RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 KLK9Q2XQG4 91 aa5.62□□□□□ -1.51
CSMD1-206ENST00000520002 TRIOO75962 3097 aa5.62□□□□□ -1.51
CSMD1-206ENST00000520002 PRR34Q9NV39 138 aa5.61□□□□□ -1.51
CSMD1-206ENST00000520002 ZNF861PO60384 105 aa5.61□□□□□ -1.51
CSMD1-206ENST00000520002 GIG44P09565 113 aaPredicted RBP5.61□□□□□ -1.51
CSMD1-206ENST00000520002 K7EIL1 84 aa5.6□□□□□ -1.51
CSMD1-206ENST00000520002 WWC2-AS2Q96NR7 200 aa5.6□□□□□ -1.51
CSMD1-206ENST00000520002 FRYQ5TBA9 3013 aa5.58□□□□□ -1.52
CSMD1-206ENST00000520002 LINC01558Q9Y6Z2 57 aa5.58□□□□□ -1.52
CSMD1-206ENST00000520002 A0A0A0MQY5 61 aa5.58□□□□□ -1.52
CSMD1-206ENST00000520002 SMR3BP02814 79 aaPredicted RBP5.58□□□□□ -1.52
CSMD1-206ENST00000520002 LRBAP50851 2863 aa5.57□□□□□ -1.52
CSMD1-206ENST00000520002 A0A1B0GU33 70 aa5.57□□□□□ -1.52
CSMD1-206ENST00000520002 IGLV7-46A0A075B6I9 117 aa5.56□□□□□ -1.52
CSMD1-206ENST00000520002 HIVEP1P15822 2718 aa5.56□□□□□ -1.52
CSMD1-206ENST00000520002 A0A087WTM6 91 aa5.55□□□□□ -1.52
CSMD1-206ENST00000520002 FRYLO94915 3013 aa5.55□□□□□ -1.52
CSMD1-206ENST00000520002 CASC10Q5T4H9 136 aa5.55□□□□□ -1.52
CSMD1-206ENST00000520002 VPS13AQ96RL7 3174 aa5.55□□□□□ -1.52
CSMD1-206ENST00000520002 ZNF575Q86XF7 245 aa5.55□□□□□ -1.52
CSMD1-206ENST00000520002 HRES1P13985 223 aa5.54□□□□□ -1.52
CSMD1-206ENST00000520002 PSORS1C2Q9UIG4 136 aa5.54□□□□□ -1.52
CSMD1-206ENST00000520002 DMAC1Q96GE9 116 aa5.54□□□□□ -1.52
CSMD1-206ENST00000520002 CHD9Q3L8U1 2897 aa5.54□□□□□ -1.52
CSMD1-206ENST00000520002 SPRR4Q96PI1 79 aa5.54□□□□□ -1.52
CSMD1-206ENST00000520002 PLA2G2DQ9UNK4 145 aa5.54□□□□□ -1.52
CSMD1-206ENST00000520002 TLX1NBP0CAT3 122 aa5.54□□□□□ -1.52
CSMD1-206ENST00000520002 IGLV5-37A0A075B6J1 123 aa5.53□□□□□ -1.52
CSMD1-206ENST00000520002 A0A096LNT2 108 aa5.53□□□□□ -1.52
CSMD1-206ENST00000520002 CNBPP62633 177 aaKnown RBP5.53□□□□□ -1.52
CSMD1-206ENST00000520002 LINC00612Q8N6U2 182 aa5.53□□□□□ -1.52
CSMD1-206ENST00000520002 C19orf73Q9NVV2 129 aa5.53□□□□□ -1.52
CSMD1-206ENST00000520002 IGLV7-43P04211 117 aa5.53□□□□□ -1.52
CSMD1-206ENST00000520002 KRTAP10-3P60369 221 aa5.52□□□□□ -1.53
CSMD1-206ENST00000520002 RANBP2P49792 3224 aaKnown RBP5.52□□□□□ -1.53
CSMD1-206ENST00000520002 ASH1LQ9NR48 2969 aaKnown RBP5.51□□□□□ -1.53
CSMD1-206ENST00000520002 KALRNO60229 2985 aa5.5□□□□□ -1.53
CSMD1-206ENST00000520002 WDFY4Q6ZS81 3184 aa5.49□□□□□ -1.53
CSMD1-206ENST00000520002 PRUNE2Q8WUY3 3088 aa5.48□□□□□ -1.53
CSMD1-206ENST00000520002 KRTAP16-1A8MUX0 517 aa5.47□□□□□ -1.53
CSMD1-206ENST00000520002 NBEAQ8NFP9 2946 aa5.47□□□□□ -1.53
CSMD1-206ENST00000520002 CELSR2Q9HCU4 2923 aa5.45□□□□□ -1.54
CSMD1-206ENST00000520002 TACC2O95359 2948 aa5.45□□□□□ -1.54
CSMD1-206ENST00000520002 LINC00483Q53H64 154 aa5.44□□□□□ -1.54
CSMD1-206ENST00000520002 NF1P21359 2839 aa5.44□□□□□ -1.54
CSMD1-206ENST00000520002 MMP24-AS1A0A0U1RRL7 71 aa5.43□□□□□ -1.54
CSMD1-206ENST00000520002 DMXL2Q8TDJ6 3036 aa5.42□□□□□ -1.54
CSMD1-206ENST00000520002 A6NN06 94 aa5.41□□□□□ -1.54
CSMD1-206ENST00000520002 FREM2Q5SZK8 3169 aa5.41□□□□□ -1.54
CSMD1-206ENST00000520002 Q8NDZ9 215 aa5.41□□□□□ -1.54
CSMD1-206ENST00000520002 ADM2Q7Z4H4 148 aa5.4□□□□□ -1.55
CSMD1-206ENST00000520002 TENM1Q9UKZ4 2725 aa5.4□□□□□ -1.55
CSMD1-206ENST00000520002 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.39□□□□□ -1.55
CSMD1-206ENST00000520002 ROMO1P60602 79 aa5.39□□□□□ -1.55
CSMD1-206ENST00000520002 A8MU10 97 aa5.38□□□□□ -1.55
CSMD1-206ENST00000520002 Q5W150 140 aa5.38□□□□□ -1.55
CSMD1-206ENST00000520002 NIPBLQ6KC79 2804 aaeCLIP5.38□□□□□ -1.55
CSMD1-206ENST00000520002 CRYBG3Q68DQ2 2970 aa5.37□□□□□ -1.55
CSMD1-206ENST00000520002 KRTAP1-3Q8IUG1 177 aa5.37□□□□□ -1.55
CSMD1-206ENST00000520002 Q6ZSA8 131 aa5.37□□□□□ -1.55
CSMD1-206ENST00000520002 CAMK2N1Q7Z7J9 78 aa5.36□□□□□ -1.55
CSMD1-206ENST00000520002 TENM3Q9P273 2699 aa5.36□□□□□ -1.55
CSMD1-206ENST00000520002 ZZEF1O43149 2961 aa5.36□□□□□ -1.55
CSMD1-206ENST00000520002 ZANQ9Y493 2812 aa5.36□□□□□ -1.55
CSMD1-206ENST00000520002 NDUFAF8A1L188 74 aa5.36□□□□□ -1.55
CSMD1-206ENST00000520002 MKI67P46013 3256 aaKnown RBP5.35□□□□□ -1.55
CSMD1-206ENST00000520002 KRTAP1-1Q07627 177 aa5.35□□□□□ -1.55
CSMD1-206ENST00000520002 TNP2Q05952 138 aa5.35□□□□□ -1.55
CSMD1-206ENST00000520002 HTTP42858 3142 aa5.33□□□□□ -1.56
CSMD1-206ENST00000520002 XIRP2A4UGR9 3374 aa5.33□□□□□ -1.56
CSMD1-206ENST00000520002 BRCA2P51587 3418 aa5.33□□□□□ -1.56
CSMD1-206ENST00000520002 LAMA3Q16787 3333 aa5.32□□□□□ -1.56
CSMD1-206ENST00000520002 M0R2T5 61 aa5.32□□□□□ -1.56
CSMD1-206ENST00000520002 SPATA8Q6RVD6 105 aa5.31□□□□□ -1.56
CSMD1-206ENST00000520002 S4R3F8 94 aa5.3□□□□□ -1.56
CSMD1-206ENST00000520002 COL12A1Q99715 3063 aa5.3□□□□□ -1.56
CSMD1-206ENST00000520002 H1FX-AS1Q4G0G2 97 aa5.3□□□□□ -1.56
CSMD1-206ENST00000520002 ZCCHC13Q8WW36 166 aaKnown RBP5.3□□□□□ -1.56
CSMD1-206ENST00000520002 LAMA1P25391 3075 aa5.3□□□□□ -1.56
CSMD1-206ENST00000520002 TNRC18O15417 2968 aaPredicted RBP5.29□□□□□ -1.56
CSMD1-206ENST00000520002 KRTAP25-1Q3LHN0 102 aa5.29□□□□□ -1.56
CSMD1-206ENST00000520002 ASB16-AS1Q495Z4 193 aa5.29□□□□□ -1.56
CSMD1-206ENST00000520002 DCHS2Q6V1P9 2916 aa5.28□□□□□ -1.56
CSMD1-206ENST00000520002 LINC00472Q9H8W2 130 aa5.27□□□□□ -1.57
CSMD1-206ENST00000520002 RPL37P61927 97 aaKnown RBP5.27□□□□□ -1.57
CSMD1-206ENST00000520002 REV3LO60673 3130 aa5.25□□□□□ -1.57
CSMD1-206ENST00000520002 TENM4Q6N022 2769 aa5.23□□□□□ -1.57
CSMD1-206ENST00000520002 PLAC8Q9NZF1 115 aa5.22□□□□□ -1.57
CSMD1-206ENST00000520002 Q6ZR54 194 aa5.22□□□□□ -1.57
CSMD1-206ENST00000520002 FBN2P35556 2912 aa5.22□□□□□ -1.57
CSMD1-206ENST00000520002 CELSR3Q9NYQ7 3312 aa5.21□□□□□ -1.57
CSMD1-206ENST00000520002 KRTAP26-1Q6PEX3 210 aa5.21□□□□□ -1.58
CSMD1-206ENST00000520002 SPRR1AP35321 89 aa5.2□□□□□ -1.58
CSMD1-206ENST00000520002 PDZD2O15018 2839 aa5.2□□□□□ -1.58
CSMD1-206ENST00000520002 BOD1L1Q8NFC6 3051 aa5.2□□□□□ -1.58
CSMD1-206ENST00000520002 R4GN34 69 aa5.19□□□□□ -1.58
CSMD1-206ENST00000520002 KRTAP1-5Q9BYS1 174 aa5.19□□□□□ -1.58
CSMD1-206ENST00000520002 VWFP04275 2813 aa5.18□□□□□ -1.58
CSMD1-206ENST00000520002 COL6A3P12111 3177 aa5.18□□□□□ -1.58
CSMD1-206ENST00000520002 ATMQ13315 3056 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms