RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 QSER1Q2KHR3 1735 aa-2.08□□□□□ -2.74
NPM1-206ENST00000519955 SPTBN5Q9NRC6 3674 aaKnown RBP-2.08□□□□□ -2.74
NPM1-206ENST00000519955 PREX1Q8TCU6 1659 aa-2.09□□□□□ -2.74
NPM1-206ENST00000519955 ITPR2Q14571 2701 aa-2.09□□□□□ -2.74
NPM1-206ENST00000519955 FAUP35544 74 aaKnown RBP-2.09□□□□□ -2.74
NPM1-206ENST00000519955 DEFB110Q30KQ9 67 aa-2.09□□□□□ -2.74
NPM1-206ENST00000519955 UBE2D4Q9Y2X8 147 aa-2.09□□□□□ -2.74
NPM1-206ENST00000519955 S4R3F8 94 aa-2.09□□□□□ -2.74
NPM1-206ENST00000519955 PKD1L3Q7Z443 1732 aa-2.09□□□□□ -2.74
NPM1-206ENST00000519955 CLTCQ00610 1675 aaKnown RBP-2.09□□□□□ -2.74
NPM1-206ENST00000519955 COX7BP24311 80 aa-2.1□□□□□ -2.75
NPM1-206ENST00000519955 DPY30Q9C005 99 aa-2.1□□□□□ -2.75
NPM1-206ENST00000519955 UBR3Q6ZT12 1888 aa-2.11□□□□□ -2.75
NPM1-206ENST00000519955 EPRSP07814 1512 aaKnown RBP-2.12□□□□□ -2.75
NPM1-206ENST00000519955 DMXL2Q8TDJ6 3036 aa-2.12□□□□□ -2.75
NPM1-206ENST00000519955 SPTAN1Q13813 2472 aaKnown RBP-2.14□□□□□ -2.75
NPM1-206ENST00000519955 MT1EP04732 61 aa-2.14□□□□□ -2.75
NPM1-206ENST00000519955 RPL38P63173 70 aaKnown RBP-2.14□□□□□ -2.75
NPM1-206ENST00000519955 SPENQ96T58 3664 aaKnown RBP-2.15□□□□□ -2.75
NPM1-206ENST00000519955 RGPD8O14715 1765 aaPredicted RBP-2.15□□□□□ -2.75
NPM1-206ENST00000519955 RGPD5Q99666 1765 aa-2.15□□□□□ -2.75
NPM1-206ENST00000519955 NDUFA3O95167 84 aa-2.16□□□□□ -2.76
NPM1-206ENST00000519955 FANCAO15360 1455 aa-2.16□□□□□ -2.76
NPM1-206ENST00000519955 LRRC9Q6ZRR7 1453 aa-2.16□□□□□ -2.76
NPM1-206ENST00000519955 TLN1Q9Y490 2541 aaKnown RBP-2.16□□□□□ -2.76
NPM1-206ENST00000519955 CNTLNQ9NXG0 1405 aa-2.17□□□□□ -2.76
NPM1-206ENST00000519955 ACBD7Q8N6N7 88 aa-2.17□□□□□ -2.76
NPM1-206ENST00000519955 RBP2P50120 134 aa-2.18□□□□□ -2.76
NPM1-206ENST00000519955 MT1LQ93083 61 aa-2.18□□□□□ -2.76
NPM1-206ENST00000519955 ALKQ9UM73 1620 aa-2.19□□□□□ -2.76
NPM1-206ENST00000519955 ATP6V1G2-DDX39BF2Z307 99 aa-2.19□□□□□ -2.76
NPM1-206ENST00000519955 SMR3BP02814 79 aaPredicted RBP-2.2□□□□□ -2.76
NPM1-206ENST00000519955 ATMQ13315 3056 aa-2.2□□□□□ -2.76
NPM1-206ENST00000519955 MYH4Q9Y623 1939 aa-2.21□□□□□ -2.76
NPM1-206ENST00000519955 ADGRG4Q8IZF6 3080 aa-2.21□□□□□ -2.76
NPM1-206ENST00000519955 LRRC7Q96NW7 1537 aa-2.21□□□□□ -2.76
NPM1-206ENST00000519955 C4AP0C0L4 1744 aa-2.22□□□□□ -2.76
NPM1-206ENST00000519955 C4BP0C0L5 1744 aa-2.22□□□□□ -2.76
NPM1-206ENST00000519955 A0A1B0GUT8 65 aa-2.22□□□□□ -2.76
NPM1-206ENST00000519955 MT1MQ8N339 61 aa-2.22□□□□□ -2.76
NPM1-206ENST00000519955 MT1GP13640 62 aa-2.23□□□□□ -2.77
NPM1-206ENST00000519955 PRLHP81277 87 aa-2.23□□□□□ -2.77
NPM1-206ENST00000519955 ATP10BO94823 1461 aa-2.24□□□□□ -2.77
NPM1-206ENST00000519955 GAFA1Q96PS6 74 aa-2.24□□□□□ -2.77
NPM1-206ENST00000519955 MT2AP02795 61 aa-2.25□□□□□ -2.77
NPM1-206ENST00000519955 HMGN2P05204 90 aaKnown RBP-2.25□□□□□ -2.77
NPM1-206ENST00000519955 MT1BP07438 61 aa-2.25□□□□□ -2.77
NPM1-206ENST00000519955 PLGLAQ15195 96 aa-2.25□□□□□ -2.77
NPM1-206ENST00000519955 KRTAP20-1Q3LI63 56 aa-2.25□□□□□ -2.77
NPM1-206ENST00000519955 MGAQ8IWI9 3026 aa-2.26□□□□□ -2.77
NPM1-206ENST00000519955 SMIM11AP58511 58 aa-2.26□□□□□ -2.77
NPM1-206ENST00000519955 BOD1L1Q8NFC6 3051 aa-2.27□□□□□ -2.77
NPM1-206ENST00000519955 IQCF6A8MYZ5 107 aa-2.27□□□□□ -2.77
NPM1-206ENST00000519955 ATP7BP35670 1465 aa-2.27□□□□□ -2.77
NPM1-206ENST00000519955 NCMAPQ5T1S8 102 aa-2.28□□□□□ -2.77
NPM1-206ENST00000519955 CLPSL2Q6UWE3 100 aa-2.28□□□□□ -2.77
NPM1-206ENST00000519955 CSMD2Q7Z408 3487 aa-2.28□□□□□ -2.77
NPM1-206ENST00000519955 TNRC6CQ9HCJ0 1690 aaKnown RBP-2.28□□□□□ -2.77
NPM1-206ENST00000519955 RGPD1P0DJD0 1748 aa-2.29□□□□□ -2.78
NPM1-206ENST00000519955 CYB5AP00167 134 aa-2.31□□□□□ -2.78
NPM1-206ENST00000519955 PEA15Q15121 130 aa-2.32□□□□□ -2.78
NPM1-206ENST00000519955 KRTAP8-1Q8IUC2 63 aa-2.32□□□□□ -2.78
NPM1-206ENST00000519955 TIAM2Q8IVF5 1701 aa-2.33□□□□□ -2.78
NPM1-206ENST00000519955 M0R143 59 aa-2.33□□□□□ -2.78
NPM1-206ENST00000519955 GYPAP02724 150 aa-2.34□□□□□ -2.78
NPM1-206ENST00000519955 CDC42BPAQ5VT25 1732 aa-2.34□□□□□ -2.78
NPM1-206ENST00000519955 C3orf79P0CE67 100 aa-2.35□□□□□ -2.79
NPM1-206ENST00000519955 CDC42BPGQ6DT37 1551 aa-2.36□□□□□ -2.79
NPM1-206ENST00000519955 FREM2Q5SZK8 3169 aa-2.36□□□□□ -2.79
NPM1-206ENST00000519955 SUPT6HQ7KZ85 1726 aaKnown RBP-2.36□□□□□ -2.79
NPM1-206ENST00000519955 ABCC10Q5T3U5 1492 aa-2.36□□□□□ -2.79
NPM1-206ENST00000519955 PRO3102Q9H379 93 aa-2.36□□□□□ -2.79
NPM1-206ENST00000519955 MYO3AQ8NEV4 1616 aa-2.36□□□□□ -2.79
NPM1-206ENST00000519955 PLXNC1O60486 1568 aa-2.36□□□□□ -2.79
NPM1-206ENST00000519955 BAZ1AQ9NRL2 1556 aaPredicted RBP-2.36□□□□□ -2.79
NPM1-206ENST00000519955 SCN11AQ9UI33 1791 aa-2.37□□□□□ -2.79
NPM1-206ENST00000519955 PEG3Q9GZU2 1588 aa-2.38□□□□□ -2.79
NPM1-206ENST00000519955 PRUNE2Q8WUY3 3088 aa-2.39□□□□□ -2.79
NPM1-206ENST00000519955 TRAV21A0A0B4J279 112 aa-2.39□□□□□ -2.79
NPM1-206ENST00000519955 NEXMIFQ5QGS0 1516 aa-2.39□□□□□ -2.79
NPM1-206ENST00000519955 WFDC9Q8NEX5 89 aa-2.4□□□□□ -2.79
NPM1-206ENST00000519955 C20orf78Q9BR46 151 aa-2.4□□□□□ -2.79
NPM1-206ENST00000519955 TNP1P09430 55 aa-2.41□□□□□ -2.8
NPM1-206ENST00000519955 ANKRD26Q9UPS8 1709 aa-2.42□□□□□ -2.8
NPM1-206ENST00000519955 LINC00158P58513 81 aa-2.42□□□□□ -2.8
NPM1-206ENST00000519955 DEFB106AQ8N104 65 aa-2.42□□□□□ -2.8
NPM1-206ENST00000519955 POLR1AO95602 1720 aaPredicted RBP-2.42□□□□□ -2.8
NPM1-206ENST00000519955 UBR1Q8IWV7 1749 aa-2.43□□□□□ -2.8
NPM1-206ENST00000519955 WIZO95785 1651 aa-2.44□□□□□ -2.8
NPM1-206ENST00000519955 MMP24-AS1A0A0U1RRL7 71 aa-2.44□□□□□ -2.8
NPM1-206ENST00000519955 RGPD3A6NKT7 1758 aaPredicted RBP-2.44□□□□□ -2.8
NPM1-206ENST00000519955 RGPD4Q7Z3J3 1758 aa-2.44□□□□□ -2.8
NPM1-206ENST00000519955 CEP162Q5TB80 1403 aa-2.44□□□□□ -2.8
NPM1-206ENST00000519955 CEP170BQ9Y4F5 1589 aaPredicted RBP-2.44□□□□□ -2.8
NPM1-206ENST00000519955 USP32Q8NFA0 1604 aa-2.45□□□□□ -2.8
NPM1-206ENST00000519955 NWD1Q149M9 1564 aa-2.45□□□□□ -2.8
NPM1-206ENST00000519955 ZFHX4Q86UP3 3567 aa-2.46□□□□□ -2.8
NPM1-206ENST00000519955 VPS8Q8N3P4 1428 aa-2.46□□□□□ -2.8
NPM1-206ENST00000519955 DEPDC5O75140 1603 aa-2.46□□□□□ -2.8
NPM1-206ENST00000519955 NESP48681 1621 aa-2.46□□□□□ -2.8
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms