RNA–Protein interactions for RNA: ENST00000518699.3

NKX6-3-201, Transcript of NK6 homeobox 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX6-3, Length 1,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-201ENST00000518699 NAA38Q9BRA0 125 aaKnown RBP13.35□□□□□ -0.27
NKX6-3-201ENST00000518699 C9orf153Q5TBE3 101 aa13.34□□□□□ -0.27
NKX6-3-201ENST00000518699 SSBP3-AS1Q7Z2R9 100 aa13.34□□□□□ -0.27
NKX6-3-201ENST00000518699 LST1O00453 97 aa13.33□□□□□ -0.27
NKX6-3-201ENST00000518699 LINC00304Q8N9R0 145 aa13.33□□□□□ -0.27
NKX6-3-201ENST00000518699 PCP4L1A6NKN8 68 aa13.32□□□□□ -0.28
NKX6-3-201ENST00000518699 DNAL4O96015 105 aa13.32□□□□□ -0.28
NKX6-3-201ENST00000518699 TAX1BP3O14907 124 aa13.32□□□□□ -0.28
NKX6-3-201ENST00000518699 HERC1Q15751 4861 aa13.31□□□□□ -0.28
NKX6-3-201ENST00000518699 GHRHP01286 108 aa13.31□□□□□ -0.28
NKX6-3-201ENST00000518699 TRACP01848 142 aa13.31□□□□□ -0.28
NKX6-3-201ENST00000518699 LYRM7Q5U5X0 104 aa13.3□□□□□ -0.28
NKX6-3-201ENST00000518699 C9orf118A6NHY6 69 aa13.29□□□□□ -0.28
NKX6-3-201ENST00000518699 H3BUT2 72 aa13.29□□□□□ -0.28
NKX6-3-201ENST00000518699 SPAG11AQ6PDA7 123 aa13.27□□□□□ -0.29
NKX6-3-201ENST00000518699 F8WEM9 126 aa13.26□□□□□ -0.29
NKX6-3-201ENST00000518699 COL5A1-AS1Q5SY13 56 aa13.26□□□□□ -0.29
NKX6-3-201ENST00000518699 ORMDL1Q9P0S3 153 aa13.26□□□□□ -0.29
NKX6-3-201ENST00000518699 TCL1BO95988 128 aa13.25□□□□□ -0.29
NKX6-3-201ENST00000518699 H3BQ85 93 aa13.24□□□□□ -0.29
NKX6-3-201ENST00000518699 ATXN8Q156A1 80 aa13.24□□□□□ -0.29
NKX6-3-201ENST00000518699 IGLV8-61A0A075B6I0 122 aa13.22□□□□□ -0.29
NKX6-3-201ENST00000518699 TRBV20-1A0A075B6N2 111 aa13.21□□□□□ -0.29
NKX6-3-201ENST00000518699 A0A1W2PPM0 123 aa13.21□□□□□ -0.29
NKX6-3-201ENST00000518699 C4orf48Q5BLP8 95 aa13.21□□□□□ -0.29
NKX6-3-201ENST00000518699 SPINK1P00995 79 aa13.2□□□□□ -0.3
NKX6-3-201ENST00000518699 FABP2P12104 132 aa13.2□□□□□ -0.3
NKX6-3-201ENST00000518699 NDUFV3P56181 108 aaKnown RBP13.2□□□□□ -0.3
NKX6-3-201ENST00000518699 TMEM256-PLSCR3K7ERE1 68 aa13.19□□□□□ -0.3
NKX6-3-201ENST00000518699 RPS29P62273 56 aaKnown RBP13.18□□□□□ -0.3
NKX6-3-201ENST00000518699 Q6JHZ5 121 aa13.17□□□□□ -0.3
NKX6-3-201ENST00000518699 CD164Q04900 197 aa13.16□□□□□ -0.3
NKX6-3-201ENST00000518699 UBE2V1Q13404 147 aa13.14□□□□□ -0.31
NKX6-3-201ENST00000518699 IGFL1Q6UW32 110 aa13.12□□□□□ -0.31
NKX6-3-201ENST00000518699 A0A0G2JQZ4 141 aa13.11□□□□□ -0.31
NKX6-3-201ENST00000518699 H3BMG7 143 aa13.1□□□□□ -0.31
NKX6-3-201ENST00000518699 BAALC-AS2P0C853 105 aa13.09□□□□□ -0.31
NKX6-3-201ENST00000518699 HMCN2Q8NDA2 5059 aa13.08□□□□□ -0.32
NKX6-3-201ENST00000518699 HRCT1Q6UXD1 115 aa13.07□□□□□ -0.32
NKX6-3-201ENST00000518699 SPCS1Q9Y6A9 102 aa13.07□□□□□ -0.32
NKX6-3-201ENST00000518699 C9JAW5 83 aa13.06□□□□□ -0.32
NKX6-3-201ENST00000518699 ANKRD29Q8N6D5 301 aa13.06□□□□□ -0.32
NKX6-3-201ENST00000518699 LIMD2Q9BT23 127 aa13.05□□□□□ -0.32
NKX6-3-201ENST00000518699 Q5XG85 94 aa13.02□□□□□ -0.33
NKX6-3-201ENST00000518699 Q6Q795 121 aa13.01□□□□□ -0.33
NKX6-3-201ENST00000518699 RETNLBQ9BQ08 111 aa13.01□□□□□ -0.33
NKX6-3-201ENST00000518699 TRBV7-7A0A0K0K1E9 115 aa12.99□□□□□ -0.33
NKX6-3-201ENST00000518699 A0A1B0GV72 72 aa12.99□□□□□ -0.33
NKX6-3-201ENST00000518699 H3BT86 120 aa12.99□□□□□ -0.33
NKX6-3-201ENST00000518699 K7EP34 96 aa12.98□□□□□ -0.33
NKX6-3-201ENST00000518699 RBM3P98179 157 aaKnown RBP12.96□□□□□ -0.33
NKX6-3-201ENST00000518699 PRR4Q16378 134 aa12.96□□□□□ -0.33
NKX6-3-201ENST00000518699 TEN1Q86WV5 123 aa12.96□□□□□ -0.33
NKX6-3-201ENST00000518699 TRBV7-4A0A0J9YYF1 115 aa12.95□□□□□ -0.34
NKX6-3-201ENST00000518699 JMJD7-PLA2G4BH0Y9G9 81 aa12.94□□□□□ -0.34
NKX6-3-201ENST00000518699 FP248Q71RG6 208 aaPredicted RBP12.94□□□□□ -0.34
NKX6-3-201ENST00000518699 MTURNQ8N3F0 131 aa12.94□□□□□ -0.34
NKX6-3-201ENST00000518699 A0A1W2PNM2 257 aa12.93□□□□□ -0.34
NKX6-3-201ENST00000518699 DSCR8Q96T75 97 aa12.92□□□□□ -0.34
NKX6-3-201ENST00000518699 GTF2H5Q6ZYL4 71 aa12.9□□□□□ -0.34
NKX6-3-201ENST00000518699 OBSCN-AS1Q96MR7 158 aa12.9□□□□□ -0.34
NKX6-3-201ENST00000518699 ASB16-AS1Q495Z4 193 aa12.89□□□□□ -0.35
NKX6-3-201ENST00000518699 CCKP06307 115 aa12.87□□□□□ -0.35
NKX6-3-201ENST00000518699 IGLV7-46A0A075B6I9 117 aa12.86□□□□□ -0.35
NKX6-3-201ENST00000518699 SS18L2Q9UHA2 77 aa12.86□□□□□ -0.35
NKX6-3-201ENST00000518699 PRO0461Q9UI25 63 aa12.86□□□□□ -0.35
NKX6-3-201ENST00000518699 LOC110117498A0A087WWA1 95 aa12.85□□□□□ -0.35
NKX6-3-201ENST00000518699 SMCPP49901 116 aaPredicted RBP12.85□□□□□ -0.35
NKX6-3-201ENST00000518699 A0A087WSZ3 146 aa12.84□□□□□ -0.35
NKX6-3-201ENST00000518699 C1orf195Q5TG92 126 aa12.84□□□□□ -0.35
NKX6-3-201ENST00000518699 PDE6GP18545 87 aa12.82□□□□□ -0.36
NKX6-3-201ENST00000518699 Q6ZQT0 140 aa12.82□□□□□ -0.36
NKX6-3-201ENST00000518699 C14orf132Q9NPU4 83 aa12.81□□□□□ -0.36
NKX6-3-201ENST00000518699 TPRXLQ17RH7 258 aa12.81□□□□□ -0.36
NKX6-3-201ENST00000518699 VPS25Q9BRG1 176 aa12.79□□□□□ -0.36
NKX6-3-201ENST00000518699 C21orf62-AS1Q17RA5 79 aa12.78□□□□□ -0.36
NKX6-3-201ENST00000518699 LPAP08519 4548 aa12.76□□□□□ -0.37
NKX6-3-201ENST00000518699 F8W1H4 67 aa12.74□□□□□ -0.37
NKX6-3-201ENST00000518699 KRTAP13-3Q3SY46 172 aa12.74□□□□□ -0.37
NKX6-3-201ENST00000518699 LRP2P98164 4655 aa12.73□□□□□ -0.37
NKX6-3-201ENST00000518699 A0A1B0GW54 56 aa12.73□□□□□ -0.37
NKX6-3-201ENST00000518699 Q96NJ1 140 aa12.71□□□□□ -0.37
NKX6-3-201ENST00000518699 A0A1B0GV90 55 aa12.66□□□□□ -0.38
NKX6-3-201ENST00000518699 CDIP1Q9H305 208 aa12.64□□□□□ -0.39
NKX6-3-201ENST00000518699 LINC00472Q9H8W2 130 aa12.64□□□□□ -0.39
NKX6-3-201ENST00000518699 ETDBQ3ZM63 59 aa12.6□□□□□ -0.39
NKX6-3-201ENST00000518699 UBR4Q5T4S7 5183 aa12.58□□□□□ -0.4
NKX6-3-201ENST00000518699 IGKV4-1P06312 121 aa12.56□□□□□ -0.4
NKX6-3-201ENST00000518699 SIGMAR1Q99720 223 aa12.56□□□□□ -0.4
NKX6-3-201ENST00000518699 C9orf92A6NGG3 77 aa12.55□□□□□ -0.4
NKX6-3-201ENST00000518699 XP32Q5T750 250 aa12.54□□□□□ -0.4
NKX6-3-201ENST00000518699 J3KT08 172 aa12.52□□□□□ -0.41
NKX6-3-201ENST00000518699 DEFB116Q30KQ4 102 aa12.52□□□□□ -0.41
NKX6-3-201ENST00000518699 NREPQ16612 68 aa12.49□□□□□ -0.41
NKX6-3-201ENST00000518699 MUC17Q685J3 4493 aa12.43□□□□□ -0.42
NKX6-3-201ENST00000518699 Q6ZVQ6 151 aa12.43□□□□□ -0.42
NKX6-3-201ENST00000518699 A0A1B0GVX0 72 aa12.42□□□□□ -0.42
NKX6-3-201ENST00000518699 LINC00846Q9NV44 126 aa12.42□□□□□ -0.42
NKX6-3-201ENST00000518699 A8MWP4 228 aa12.39□□□□□ -0.43
NKX6-3-201ENST00000518699 DSCR10P59022 87 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms