RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 A0A1B0GX51 115 aa1.31□□□□□ -2.2
HMGN1P28-201ENST00000521340 ATOX1O00244 68 aa1.31□□□□□ -2.2
HMGN1P28-201ENST00000521340 DNAL4O96015 105 aa1.31□□□□□ -2.2
HMGN1P28-201ENST00000521340 IGLV1-51P01701 117 aa1.31□□□□□ -2.2
HMGN1P28-201ENST00000521340 BAALC-AS2P0C853 105 aa1.31□□□□□ -2.2
HMGN1P28-201ENST00000521340 CRYGAP11844 174 aa1.31□□□□□ -2.2
HMGN1P28-201ENST00000521340 COX7CP15954 63 aa1.31□□□□□ -2.2
HMGN1P28-201ENST00000521340 DEFB113Q30KQ7 82 aa1.31□□□□□ -2.2
HMGN1P28-201ENST00000521340 C9orf153Q5TBE3 101 aa1.31□□□□□ -2.2
HMGN1P28-201ENST00000521340 Q8IZM0 81 aa1.31□□□□□ -2.2
HMGN1P28-201ENST00000521340 SMIM20Q8N5G0 67 aa1.31□□□□□ -2.2
HMGN1P28-201ENST00000521340 SMIM11BQ8TCY0 68 aa1.31□□□□□ -2.2
HMGN1P28-201ENST00000521340 TMEM126AQ9H061 195 aa1.31□□□□□ -2.2
HMGN1P28-201ENST00000521340 CYSTM1Q9H1C7 97 aa1.31□□□□□ -2.2
HMGN1P28-201ENST00000521340 WFDC10AQ9H1F0 79 aa1.31□□□□□ -2.2
HMGN1P28-201ENST00000521340 C14orf132Q9NPU4 83 aa1.31□□□□□ -2.2
HMGN1P28-201ENST00000521340 UTP20O75691 2785 aaKnown RBP1.31□□□□□ -2.2
HMGN1P28-201ENST00000521340 TEX15Q9BXT5 2789 aa1.31□□□□□ -2.2
HMGN1P28-201ENST00000521340 FBN2P35556 2912 aa1.3□□□□□ -2.2
HMGN1P28-201ENST00000521340 CELSR2Q9HCU4 2923 aa1.3□□□□□ -2.2
HMGN1P28-201ENST00000521340 ANK3Q12955 4377 aaKnown RBP1.3□□□□□ -2.2
HMGN1P28-201ENST00000521340 SVEP1Q4LDE5 3571 aa1.3□□□□□ -2.2
HMGN1P28-201ENST00000521340 LINC00959A0A1B0GUT2 108 aa1.3□□□□□ -2.2
HMGN1P28-201ENST00000521340 H0YGX0 51 aa1.3□□□□□ -2.2
HMGN1P28-201ENST00000521340 J3KT08 172 aa1.3□□□□□ -2.2
HMGN1P28-201ENST00000521340 NDUFC2O95298 119 aa1.3□□□□□ -2.2
HMGN1P28-201ENST00000521340 TMEM258P61165 79 aa1.3□□□□□ -2.2
HMGN1P28-201ENST00000521340 KTN1-AS1Q86SY8 53 aa1.3□□□□□ -2.2
HMGN1P28-201ENST00000521340 C3orf56Q8N813 242 aa1.3□□□□□ -2.2
HMGN1P28-201ENST00000521340 NOP10Q9NPE3 64 aaKnown RBP1.3□□□□□ -2.2
HMGN1P28-201ENST00000521340 LINC00846Q9NV44 126 aa1.3□□□□□ -2.2
HMGN1P28-201ENST00000521340 ORMDL1Q9P0S3 153 aa1.3□□□□□ -2.2
HMGN1P28-201ENST00000521340 MXRA5Q9NR99 2828 aa1.3□□□□□ -2.2
HMGN1P28-201ENST00000521340 ASH1LQ9NR48 2969 aaKnown RBP1.3□□□□□ -2.2
HMGN1P28-201ENST00000521340 NSD1Q96L73 2696 aaPredicted RBP1.3□□□□□ -2.2
HMGN1P28-201ENST00000521340 APCP25054 2843 aa1.29□□□□□ -2.2
HMGN1P28-201ENST00000521340 TRGV2A0A075B6R0 118 aa1.29□□□□□ -2.2
HMGN1P28-201ENST00000521340 A0A087WVE0 104 aa1.29□□□□□ -2.2
HMGN1P28-201ENST00000521340 LOC110117498A0A087WWA1 95 aa1.29□□□□□ -2.2
HMGN1P28-201ENST00000521340 NCR3O14931 201 aa1.29□□□□□ -2.2
HMGN1P28-201ENST00000521340 CCKP06307 115 aa1.29□□□□□ -2.2
HMGN1P28-201ENST00000521340 LINC00158P58513 81 aa1.29□□□□□ -2.2
HMGN1P28-201ENST00000521340 COX17Q14061 63 aa1.29□□□□□ -2.2
HMGN1P28-201ENST00000521340 LYPD5Q6UWN5 251 aa1.29□□□□□ -2.2
HMGN1P28-201ENST00000521340 SERP2Q8N6R1 65 aa1.29□□□□□ -2.2
HMGN1P28-201ENST00000521340 TOMM7Q9P0U1 55 aa1.29□□□□□ -2.2
HMGN1P28-201ENST00000521340 CSMD2Q7Z408 3487 aa1.29□□□□□ -2.2
HMGN1P28-201ENST00000521340 HELZ2Q9BYK8 2649 aaKnown RBP1.29□□□□□ -2.2
HMGN1P28-201ENST00000521340 HIVEP1P15822 2718 aa1.29□□□□□ -2.2
HMGN1P28-201ENST00000521340 ZNF469Q96JG9 3925 aaPredicted RBP1.29□□□□□ -2.2
HMGN1P28-201ENST00000521340 MAP1AP78559 2803 aaPredicted RBP1.29□□□□□ -2.2
HMGN1P28-201ENST00000521340 CENPEQ02224 2701 aa1.28□□□□□ -2.2
HMGN1P28-201ENST00000521340 GVQW2A0A096LPI5 108 aaPredicted RBP1.28□□□□□ -2.2
HMGN1P28-201ENST00000521340 IGKV3D-7A0A0C4DH55 119 aa1.28□□□□□ -2.2
HMGN1P28-201ENST00000521340 IGKV3OR2-268A0A0C4DH90 116 aa1.28□□□□□ -2.2
HMGN1P28-201ENST00000521340 TRBV10-3A0A0K0K1G6 114 aa1.28□□□□□ -2.2
HMGN1P28-201ENST00000521340 hADV29S1A0JD25 119 aa1.28□□□□□ -2.2
HMGN1P28-201ENST00000521340 JMJD7-PLA2G4BH0Y9G9 81 aa1.28□□□□□ -2.2
HMGN1P28-201ENST00000521340 PRB1P04280 392 aa1.28□□□□□ -2.2
HMGN1P28-201ENST00000521340 S100A7L2Q5SY68 101 aa1.28□□□□□ -2.2
HMGN1P28-201ENST00000521340 CLPSL2Q6UWE3 100 aa1.28□□□□□ -2.2
HMGN1P28-201ENST00000521340 Q6ZQT0 140 aa1.28□□□□□ -2.2
HMGN1P28-201ENST00000521340 Q8N814 137 aa1.28□□□□□ -2.2
HMGN1P28-201ENST00000521340 WFDC11Q8NEX6 87 aa1.28□□□□□ -2.2
HMGN1P28-201ENST00000521340 FASNP49327 2511 aaKnown RBP1.28□□□□□ -2.2
HMGN1P28-201ENST00000521340 COL12A1Q99715 3063 aa1.27□□□□□ -2.21
HMGN1P28-201ENST00000521340 PDZD2O15018 2839 aa1.27□□□□□ -2.21
HMGN1P28-201ENST00000521340 TENM3Q9P273 2699 aa1.27□□□□□ -2.21
HMGN1P28-201ENST00000521340 TRBV7-6A0A0J9YX20 115 aa1.27□□□□□ -2.21
HMGN1P28-201ENST00000521340 TRBV7-4A0A0J9YYF1 115 aa1.27□□□□□ -2.21
HMGN1P28-201ENST00000521340 LOC107984640A0A0U1RRK4 108 aa1.27□□□□□ -2.21
HMGN1P28-201ENST00000521340 TMEM256-PLSCR3K7ERE1 68 aa1.27□□□□□ -2.21
HMGN1P28-201ENST00000521340 M0R2N4 97 aa1.27□□□□□ -2.21
HMGN1P28-201ENST00000521340 BCE1O60756 84 aa1.27□□□□□ -2.21
HMGN1P28-201ENST00000521340 RPS28P62857 69 aaKnown RBP1.27□□□□□ -2.21
HMGN1P28-201ENST00000521340 SPAG11BQ08648 103 aa1.27□□□□□ -2.21
HMGN1P28-201ENST00000521340 KLKP1Q107X0 134 aa1.27□□□□□ -2.21
HMGN1P28-201ENST00000521340 LINC01554Q52M75 96 aa1.27□□□□□ -2.21
HMGN1P28-201ENST00000521340 Q5XG85 94 aa1.27□□□□□ -2.21
HMGN1P28-201ENST00000521340 LINC00575Q6W349 94 aa1.27□□□□□ -2.21
HMGN1P28-201ENST00000521340 OR13C6PQ8NH95 151 aa1.27□□□□□ -2.21
HMGN1P28-201ENST00000521340 PRO0255Q9UI72 69 aa1.27□□□□□ -2.21
HMGN1P28-201ENST00000521340 CRYBG3Q68DQ2 2970 aa1.26□□□□□ -2.21
HMGN1P28-201ENST00000521340 TRAV23DV6A0A075B6W5 121 aa1.26□□□□□ -2.21
HMGN1P28-201ENST00000521340 H7BZZ5 65 aa1.26□□□□□ -2.21
HMGN1P28-201ENST00000521340 DEFB130BP0DP73 79 aa1.26□□□□□ -2.21
HMGN1P28-201ENST00000521340 DEFB130AP0DP74 79 aa1.26□□□□□ -2.21
HMGN1P28-201ENST00000521340 PDE6GP18545 87 aa1.26□□□□□ -2.21
HMGN1P28-201ENST00000521340 ELOF1P60002 83 aaKnown RBP1.26□□□□□ -2.21
HMGN1P28-201ENST00000521340 DEFB135Q30KP9 77 aa1.26□□□□□ -2.21
HMGN1P28-201ENST00000521340 C9orf116Q5BN46 136 aaPredicted RBP1.26□□□□□ -2.21
HMGN1P28-201ENST00000521340 LELP1Q5T871 98 aa1.26□□□□□ -2.21
HMGN1P28-201ENST00000521340 KRTAP26-1Q6PEX3 210 aa1.26□□□□□ -2.21
HMGN1P28-201ENST00000521340 ENHOQ6UWT2 76 aa1.26□□□□□ -2.21
HMGN1P28-201ENST00000521340 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.26□□□□□ -2.21
HMGN1P28-201ENST00000521340 Q6ZQY7 126 aa1.26□□□□□ -2.21
HMGN1P28-201ENST00000521340 LINC00269Q8N2A0 174 aa1.26□□□□□ -2.21
HMGN1P28-201ENST00000521340 WFDC9Q8NEX5 89 aa1.26□□□□□ -2.21
HMGN1P28-201ENST00000521340 DIRC1Q969H9 104 aa1.26□□□□□ -2.21
HMGN1P28-201ENST00000521340 DPH3Q96FX2 82 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms