RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 LMO7Q8WWI1 1683 aa1.2□□□□□ -2.22
RNU4-60P-201ENST00000517239 CACNA1HO95180 2353 aa1.2□□□□□ -2.22
RNU4-60P-201ENST00000517239 C2CD3Q4AC94 2353 aa1.2□□□□□ -2.22
RNU4-60P-201ENST00000517239 ZNF292O60281 2723 aa1.2□□□□□ -2.22
RNU4-60P-201ENST00000517239 CFAP46Q8IYW2 2715 aa1.2□□□□□ -2.22
RNU4-60P-201ENST00000517239 PIEZO1Q92508 2521 aa1.2□□□□□ -2.22
RNU4-60P-201ENST00000517239 ABRACLQ9P1F3 81 aa1.2□□□□□ -2.22
RNU4-60P-201ENST00000517239 USP34Q70CQ2 3546 aa1.2□□□□□ -2.22
RNU4-60P-201ENST00000517239 MYO9AB2RTY4 2548 aa1.2□□□□□ -2.22
RNU4-60P-201ENST00000517239 DCHS1Q96JQ0 3298 aa1.2□□□□□ -2.22
RNU4-60P-201ENST00000517239 DOPEY1Q5JWR5 2465 aa1.2□□□□□ -2.22
RNU4-60P-201ENST00000517239 GCC2Q8IWJ2 1684 aa1.2□□□□□ -2.22
RNU4-60P-201ENST00000517239 XIRP2A4UGR9 3374 aa1.19□□□□□ -2.22
RNU4-60P-201ENST00000517239 CHD8Q9HCK8 2581 aa1.19□□□□□ -2.22
RNU4-60P-201ENST00000517239 FLNBO75369 2602 aaKnown RBP1.19□□□□□ -2.22
RNU4-60P-201ENST00000517239 HECTD1Q9ULT8 2610 aa1.19□□□□□ -2.22
RNU4-60P-201ENST00000517239 DMXL1Q9Y485 3027 aa1.19□□□□□ -2.22
RNU4-60P-201ENST00000517239 USP9XQ93008 2570 aaPredicted RBP1.19□□□□□ -2.22
RNU4-60P-201ENST00000517239 CDH23Q9H251 3354 aa1.19□□□□□ -2.22
RNU4-60P-201ENST00000517239 DNAH12Q6ZR08 3092 aa1.19□□□□□ -2.22
RNU4-60P-201ENST00000517239 USP24Q9UPU5 2620 aa1.19□□□□□ -2.22
RNU4-60P-201ENST00000517239 WDR87Q6ZQQ6 2873 aa1.18□□□□□ -2.22
RNU4-60P-201ENST00000517239 NCOR1O75376 2440 aa1.18□□□□□ -2.22
RNU4-60P-201ENST00000517239 MINOS1Q5TGZ0 78 aa1.18□□□□□ -2.22
RNU4-60P-201ENST00000517239 TIMM8BQ9Y5J9 83 aaPredicted RBP1.18□□□□□ -2.22
RNU4-60P-201ENST00000517239 ATP7AQ04656 1500 aa1.18□□□□□ -2.22
RNU4-60P-201ENST00000517239 ZFYVE26Q68DK2 2539 aa1.18□□□□□ -2.22
RNU4-60P-201ENST00000517239 POLQO75417 2590 aa1.17□□□□□ -2.22
RNU4-60P-201ENST00000517239 MYO18BQ8IUG5 2567 aa1.17□□□□□ -2.22
RNU4-60P-201ENST00000517239 TPRP12270 2363 aaKnown RBP1.17□□□□□ -2.22
RNU4-60P-201ENST00000517239 H0YGX0 51 aa1.17□□□□□ -2.22
RNU4-60P-201ENST00000517239 VPS13AQ96RL7 3174 aa1.17□□□□□ -2.22
RNU4-60P-201ENST00000517239 NBEAQ8NFP9 2946 aa1.16□□□□□ -2.22
RNU4-60P-201ENST00000517239 CLTCL1P53675 1640 aa1.16□□□□□ -2.22
RNU4-60P-201ENST00000517239 SMIM27A0A1W2PRY6 76 aa1.16□□□□□ -2.22
RNU4-60P-201ENST00000517239 LYNX1G3V0Z9 82 aa1.16□□□□□ -2.22
RNU4-60P-201ENST00000517239 KRTAP5-5Q701N2 237 aaPredicted RBP1.16□□□□□ -2.22
RNU4-60P-201ENST00000517239 SPTBN2O15020 2390 aa1.16□□□□□ -2.22
RNU4-60P-201ENST00000517239 RELNP78509 3460 aa1.16□□□□□ -2.22
RNU4-60P-201ENST00000517239 ABCA12Q86UK0 2595 aa1.15□□□□□ -2.22
RNU4-60P-201ENST00000517239 FRYQ5TBA9 3013 aa1.15□□□□□ -2.23
RNU4-60P-201ENST00000517239 LOC400499M0QZD8 3231 aa1.15□□□□□ -2.23
RNU4-60P-201ENST00000517239 SPINK4O60575 86 aa1.15□□□□□ -2.23
RNU4-60P-201ENST00000517239 IAPPP10997 89 aa1.15□□□□□ -2.23
RNU4-60P-201ENST00000517239 TMEM167BQ9NRX6 74 aa1.15□□□□□ -2.23
RNU4-60P-201ENST00000517239 TENM4Q6N022 2769 aa1.15□□□□□ -2.23
RNU4-60P-201ENST00000517239 ASPMQ8IZT6 3477 aa1.14□□□□□ -2.23
RNU4-60P-201ENST00000517239 NCOR2Q9Y618 2525 aa1.14□□□□□ -2.23
RNU4-60P-201ENST00000517239 ACACBO00763 2458 aa1.14□□□□□ -2.23
RNU4-60P-201ENST00000517239 TRIOO75962 3097 aa1.13□□□□□ -2.23
RNU4-60P-201ENST00000517239 DEFB109BQ30KR1 87 aa1.13□□□□□ -2.23
RNU4-60P-201ENST00000517239 C6orf48Q9UBA6 75 aa1.13□□□□□ -2.23
RNU4-60P-201ENST00000517239 FRYLO94915 3013 aa1.13□□□□□ -2.23
RNU4-60P-201ENST00000517239 KALRNO60229 2985 aa1.13□□□□□ -2.23
RNU4-60P-201ENST00000517239 FBN3Q75N90 2809 aa1.12□□□□□ -2.23
RNU4-60P-201ENST00000517239 TEX15Q9BXT5 2789 aa1.12□□□□□ -2.23
RNU4-60P-201ENST00000517239 LINC00308Q8TCZ7 52 aa1.12□□□□□ -2.23
RNU4-60P-201ENST00000517239 SPG11Q96JI7 2443 aa1.12□□□□□ -2.23
RNU4-60P-201ENST00000517239 CELSR3Q9NYQ7 3312 aa1.12□□□□□ -2.23
RNU4-60P-201ENST00000517239 CHD7Q9P2D1 2997 aa1.12□□□□□ -2.23
RNU4-60P-201ENST00000517239 MYO15AQ9UKN7 3530 aa1.12□□□□□ -2.23
RNU4-60P-201ENST00000517239 ZZEF1O43149 2961 aa1.11□□□□□ -2.23
RNU4-60P-201ENST00000517239 NOTCH2Q04721 2471 aa1.11□□□□□ -2.23
RNU4-60P-201ENST00000517239 PTPN13Q12923 2485 aa1.11□□□□□ -2.23
RNU4-60P-201ENST00000517239 TRPM2O94759 1503 aa1.11□□□□□ -2.23
RNU4-60P-201ENST00000517239 DNAH14Q0VDD8 3507 aa1.11□□□□□ -2.23
RNU4-60P-201ENST00000517239 DEFB130BP0DP73 79 aa1.11□□□□□ -2.23
RNU4-60P-201ENST00000517239 DEFB130AP0DP74 79 aa1.11□□□□□ -2.23
RNU4-60P-201ENST00000517239 CHD9Q3L8U1 2897 aa1.11□□□□□ -2.23
RNU4-60P-201ENST00000517239 FREM2Q5SZK8 3169 aa1.1□□□□□ -2.23
RNU4-60P-201ENST00000517239 WDFY3Q8IZQ1 3526 aa1.1□□□□□ -2.23
RNU4-60P-201ENST00000517239 COL12A1Q99715 3063 aa1.1□□□□□ -2.23
RNU4-60P-201ENST00000517239 SPTAN1Q13813 2472 aaKnown RBP1.1□□□□□ -2.23
RNU4-60P-201ENST00000517239 LINC01546A6NGU7 62 aa1.1□□□□□ -2.23
RNU4-60P-201ENST00000517239 KRTAP5-1Q6L8H4 278 aa1.1□□□□□ -2.23
RNU4-60P-201ENST00000517239 UBR5O95071 2799 aaPredicted RBP1.1□□□□□ -2.23
RNU4-60P-201ENST00000517239 ITPR1Q14643 2758 aa1.09□□□□□ -2.23
RNU4-60P-201ENST00000517239 DSPP15924 2871 aaKnown RBP1.09□□□□□ -2.23
RNU4-60P-201ENST00000517239 LCE1CQ5T751 118 aa1.09□□□□□ -2.23
RNU4-60P-201ENST00000517239 LCE1BQ5T7P3 118 aa1.09□□□□□ -2.23
RNU4-60P-201ENST00000517239 FAM186AA6NE01 2351 aa1.09□□□□□ -2.23
RNU4-60P-201ENST00000517239 SPTBN1Q01082 2364 aaKnown RBP1.09□□□□□ -2.23
RNU4-60P-201ENST00000517239 UTP20O75691 2785 aaKnown RBP1.09□□□□□ -2.24
RNU4-60P-201ENST00000517239 GVINP1Q7Z2Y8 2422 aa1.09□□□□□ -2.24
RNU4-60P-201ENST00000517239 IGF2RP11717 2491 aa1.09□□□□□ -2.24
RNU4-60P-201ENST00000517239 NFAT5O94916 1531 aa1.09□□□□□ -2.24
RNU4-60P-201ENST00000517239 FBN2P35556 2912 aa1.08□□□□□ -2.24
RNU4-60P-201ENST00000517239 CELSR2Q9HCU4 2923 aa1.08□□□□□ -2.24
RNU4-60P-201ENST00000517239 TLN1Q9Y490 2541 aaKnown RBP1.08□□□□□ -2.24
RNU4-60P-201ENST00000517239 BOD1L1Q8NFC6 3051 aa1.07□□□□□ -2.24
RNU4-60P-201ENST00000517239 ABCA2Q9BZC7 2435 aa1.07□□□□□ -2.24
RNU4-60P-201ENST00000517239 SMG1Q96Q15 3661 aaKnown RBP1.07□□□□□ -2.24
RNU4-60P-201ENST00000517239 CELSR1Q9NYQ6 3014 aa1.07□□□□□ -2.24
RNU4-60P-201ENST00000517239 IGSF10Q6WRI0 2623 aa1.07□□□□□ -2.24
RNU4-60P-201ENST00000517239 F8P00451 2351 aa1.07□□□□□ -2.24
RNU4-60P-201ENST00000517239 RIF1Q5UIP0 2472 aaKnown RBP1.07□□□□□ -2.24
RNU4-60P-201ENST00000517239 ALMS1Q8TCU4 4167 aa1.07□□□□□ -2.24
RNU4-60P-201ENST00000517239 PDZD2O15018 2839 aa1.07□□□□□ -2.24
RNU4-60P-201ENST00000517239 DMDP11532 3685 aa1.07□□□□□ -2.24
RNU4-60P-201ENST00000517239 CRYBG3Q68DQ2 2970 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms