYS1 174 aa2.54□□□□□ -2
NPM1-211ENST00000523622 H0YGG7 62 aa2.53□□□□□ -2
NPM1-211ENST00000523622 CEP290O15078 2479 aa2.53□□□□□ -2
NPM1-211ENST00000523622 PRRC2CQ9Y520 2896 aaKnown RBP2.52□□□□□ -2.01
NPM1-211ENST00000523622 CACNA1HO95180 2353 aa2.52□□□□□ -2.01
NPM1-211ENST00000523622 TRANK1O15050 2925 aa2.52□□□□□ -2.01
NPM1-211ENST00000523622 ASH1LQ9NR48 2969 aaKnown RBP2.52□□□□□ -2.01
NPM1-211ENST00000523622 DEFB1P60022 68 aa2.51□□□□□ -2.01
NPM1-211ENST00000523622 KRTAP10-12P60413 245 aa2.51□□□□□ -2.01
NPM1-211ENST00000523622 SPTBN4Q9H254 2564 aa2.51□□□□□ -2.01
NPM1-211ENST00000523622 TENM2Q9NT68 2774 aa2.5□□□□□ -2.01
NPM1-211ENST00000523622 OTOGQ6ZRI0 2925 aa2.49□□□□□ -2.01
NPM1-211ENST00000523622 COX14Q96I36 57 aa2.49□□□□□ -2.01
NPM1-211ENST00000523622 KRTAP12-4P60329 112 aa2.48□□□□□ -2.01
NPM1-211ENST00000523622 PKD1L2Q7Z442 2459 aa2.47□□□□□ -2.01
NPM1-211ENST00000523622 UBR5O95071 2799 aaPredicted RBP2.47□□□□□ -2.01
NPM1-211ENST00000523622 ZNF292O60281 2723 aa2.46□□□□□ -2.02
NPM1-211ENST00000523622 EP300Q09472 2414 aaPredicted RBP2.45□□□□□ -2.02
NPM1-211ENST00000523622 KRTAP13-1Q8IUC0 172 aa2.45□□□□□ -2.02
NPM1-211ENST00000523622 SRRM2Q9UQ35 2752 aaKnown RBP2.44□□□□□ -2.02
NPM1-211ENST00000523622 TTC28Q96AY4 2481 aa2.43□□□□□ -2.02
NPM1-211ENST00000523622 KRTAP10-7P60409 375 aaPredicted RBP2.43□□□□□ -2.02
NPM1-211ENST00000523622 CCDC168Q8NDH2 2452 aa2.42□□□□□ -2.02
NPM1-211ENST00000523622 MEGF8Q7Z7M0 2845 aa2.42□□□□□ -2.02
NPM1-211ENST00000523622 RHPN1-AS1Q9BWJ2 59 aa2.41□□□□□ -2.02
NPM1-211ENST00000523622 CREBBPQ92793 2442 aa2.41□□□□□ -2.02
NPM1-211ENST00000523622 NAV2Q8IVL1 2488 aa2.4□□□□□ -2.03
NPM1-211ENST00000523622 COL6A5A8TX70 2615 aa2.39□□□□□ -2.03
NPM1-211ENST00000523622 RP1L1Q8IWN7 2480 aaPredicted RBP2.39□□□□□ -2.03
NPM1-211ENST00000523622 VPS13DQ5THJ4 4388 aa2.38□□□□□ -2.03
NPM1-211ENST00000523622 H3BUX3 64 aa2.38□□□□□ -2.03
NPM1-211ENST00000523622 LCE3EQ5T5B0 92 aa2.38□□□□□ -2.03
NPM1-211ENST00000523622 CEP250Q9BV73 2442 aa2.38□□□□□ -2.03
NPM1-211ENST00000523622 HTN1P15515 57 aa2.37□□□□□ -2.03
NPM1-211ENST00000523622 VWFP04275 2813 aa2.36□□□□□ -2.03
NPM1-211ENST00000523622 M0QZ58 72 aa2.36□□□□□ -2.03
NPM1-211ENST00000523622 NCOR1O75376 2440 aa2.35□□□□□ -2.03
NPM1-211ENST00000523622 DMBT1Q9UGM3 2413 aaPredicted RBP2.35□□□□□ -2.03
NPM1-211ENST00000523622 AKAP13Q12802 2813 aa2.35□□□□□ -2.03
NPM1-211ENST00000523622 CELSR1Q9NYQ6 3014 aa2.34□□□□□ -2.03
NPM1-211ENST00000523622 DNAH11Q96DT5 4516 aa2.34□□□□□ -2.04
NPM1-211ENST00000523622 SETD2Q9BYW2 2564 aaPredicted RBP2.33□□□□□ -2.04
NPM1-211ENST00000523622 POLQO75417 2590 aa2.32□□□□□ -2.04
NPM1-211ENST00000523622 HECTD1Q9ULT8 2610 aa2.32□□□□□ -2.04
NPM1-211ENST00000523622 TNRC18O15417 2968 aaPredicted RBP2.31□□□□□ -2.04
NPM1-211ENST00000523622 APC2O95996 2303 aa2.29□□□□□ -2.04
NPM1-211ENST00000523622 NBPF19A0A087WUL8 3843 aa2.29□□□□□ -2.04
NPM1-211ENST00000523622 DEFB136Q30KP8 78 aa2.29□□□□□ -2.04
NPM1-211ENST00000523622 DEFB108BQ8NET1 73 aa2.29□□□□□ -2.04
NPM1-211ENST00000523622 CRYBG3Q68DQ2 2970 aa2.28□□□□□ -2.04
NPM1-211ENST00000523622 COL6A3P12111 3177 aa2.28□□□□□ -2.04
NPM1-211ENST00000523622 DEFB110Q30KQ9 67 aa2.28□□□□□ -2.04
NPM1-211ENST00000523622 NBASA2RRP1 2371 aa2.28□□□□□ -2.05
NPM1-211ENST00000523622 WDR87Q6ZQQ6 2873 aa2.28□□□□□ -2.05
NPM1-211ENST00000523622 CHD6Q8TD26 2715 aa2.27□□□□□ -2.05
NPM1-211ENST00000523622 J3QKU1 62 aa2.26□□□□□ -2.05
NPM1-211ENST00000523622 MAP1BP46821 2468 aaKnown RBP2.26□□□□□ -2.05
NPM1-211ENST00000523622 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.25□□□□□ -2.05
NPM1-211ENST00000523622 KRTAP10-5P60370 271 aa2.24□□□□□ -2.05
NPM1-211ENST00000523622 ATRQ13535 2644 aa2.23□□□□□ -2.05
NPM1-211ENST00000523622 CHD9Q3L8U1 2897 aa2.23□□□□□ -2.05
NPM1-211ENST00000523622 LCE3DQ9BYE3 92 aa2.23□□□□□ -2.05
NPM1-211ENST00000523622 CSMD3Q7Z407 3707 aa2.22□□□□□ -2.05
NPM1-211ENST00000523622 A0A096LNI7 61 aa2.22□□□□□ -2.05
NPM1-211ENST00000523622 SPINK6Q6UWN8 80 aa2.22□□□□□ -2.05
NPM1-211ENST00000523622 RANBP2P49792 3224 aaKnown RBP2.18□□□□□ -2.06
NPM1-211ENST00000523622 PIEZO1Q92508 2521 aa2.18□□□□□ -2.06
NPM1-211ENST00000523622 KRTAP10-4P60372 401 aaPredicted RBP2.17□□□□□ -2.06
NPM1-211ENST00000523622 AKAP9Q99996 3911 aa2.17□□□□□ -2.06
NPM1-211ENST00000523622 ZFHX4Q86UP3 3567 aa2.16□□□□□ -2.06
NPM1-211ENST00000523622 MYCBP2O75592 4640 aa2.16□□□□□ -2.06
NPM1-211ENST00000523622 BSNQ9UPA5 3926 aa2.16□□□□□ -2.06
NPM1-211ENST00000523622 DEFB135Q30KP9 77 aa2.16□□□□□ -2.06
NPM1-211ENST00000523622 LYSTQ99698 3801 aa2.15□□□□□ -2.07
NPM1-211ENST00000523622 SACSQ9NZJ4 4579 aa2.13□□□□□ -2.07
NPM1-211ENST00000523622 TNP1P09430 55 aa2.12□□□□□ -2.07
NPM1-211ENST00000523622 KRTAP12-3P60328 96 aa2.12□□□□□ -2.07
NPM1-211ENST00000523622 BDP1A6H8Y1 2624 aa2.11□□□□□ -2.07
NPM1-211ENST00000523622 RIF1Q5UIP0 2472 aaKnown RBP2.11□□□□□ -2.07
NPM1-211ENST00000523622 FRYQ5TBA9 3013 aa2.1□□□□□ -2.07
NPM1-211ENST00000523622 PTPN13Q12923 2485 aa2.1□□□□□ -2.07
NPM1-211ENST00000523622 FAM186AA6NE01 2351 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 150.2 ms