RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 PRR4Q16378 134 aa5.37□□□□□ -1.55
CLK4-209ENST00000521621 SNCGO76070 127 aa5.36□□□□□ -1.55
CLK4-209ENST00000521621 SMIM6P0DI80 62 aa5.36□□□□□ -1.55
CLK4-209ENST00000521621 C9orf153Q5TBE3 101 aa5.36□□□□□ -1.55
CLK4-209ENST00000521621 TMA7Q9Y2S6 64 aaKnown RBP5.36□□□□□ -1.55
CLK4-209ENST00000521621 Q6JHZ5 121 aa5.36□□□□□ -1.55
CLK4-209ENST00000521621 MUC17Q685J3 4493 aa5.34□□□□□ -1.55
CLK4-209ENST00000521621 IGLV7-46A0A075B6I9 117 aa5.34□□□□□ -1.55
CLK4-209ENST00000521621 FXYD2P54710 66 aa5.34□□□□□ -1.55
CLK4-209ENST00000521621 ASB16-AS1Q495Z4 193 aa5.34□□□□□ -1.55
CLK4-209ENST00000521621 Q6ZQY7 126 aa5.33□□□□□ -1.56
CLK4-209ENST00000521621 C12orf57Q99622 126 aa5.33□□□□□ -1.56
CLK4-209ENST00000521621 KRTAP13-3Q3SY46 172 aa5.33□□□□□ -1.56
CLK4-209ENST00000521621 Q6Q795 121 aa5.33□□□□□ -1.56
CLK4-209ENST00000521621 H7C2G1 150 aa5.32□□□□□ -1.56
CLK4-209ENST00000521621 DEFB105AQ8NG35 78 aa5.32□□□□□ -1.56
CLK4-209ENST00000521621 F8WEM9 126 aa5.31□□□□□ -1.56
CLK4-209ENST00000521621 Q1RN00 199 aa5.29□□□□□ -1.56
CLK4-209ENST00000521621 CLEC2BQ92478 149 aa5.29□□□□□ -1.56
CLK4-209ENST00000521621 UBR4Q5T4S7 5183 aa5.29□□□□□ -1.56
CLK4-209ENST00000521621 TRIAP1O43715 76 aa5.29□□□□□ -1.56
CLK4-209ENST00000521621 RETNLBQ9BQ08 111 aa5.29□□□□□ -1.56
CLK4-209ENST00000521621 FAM218AQ96MZ4 157 aa5.28□□□□□ -1.56
CLK4-209ENST00000521621 M0R143 59 aa5.28□□□□□ -1.56
CLK4-209ENST00000521621 COX6CP09669 75 aa5.28□□□□□ -1.56
CLK4-209ENST00000521621 LOC105371267A0A1B0GV96 52 aa5.27□□□□□ -1.57
CLK4-209ENST00000521621 LRP2P98164 4655 aa5.27□□□□□ -1.57
CLK4-209ENST00000521621 XP32Q5T750 250 aa5.27□□□□□ -1.57
CLK4-209ENST00000521621 TCL1BO95988 128 aa5.27□□□□□ -1.57
CLK4-209ENST00000521621 TRACP01848 142 aa5.27□□□□□ -1.57
CLK4-209ENST00000521621 SNHG12Q9BXW3 62 aa5.27□□□□□ -1.57
CLK4-209ENST00000521621 LPAP08519 4548 aa5.27□□□□□ -1.57
CLK4-209ENST00000521621 TRBV7-7A0A0K0K1E9 115 aa5.26□□□□□ -1.57
CLK4-209ENST00000521621 IGFL1Q6UW32 110 aa5.26□□□□□ -1.57
CLK4-209ENST00000521621 NDUFV3P56181 108 aaKnown RBP5.25□□□□□ -1.57
CLK4-209ENST00000521621 C1orf195Q5TG92 126 aa5.24□□□□□ -1.57
CLK4-209ENST00000521621 CDIP1Q9H305 208 aa5.24□□□□□ -1.57
CLK4-209ENST00000521621 TMEM256-PLSCR3K7ERE1 68 aa5.24□□□□□ -1.57
CLK4-209ENST00000521621 UBE2V1Q13404 147 aa5.24□□□□□ -1.57
CLK4-209ENST00000521621 LST1O00453 97 aa5.23□□□□□ -1.57
CLK4-209ENST00000521621 ORMDL1Q9P0S3 153 aa5.23□□□□□ -1.57
CLK4-209ENST00000521621 TSTD3H0UI37 97 aa5.23□□□□□ -1.57
CLK4-209ENST00000521621 K7ERJ3 54 aa5.23□□□□□ -1.57
CLK4-209ENST00000521621 TEN1Q86WV5 123 aa5.23□□□□□ -1.57
CLK4-209ENST00000521621 PSMB2P49721 201 aa5.22□□□□□ -1.57
CLK4-209ENST00000521621 DNAL4O96015 105 aa5.21□□□□□ -1.57
CLK4-209ENST00000521621 SS18L2Q9UHA2 77 aa5.21□□□□□ -1.57
CLK4-209ENST00000521621 SEC61BP60468 96 aaKnown RBP5.21□□□□□ -1.58
CLK4-209ENST00000521621 C21orf62-AS1Q17RA5 79 aa5.21□□□□□ -1.58
CLK4-209ENST00000521621 HRCT1Q6UXD1 115 aa5.2□□□□□ -1.58
CLK4-209ENST00000521621 TRBV7-4A0A0J9YYF1 115 aa5.19□□□□□ -1.58
CLK4-209ENST00000521621 A0A0U1RQV1 116 aa5.19□□□□□ -1.58
CLK4-209ENST00000521621 RNF213Q63HN8 5207 aa5.19□□□□□ -1.58
CLK4-209ENST00000521621 SMCPP49901 116 aaPredicted RBP5.19□□□□□ -1.58
CLK4-209ENST00000521621 LYRM7Q5U5X0 104 aa5.18□□□□□ -1.58
CLK4-209ENST00000521621 H3BMG7 143 aa5.18□□□□□ -1.58
CLK4-209ENST00000521621 A0A1B0GW54 56 aa5.17□□□□□ -1.58
CLK4-209ENST00000521621 A0A0G2JQZ4 141 aa5.16□□□□□ -1.58
CLK4-209ENST00000521621 H3BUT2 72 aa5.16□□□□□ -1.58
CLK4-209ENST00000521621 FABP2P12104 132 aa5.16□□□□□ -1.58
CLK4-209ENST00000521621 ATXN8Q156A1 80 aa5.16□□□□□ -1.58
CLK4-209ENST00000521621 TRBV20-1A0A075B6N2 111 aa5.16□□□□□ -1.58
CLK4-209ENST00000521621 SCGB1C2P0DMR2 95 aa5.16□□□□□ -1.58
CLK4-209ENST00000521621 A0A1W2PNM2 257 aa5.15□□□□□ -1.58
CLK4-209ENST00000521621 ANKRD29Q8N6D5 301 aa5.15□□□□□ -1.59
CLK4-209ENST00000521621 Q96NJ1 140 aa5.14□□□□□ -1.59
CLK4-209ENST00000521621 RPL37P61927 97 aaKnown RBP5.13□□□□□ -1.59
CLK4-209ENST00000521621 JMJD7-PLA2G4BH0Y9G9 81 aa5.12□□□□□ -1.59
CLK4-209ENST00000521621 PDE6GP18545 87 aa5.12□□□□□ -1.59
CLK4-209ENST00000521621 LOC110117498A0A087WWA1 95 aa5.12□□□□□ -1.59
CLK4-209ENST00000521621 BAALC-AS2P0C853 105 aa5.12□□□□□ -1.59
CLK4-209ENST00000521621 RBM3P98179 157 aaKnown RBP5.12□□□□□ -1.59
CLK4-209ENST00000521621 OBSCN-AS1Q96MR7 158 aa5.12□□□□□ -1.59
CLK4-209ENST00000521621 C9orf118A6NHY6 69 aa5.11□□□□□ -1.59
CLK4-209ENST00000521621 Q75L30 129 aa5.1□□□□□ -1.59
CLK4-209ENST00000521621 A0A087WSZ3 146 aa5.1□□□□□ -1.59
CLK4-209ENST00000521621 DSCR8Q96T75 97 aa5.1□□□□□ -1.59
CLK4-209ENST00000521621 TAX1BP3O14907 124 aa5.09□□□□□ -1.59
CLK4-209ENST00000521621 LINC00472Q9H8W2 130 aa5.09□□□□□ -1.59
CLK4-209ENST00000521621 H3BT86 120 aa5.08□□□□□ -1.6
CLK4-209ENST00000521621 CCKP06307 115 aa5.08□□□□□ -1.6
CLK4-209ENST00000521621 C20orf166-AS1Q96NR2 134 aa5.08□□□□□ -1.6
CLK4-209ENST00000521621 A0A1W2PPM0 123 aa5.07□□□□□ -1.6
CLK4-209ENST00000521621 C9orf92A6NGG3 77 aa5.07□□□□□ -1.6
CLK4-209ENST00000521621 C9JAW5 83 aa5.07□□□□□ -1.6
CLK4-209ENST00000521621 LCE2AQ5TA79 106 aaPredicted RBP5.07□□□□□ -1.6
CLK4-209ENST00000521621 LCE2CQ5TA81 110 aa5.07□□□□□ -1.6
CLK4-209ENST00000521621 KRTAP4-1Q9BYQ7 146 aa5.07□□□□□ -1.6
CLK4-209ENST00000521621 A8MUU9 505 aa5.06□□□□□ -1.6
CLK4-209ENST00000521621 J3KT08 172 aa5.06□□□□□ -1.6
CLK4-209ENST00000521621 Q6ZQT0 140 aa5.06□□□□□ -1.6
CLK4-209ENST00000521621 C8orf87E5RJ46 101 aa5.04□□□□□ -1.6
CLK4-209ENST00000521621 PCOTHQ58A44 107 aa5.04□□□□□ -1.6
CLK4-209ENST00000521621 COL5A1-AS1Q5SY13 56 aa5.03□□□□□ -1.6
CLK4-209ENST00000521621 BATFQ16520 125 aa5.02□□□□□ -1.61
CLK4-209ENST00000521621 NAA38Q9BRA0 125 aaKnown RBP5.02□□□□□ -1.61
CLK4-209ENST00000521621 KRTAP16-1A8MUX0 517 aa5.02□□□□□ -1.61
CLK4-209ENST00000521621 IGKV4-1P06312 121 aa5.01□□□□□ -1.61
CLK4-209ENST00000521621 KRTAP19-2Q3LHN2 52 aa5.01□□□□□ -1.61
CLK4-209ENST00000521621 LINC00313P59037 77 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms