RNA–Protein interactions for RNA: ENST00000521434.5

MRPS28-207, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5 BASIC

Gene MRPS28, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-207ENST00000521434 KRTAP19-2Q3LHN2 52 aa4.97□□□□□ -1.61
MRPS28-207ENST00000521434 NKAPP1Q8N9T2 125 aa4.97□□□□□ -1.61
MRPS28-207ENST00000521434 AMELXQ99217 191 aa4.97□□□□□ -1.61
MRPS28-207ENST00000521434 TRBV10-2A0A0K0K1G8 114 aa4.96□□□□□ -1.62
MRPS28-207ENST00000521434 FAM240AA0A1B0GVK7 77 aa4.96□□□□□ -1.62
MRPS28-207ENST00000521434 TMEM223A0PJW6 202 aa4.96□□□□□ -1.62
MRPS28-207ENST00000521434 IFITM1P13164 125 aa4.96□□□□□ -1.62
MRPS28-207ENST00000521434 NDUFV3P56181 108 aaKnown RBP4.96□□□□□ -1.62
MRPS28-207ENST00000521434 IGKV2-28A0A075B6P5 120 aa4.95□□□□□ -1.62
MRPS28-207ENST00000521434 A4D1N5 150 aa4.95□□□□□ -1.62
MRPS28-207ENST00000521434 C9JAW5 83 aa4.95□□□□□ -1.62
MRPS28-207ENST00000521434 H3BT86 120 aa4.95□□□□□ -1.62
MRPS28-207ENST00000521434 IGKV2D-28P01615 120 aa4.95□□□□□ -1.62
MRPS28-207ENST00000521434 CXCL5P42830 114 aa4.95□□□□□ -1.62
MRPS28-207ENST00000521434 KRTAP10-6P60371 365 aaPredicted RBP4.95□□□□□ -1.62
MRPS28-207ENST00000521434 TMEM170BQ5T4T1 132 aa4.95□□□□□ -1.62
MRPS28-207ENST00000521434 FAM19A1Q7Z5A9 133 aa4.95□□□□□ -1.62
MRPS28-207ENST00000521434 DAND5Q8N907 189 aa4.95□□□□□ -1.62
MRPS28-207ENST00000521434 COX6CP09669 75 aa4.94□□□□□ -1.62
MRPS28-207ENST00000521434 MUSTN1Q8IVN3 82 aa4.94□□□□□ -1.62
MRPS28-207ENST00000521434 NDUFA12Q9UI09 145 aa4.94□□□□□ -1.62
MRPS28-207ENST00000521434 SPINK1P00995 79 aa4.93□□□□□ -1.62
MRPS28-207ENST00000521434 ACYP1P07311 99 aa4.93□□□□□ -1.62
MRPS28-207ENST00000521434 TSPEAR-AS2P59090 65 aa4.93□□□□□ -1.62
MRPS28-207ENST00000521434 FAM19A3Q7Z5A8 133 aa4.93□□□□□ -1.62
MRPS28-207ENST00000521434 Q8NBF4 154 aa4.93□□□□□ -1.62
MRPS28-207ENST00000521434 IMUPQ9GZP8 106 aa4.93□□□□□ -1.62
MRPS28-207ENST00000521434 TMEM126AQ9H061 195 aa4.93□□□□□ -1.62
MRPS28-207ENST00000521434 SPANXCQ9NY87 97 aa4.93□□□□□ -1.62
MRPS28-207ENST00000521434 CDKN2A-AS1Q9UH64 79 aa4.93□□□□□ -1.62
MRPS28-207ENST00000521434 A0A0J9YXY3 114 aa4.92□□□□□ -1.62
MRPS28-207ENST00000521434 TIMM17BO60830 172 aa4.92□□□□□ -1.62
MRPS28-207ENST00000521434 HERVK_113P63121 156 aa4.92□□□□□ -1.62
MRPS28-207ENST00000521434 TRBV7-7A0A0K0K1E9 115 aa4.91□□□□□ -1.62
MRPS28-207ENST00000521434 M0R378 163 aa4.91□□□□□ -1.62
MRPS28-207ENST00000521434 ZNF22P17026 224 aaPredicted RBP4.91□□□□□ -1.62
MRPS28-207ENST00000521434 Q1RN00 199 aa4.91□□□□□ -1.62
MRPS28-207ENST00000521434 SFTA2Q6UW10 78 aa4.91□□□□□ -1.62
MRPS28-207ENST00000521434 SPRR4Q96PI1 79 aa4.91□□□□□ -1.62
MRPS28-207ENST00000521434 HIGD2AQ9BW72 106 aa4.91□□□□□ -1.62
MRPS28-207ENST00000521434 SS18L2Q9UHA2 77 aa4.91□□□□□ -1.62
MRPS28-207ENST00000521434 COPS9Q8WXC6 57 aa4.9□□□□□ -1.63
MRPS28-207ENST00000521434 TINCRA0A1B0GVN0 87 aa4.89□□□□□ -1.63
MRPS28-207ENST00000521434 LST1O00453 97 aa4.89□□□□□ -1.63
MRPS28-207ENST00000521434 COX7B2Q8TF08 81 aa4.89□□□□□ -1.63
MRPS28-207ENST00000521434 LITAFQ99732 161 aa4.89□□□□□ -1.63
MRPS28-207ENST00000521434 ZNF706Q9Y5V0 76 aaPredicted RBP4.89□□□□□ -1.63
MRPS28-207ENST00000521434 TEX49A0A1B0GTD5 131 aa4.88□□□□□ -1.63
MRPS28-207ENST00000521434 SMIM1B2RUZ4 78 aa4.88□□□□□ -1.63
MRPS28-207ENST00000521434 CCDC179H3BU77 68 aa4.88□□□□□ -1.63
MRPS28-207ENST00000521434 M0R2T5 61 aa4.88□□□□□ -1.63
MRPS28-207ENST00000521434 TRIAP1O43715 76 aa4.88□□□□□ -1.63
MRPS28-207ENST00000521434 VPREB1P12018 145 aa4.88□□□□□ -1.63
MRPS28-207ENST00000521434 Q8N377 158 aa4.88□□□□□ -1.63
MRPS28-207ENST00000521434 RPS29P62273 56 aaKnown RBP4.87□□□□□ -1.63
MRPS28-207ENST00000521434 IGLV8-61A0A075B6I0 122 aa4.86□□□□□ -1.63
MRPS28-207ENST00000521434 H7C2G1 150 aa4.86□□□□□ -1.63
MRPS28-207ENST00000521434 PCOTHQ58A44 107 aa4.86□□□□□ -1.63
MRPS28-207ENST00000521434 MEIG1Q5JSS6 88 aa4.86□□□□□ -1.63
MRPS28-207ENST00000521434 IGLV5-45A0A087WSX0 123 aa4.85□□□□□ -1.63
MRPS28-207ENST00000521434 PFN2P35080 140 aa4.85□□□□□ -1.63
MRPS28-207ENST00000521434 KRTAP15-1Q3LI76 137 aa4.85□□□□□ -1.63
MRPS28-207ENST00000521434 LINC00643Q86TS7 51 aa4.85□□□□□ -1.63
MRPS28-207ENST00000521434 TRACP01848 142 aa4.84□□□□□ -1.63
MRPS28-207ENST00000521434 ADAMTSL4-AS1Q5T5F5 129 aa4.84□□□□□ -1.63
MRPS28-207ENST00000521434 SND1-IT1Q9HBX3 110 aa4.84□□□□□ -1.63
MRPS28-207ENST00000521434 FLGP20930 4061 aaPredicted RBP4.83□□□□□ -1.64
MRPS28-207ENST00000521434 UQCRQO14949 82 aa4.83□□□□□ -1.64
MRPS28-207ENST00000521434 HERV-K104P63124 156 aa4.83□□□□□ -1.64
MRPS28-207ENST00000521434 SMIM20Q8N5G0 67 aa4.83□□□□□ -1.64
MRPS28-207ENST00000521434 MOBPQ13875 183 aa4.82□□□□□ -1.64
MRPS28-207ENST00000521434 LINC00483Q53H64 154 aa4.82□□□□□ -1.64
MRPS28-207ENST00000521434 SSBP3-AS1Q7Z2R9 100 aa4.82□□□□□ -1.64
MRPS28-207ENST00000521434 Q8NDZ9 215 aa4.82□□□□□ -1.64
MRPS28-207ENST00000521434 IGLV9-49A0A0B4J1Y8 123 aa4.81□□□□□ -1.64
MRPS28-207ENST00000521434 IGLV5-39A0A0G2JS06 123 aa4.81□□□□□ -1.64
MRPS28-207ENST00000521434 A0A1B0GX51 115 aa4.81□□□□□ -1.64
MRPS28-207ENST00000521434 RPS28P62857 69 aaKnown RBP4.81□□□□□ -1.64
MRPS28-207ENST00000521434 COX17Q14061 63 aa4.81□□□□□ -1.64
MRPS28-207ENST00000521434 LINC00308Q8TCZ7 52 aa4.81□□□□□ -1.64
MRPS28-207ENST00000521434 SMCR5Q8TEV8 140 aa4.81□□□□□ -1.64
MRPS28-207ENST00000521434 COX6B2Q6YFQ2 88 aa4.8□□□□□ -1.64
MRPS28-207ENST00000521434 CLEC2BQ92478 149 aa4.8□□□□□ -1.64
MRPS28-207ENST00000521434 ATOX1O00244 68 aa4.79□□□□□ -1.64
MRPS28-207ENST00000521434 BAALC-AS2P0C853 105 aa4.79□□□□□ -1.64
MRPS28-207ENST00000521434 GAGE2AQ6NT46 116 aa4.79□□□□□ -1.64
MRPS28-207ENST00000521434 SSPOA2VEC9 5147 aa4.79□□□□□ -1.64
MRPS28-207ENST00000521434 TRAV13-2A0A0B4J235 113 aa4.78□□□□□ -1.64
MRPS28-207ENST00000521434 FAM236AA0A1B0GUQ0 79 aa4.78□□□□□ -1.64
MRPS28-207ENST00000521434 FAM236BA0A1B0GV22 79 aa4.78□□□□□ -1.64
MRPS28-207ENST00000521434 PRYO14603 147 aa4.78□□□□□ -1.64
MRPS28-207ENST00000521434 COX7CP15954 63 aa4.78□□□□□ -1.64
MRPS28-207ENST00000521434 HIST1H4AP62805 103 aaKnown RBP4.78□□□□□ -1.64
MRPS28-207ENST00000521434 C9orf153Q5TBE3 101 aa4.78□□□□□ -1.64
MRPS28-207ENST00000521434 H0YGX0 51 aa4.77□□□□□ -1.65
MRPS28-207ENST00000521434 SPRR1AP35321 89 aa4.77□□□□□ -1.65
MRPS28-207ENST00000521434 ZNF625Q96I27 306 aaPredicted RBP4.77□□□□□ -1.65
MRPS28-207ENST00000521434 USH2AO75445 5202 aa4.77□□□□□ -1.65
MRPS28-207ENST00000521434 FCGBPQ9Y6R7 5405 aaPredicted RBP4.76□□□□□ -1.65
MRPS28-207ENST00000521434 ETDCA0A1B0GVM5 59 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms