RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 FREM2Q5SZK8 3169 aa2.14□□□□□ -2.07
CSMD3-209ENST00000519485 LINC01554Q52M75 96 aa2.14□□□□□ -2.07
CSMD3-209ENST00000519485 SPAG11AQ6PDA7 123 aa2.14□□□□□ -2.07
CSMD3-209ENST00000519485 KRTAP26-1Q6PEX3 210 aa2.14□□□□□ -2.07
CSMD3-209ENST00000519485 PLAC8Q9NZF1 115 aa2.14□□□□□ -2.07
CSMD3-209ENST00000519485 ZNF706Q9Y5V0 76 aaPredicted RBP2.14□□□□□ -2.07
CSMD3-209ENST00000519485 SPTA1P02549 2419 aa2.13□□□□□ -2.07
CSMD3-209ENST00000519485 CREBBPQ92793 2442 aa2.13□□□□□ -2.07
CSMD3-209ENST00000519485 ABCA2Q9BZC7 2435 aa2.13□□□□□ -2.07
CSMD3-209ENST00000519485 PRUNE2Q8WUY3 3088 aa2.13□□□□□ -2.07
CSMD3-209ENST00000519485 UQCR11O14957 56 aa2.13□□□□□ -2.07
CSMD3-209ENST00000519485 PP632Q6XCG6 107 aa2.13□□□□□ -2.07
CSMD3-209ENST00000519485 LINC00472Q9H8W2 130 aa2.13□□□□□ -2.07
CSMD3-209ENST00000519485 SPTAN1Q13813 2472 aaKnown RBP2.13□□□□□ -2.07
CSMD3-209ENST00000519485 TACC2O95359 2948 aa2.13□□□□□ -2.07
CSMD3-209ENST00000519485 ANKRD11Q6UB99 2663 aaPredicted RBP2.13□□□□□ -2.07
CSMD3-209ENST00000519485 WNK1Q9H4A3 2382 aa2.12□□□□□ -2.07
CSMD3-209ENST00000519485 IGKV2-24A0A0C4DH68 120 aa2.12□□□□□ -2.07
CSMD3-209ENST00000519485 A0A1B0GU69 56 aa2.12□□□□□ -2.07
CSMD3-209ENST00000519485 SPEGQ15772 3267 aa2.12□□□□□ -2.07
CSMD3-209ENST00000519485 MYO15AQ9UKN7 3530 aa2.12□□□□□ -2.07
CSMD3-209ENST00000519485 CR1P17927 2039 aa2.12□□□□□ -2.07
CSMD3-209ENST00000519485 AKAP6Q13023 2319 aa2.11□□□□□ -2.07
CSMD3-209ENST00000519485 MMP24-AS1A0A0U1RRL7 71 aa2.11□□□□□ -2.07
CSMD3-209ENST00000519485 LINC00313P59037 77 aa2.11□□□□□ -2.07
CSMD3-209ENST00000519485 DEFB116Q30KQ4 102 aa2.11□□□□□ -2.07
CSMD3-209ENST00000519485 SPATA8Q6RVD6 105 aa2.11□□□□□ -2.07
CSMD3-209ENST00000519485 MRPL34Q9BQ48 92 aaKnown RBP2.11□□□□□ -2.07
CSMD3-209ENST00000519485 C8orf17Q9NRJ1 99 aa2.11□□□□□ -2.07
CSMD3-209ENST00000519485 TLN1Q9Y490 2541 aaKnown RBP2.11□□□□□ -2.07
CSMD3-209ENST00000519485 AKAP13Q12802 2813 aa2.1□□□□□ -2.07
CSMD3-209ENST00000519485 A0A1B0GVX0 72 aa2.1□□□□□ -2.07
CSMD3-209ENST00000519485 DEFB4AO15263 64 aa2.1□□□□□ -2.07
CSMD3-209ENST00000519485 HRES1P13985 223 aa2.1□□□□□ -2.07
CSMD3-209ENST00000519485 MIR22HGQ0VDD5 57 aa2.1□□□□□ -2.07
CSMD3-209ENST00000519485 PCOTHQ58A44 107 aa2.1□□□□□ -2.07
CSMD3-209ENST00000519485 KRTAP5-7Q6L8G8 165 aa2.1□□□□□ -2.07
CSMD3-209ENST00000519485 DMXL2Q8TDJ6 3036 aa2.09□□□□□ -2.07
CSMD3-209ENST00000519485 BDP1A6H8Y1 2624 aa2.09□□□□□ -2.07
CSMD3-209ENST00000519485 LRBAP50851 2863 aa2.09□□□□□ -2.07
CSMD3-209ENST00000519485 LCE3DQ9BYE3 92 aa2.09□□□□□ -2.07
CSMD3-209ENST00000519485 CELSR3Q9NYQ7 3312 aa2.09□□□□□ -2.07
CSMD3-209ENST00000519485 CFAP47Q6ZTR5 3102 aa2.08□□□□□ -2.08
CSMD3-209ENST00000519485 HRNRQ86YZ3 2850 aaPredicted RBP2.08□□□□□ -2.08
CSMD3-209ENST00000519485 IGHV6-1A0A0B4J1U7 121 aa2.08□□□□□ -2.08
CSMD3-209ENST00000519485 SPINK7P58062 85 aa2.08□□□□□ -2.08
CSMD3-209ENST00000519485 ADGRG4Q8IZF6 3080 aa2.07□□□□□ -2.08
CSMD3-209ENST00000519485 WDFY4Q6ZS81 3184 aa2.07□□□□□ -2.08
CSMD3-209ENST00000519485 HIVEP3Q5T1R4 2406 aa2.07□□□□□ -2.08
CSMD3-209ENST00000519485 K7ERS5 55 aa2.07□□□□□ -2.08
CSMD3-209ENST00000519485 DMAC1Q96GE9 116 aa2.07□□□□□ -2.08
CSMD3-209ENST00000519485 CSPG4Q6UVK1 2322 aa2.07□□□□□ -2.08
CSMD3-209ENST00000519485 MGAQ8IWI9 3026 aa2.07□□□□□ -2.08
CSMD3-209ENST00000519485 MAP1AP78559 2803 aaPredicted RBP2.06□□□□□ -2.08
CSMD3-209ENST00000519485 C2CD3Q4AC94 2353 aa2.06□□□□□ -2.08
CSMD3-209ENST00000519485 PRLHP81277 87 aa2.06□□□□□ -2.08
CSMD3-209ENST00000519485 LINC00483Q53H64 154 aa2.06□□□□□ -2.08
CSMD3-209ENST00000519485 ZNF292O60281 2723 aa2.06□□□□□ -2.08
CSMD3-209ENST00000519485 DCHS2Q6V1P9 2916 aa2.04□□□□□ -2.08
CSMD3-209ENST00000519485 DCHS1Q96JQ0 3298 aa2.04□□□□□ -2.08
CSMD3-209ENST00000519485 A0A096LNI7 61 aa2.04□□□□□ -2.08
CSMD3-209ENST00000519485 LOC400499M0QZD8 3231 aa2.04□□□□□ -2.08
CSMD3-209ENST00000519485 SSBP3-AS1Q7Z2R9 100 aa2.04□□□□□ -2.08
CSMD3-209ENST00000519485 SMG1Q96Q15 3661 aaKnown RBP2.04□□□□□ -2.08
CSMD3-209ENST00000519485 CEP295Q9C0D2 2601 aa2.04□□□□□ -2.08
CSMD3-209ENST00000519485 GVINP1Q7Z2Y8 2422 aa2.03□□□□□ -2.08
CSMD3-209ENST00000519485 EYSQ5T1H1 3165 aa2.03□□□□□ -2.08
CSMD3-209ENST00000519485 BOD1L1Q8NFC6 3051 aa2.03□□□□□ -2.08
CSMD3-209ENST00000519485 ANKRD17O75179 2603 aaKnown RBP2.03□□□□□ -2.08
CSMD3-209ENST00000519485 ZFHX2Q9C0A1 2572 aaPredicted RBP2.03□□□□□ -2.08
CSMD3-209ENST00000519485 IGLV7-43P04211 117 aa2.03□□□□□ -2.08
CSMD3-209ENST00000519485 Q96NJ1 140 aa2.03□□□□□ -2.08
CSMD3-209ENST00000519485 DMDP11532 3685 aa2.03□□□□□ -2.08
CSMD3-209ENST00000519485 DOPEY1Q5JWR5 2465 aa2.02□□□□□ -2.09
CSMD3-209ENST00000519485 RIF1Q5UIP0 2472 aaKnown RBP2.02□□□□□ -2.09
CSMD3-209ENST00000519485 A0A1W2PNN7 141 aa2.02□□□□□ -2.09
CSMD3-209ENST00000519485 UBE2DNLQ8IWF7 75 aa2.02□□□□□ -2.09
CSMD3-209ENST00000519485 TLN2Q9Y4G6 2542 aa2.02□□□□□ -2.09
CSMD3-209ENST00000519485 ZFHX3Q15911 3703 aa2.02□□□□□ -2.09
CSMD3-209ENST00000519485 SPG11Q96JI7 2443 aa2.02□□□□□ -2.09
CSMD3-209ENST00000519485 NBASA2RRP1 2371 aa2.02□□□□□ -2.09
CSMD3-209ENST00000519485 MYO9AB2RTY4 2548 aa2.01□□□□□ -2.09
CSMD3-209ENST00000519485 NCOR2Q9Y618 2525 aa2.01□□□□□ -2.09
CSMD3-209ENST00000519485 CHD6Q8TD26 2715 aa2.01□□□□□ -2.09
CSMD3-209ENST00000519485 A0A0G2JQZ4 141 aa2.01□□□□□ -2.09
CSMD3-209ENST00000519485 CSAG1Q6PB30 78 aa2.01□□□□□ -2.09
CSMD3-209ENST00000519485 KRTAP13-1Q8IUC0 172 aa2.01□□□□□ -2.09
CSMD3-209ENST00000519485 ZFHX4Q86UP3 3567 aa2.01□□□□□ -2.09
CSMD3-209ENST00000519485 HMCN1Q96RW7 5635 aa2□□□□□ -2.09
CSMD3-209ENST00000519485 CELSR1Q9NYQ6 3014 aa2□□□□□ -2.09
CSMD3-209ENST00000519485 SPENQ96T58 3664 aaKnown RBP2□□□□□ -2.09
CSMD3-209ENST00000519485 CSMD1Q96PZ7 3565 aa2□□□□□ -2.09
CSMD3-209ENST00000519485 ZNF861PO60384 105 aa2□□□□□ -2.09
CSMD3-209ENST00000519485 LY6G6CO95867 125 aa2□□□□□ -2.09
CSMD3-209ENST00000519485 KRTAP25-1Q3LHN0 102 aa2□□□□□ -2.09
CSMD3-209ENST00000519485 C1orf134Q5TEV5 83 aa2□□□□□ -2.09
CSMD3-209ENST00000519485 Q5W150 140 aa1.99□□□□□ -2.09
CSMD3-209ENST00000519485 SETXQ7Z333 2677 aaKnown RBP1.99□□□□□ -2.09
CSMD3-209ENST00000519485 ATMQ13315 3056 aa1.99□□□□□ -2.09
CSMD3-209ENST00000519485 BSNQ9UPA5 3926 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms