RNA–Protein interactions for RNA: ENST00000513946.1

PROM1-216, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-216ENST00000513946 REV3LO60673 3130 aa1.93□□□□□ -2.1
PROM1-216ENST00000513946 ZZEF1O43149 2961 aa1.92□□□□□ -2.1
PROM1-216ENST00000513946 PRUNE2Q8WUY3 3088 aa1.92□□□□□ -2.1
PROM1-216ENST00000513946 VCANP13611 3396 aa1.92□□□□□ -2.1
PROM1-216ENST00000513946 ZDBF2Q9HCK1 2354 aa1.92□□□□□ -2.1
PROM1-216ENST00000513946 PRB1P04280 392 aa1.92□□□□□ -2.1
PROM1-216ENST00000513946 DEFB116Q30KQ4 102 aa1.92□□□□□ -2.1
PROM1-216ENST00000513946 KRTAP25-1Q3LHN0 102 aa1.92□□□□□ -2.1
PROM1-216ENST00000513946 C1orf134Q5TEV5 83 aa1.92□□□□□ -2.1
PROM1-216ENST00000513946 CNOT1A5YKK6 2376 aaKnown RBP1.92□□□□□ -2.1
PROM1-216ENST00000513946 SPTBN2O15020 2390 aa1.92□□□□□ -2.1
PROM1-216ENST00000513946 EYSQ5T1H1 3165 aa1.92□□□□□ -2.1
PROM1-216ENST00000513946 NCOR1O75376 2440 aa1.91□□□□□ -2.1
PROM1-216ENST00000513946 EP300Q09472 2414 aaPredicted RBP1.91□□□□□ -2.1
PROM1-216ENST00000513946 WNK1Q9H4A3 2382 aa1.91□□□□□ -2.1
PROM1-216ENST00000513946 DNAH14Q0VDD8 3507 aa1.91□□□□□ -2.1
PROM1-216ENST00000513946 MED13LQ71F56 2210 aa1.91□□□□□ -2.1
PROM1-216ENST00000513946 C5orf42Q9H799 3197 aa1.91□□□□□ -2.1
PROM1-216ENST00000513946 TRIOBPQ9H2D6 2365 aa1.91□□□□□ -2.1
PROM1-216ENST00000513946 SPTA1P02549 2419 aa1.9□□□□□ -2.1
PROM1-216ENST00000513946 TRIOO75962 3097 aa1.9□□□□□ -2.1
PROM1-216ENST00000513946 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.9□□□□□ -2.1
PROM1-216ENST00000513946 SPTAN1Q13813 2472 aaKnown RBP1.9□□□□□ -2.11
PROM1-216ENST00000513946 TTC28Q96AY4 2481 aa1.9□□□□□ -2.11
PROM1-216ENST00000513946 ZNF861PO60384 105 aa1.9□□□□□ -2.11
PROM1-216ENST00000513946 CSAG1Q6PB30 78 aa1.9□□□□□ -2.11
PROM1-216ENST00000513946 PIEZO2Q9H5I5 2752 aa1.9□□□□□ -2.11
PROM1-216ENST00000513946 ACACAQ13085 2346 aa1.9□□□□□ -2.11
PROM1-216ENST00000513946 NBEAQ8NFP9 2946 aa1.9□□□□□ -2.11
PROM1-216ENST00000513946 APC2O95996 2303 aa1.89□□□□□ -2.11
PROM1-216ENST00000513946 PTPRQQ9UMZ3 2332 aa1.89□□□□□ -2.11
PROM1-216ENST00000513946 A0A1B0GU33 70 aa1.89□□□□□ -2.11
PROM1-216ENST00000513946 NUPR2A6NF83 97 aa1.89□□□□□ -2.11
PROM1-216ENST00000513946 RPS29P62273 56 aaKnown RBP1.89□□□□□ -2.11
PROM1-216ENST00000513946 PRLHP81277 87 aa1.89□□□□□ -2.11
PROM1-216ENST00000513946 UBE2DNLQ8IWF7 75 aa1.89□□□□□ -2.11
PROM1-216ENST00000513946 GPR179Q6PRD1 2367 aa1.89□□□□□ -2.11
PROM1-216ENST00000513946 FRYQ5TBA9 3013 aa1.89□□□□□ -2.11
PROM1-216ENST00000513946 LAMA1P25391 3075 aa1.88□□□□□ -2.11
PROM1-216ENST00000513946 KRTAP10-10P60014 251 aa1.88□□□□□ -2.11
PROM1-216ENST00000513946 CAMK2N1Q7Z7J9 78 aa1.88□□□□□ -2.11
PROM1-216ENST00000513946 CRIPTQ9P021 101 aa1.88□□□□□ -2.11
PROM1-216ENST00000513946 VPS13AQ96RL7 3174 aa1.88□□□□□ -2.11
PROM1-216ENST00000513946 A0A096LNI7 61 aa1.87□□□□□ -2.11
PROM1-216ENST00000513946 XIRP2A4UGR9 3374 aa1.87□□□□□ -2.11
PROM1-216ENST00000513946 DEFB4AO15263 64 aa1.87□□□□□ -2.11
PROM1-216ENST00000513946 SPINK1P00995 79 aa1.87□□□□□ -2.11
PROM1-216ENST00000513946 OTOGLQ3ZCN5 2332 aa1.87□□□□□ -2.11
PROM1-216ENST00000513946 KRTAP13-1Q8IUC0 172 aa1.87□□□□□ -2.11
PROM1-216ENST00000513946 Q96NJ1 140 aa1.87□□□□□ -2.11
PROM1-216ENST00000513946 SORL1Q92673 2214 aa1.86□□□□□ -2.11
PROM1-216ENST00000513946 CFAP54Q96N23 3096 aa1.86□□□□□ -2.11
PROM1-216ENST00000513946 Q5W150 140 aa1.86□□□□□ -2.11
PROM1-216ENST00000513946 DMDP11532 3685 aa1.86□□□□□ -2.11
PROM1-216ENST00000513946 AKAP6Q13023 2319 aa1.86□□□□□ -2.11
PROM1-216ENST00000513946 PCNX1Q96RV3 2341 aa1.86□□□□□ -2.11
PROM1-216ENST00000513946 C2CD3Q4AC94 2353 aa1.85□□□□□ -2.11
PROM1-216ENST00000513946 A0A1W2PNN7 141 aa1.85□□□□□ -2.11
PROM1-216ENST00000513946 A8MUU9 505 aa1.85□□□□□ -2.11
PROM1-216ENST00000513946 SPINT4Q6UDR6 99 aa1.85□□□□□ -2.11
PROM1-216ENST00000513946 PRRC2CQ9Y520 2896 aaKnown RBP1.85□□□□□ -2.11
PROM1-216ENST00000513946 ADGRG4Q8IZF6 3080 aa1.84□□□□□ -2.11
PROM1-216ENST00000513946 RPL37P61927 97 aaKnown RBP1.84□□□□□ -2.11
PROM1-216ENST00000513946 SPACA4Q8TDM5 124 aa1.84□□□□□ -2.11
PROM1-216ENST00000513946 FRYLO94915 3013 aa1.84□□□□□ -2.12
PROM1-216ENST00000513946 KALRNO60229 2985 aa1.83□□□□□ -2.12
PROM1-216ENST00000513946 KRTAP5-7Q6L8G8 165 aa1.83□□□□□ -2.12
PROM1-216ENST00000513946 ZNF292O60281 2723 aa1.83□□□□□ -2.12
PROM1-216ENST00000513946 MYO15AQ9UKN7 3530 aa1.83□□□□□ -2.12
PROM1-216ENST00000513946 CR1P17927 2039 aa1.83□□□□□ -2.12
PROM1-216ENST00000513946 NBDYA0A0U1RRE5 68 aa1.82□□□□□ -2.12
PROM1-216ENST00000513946 H1FX-AS1Q4G0G2 97 aa1.82□□□□□ -2.12
PROM1-216ENST00000513946 LUZP6Q538Z0 58 aa1.82□□□□□ -2.12
PROM1-216ENST00000513946 SPINK6Q6UWN8 80 aa1.82□□□□□ -2.12
PROM1-216ENST00000513946 CIRBP-AS1Q8TBR5 109 aa1.82□□□□□ -2.12
PROM1-216ENST00000513946 WDFY4Q6ZS81 3184 aa1.82□□□□□ -2.12
PROM1-216ENST00000513946 PIEZO1Q92508 2521 aa1.82□□□□□ -2.12
PROM1-216ENST00000513946 TLN1Q9Y490 2541 aaKnown RBP1.82□□□□□ -2.12
PROM1-216ENST00000513946 USP34Q70CQ2 3546 aa1.82□□□□□ -2.12
PROM1-216ENST00000513946 FREM2Q5SZK8 3169 aa1.82□□□□□ -2.12
PROM1-216ENST00000513946 WDFY3Q8IZQ1 3526 aa1.81□□□□□ -2.12
PROM1-216ENST00000513946 MUC19Q7Z5P9 8384 aa1.81□□□□□ -2.12
PROM1-216ENST00000513946 LINC00304Q8N9R0 145 aa1.81□□□□□ -2.12
PROM1-216ENST00000513946 DSPP15924 2871 aaKnown RBP1.81□□□□□ -2.12
PROM1-216ENST00000513946 SPTBN4Q9H254 2564 aa1.81□□□□□ -2.12
PROM1-216ENST00000513946 CSPG4Q6UVK1 2322 aa1.8□□□□□ -2.12
PROM1-216ENST00000513946 MUC6Q6W4X9 2439 aa1.8□□□□□ -2.12
PROM1-216ENST00000513946 SPRR5A0A1B0GTR4 108 aa1.8□□□□□ -2.12
PROM1-216ENST00000513946 J3QKU1 62 aa1.8□□□□□ -2.12
PROM1-216ENST00000513946 C20orf166-AS1Q96NR2 134 aa1.8□□□□□ -2.12
PROM1-216ENST00000513946 PSORS1C2Q9UIG4 136 aa1.8□□□□□ -2.12
PROM1-216ENST00000513946 CACNA1AO00555 2505 aa1.8□□□□□ -2.12
PROM1-216ENST00000513946 DOPEY1Q5JWR5 2465 aa1.79□□□□□ -2.12
PROM1-216ENST00000513946 DCHS1Q96JQ0 3298 aa1.79□□□□□ -2.12
PROM1-216ENST00000513946 HMCN1Q96RW7 5635 aa1.79□□□□□ -2.12
PROM1-216ENST00000513946 KMT2BQ9UMN6 2715 aaPredicted RBP1.79□□□□□ -2.12
PROM1-216ENST00000513946 ANKRD11Q6UB99 2663 aaPredicted RBP1.78□□□□□ -2.12
PROM1-216ENST00000513946 NBASA2RRP1 2371 aa1.78□□□□□ -2.12
PROM1-216ENST00000513946 M0QZ58 72 aa1.78□□□□□ -2.12
PROM1-216ENST00000513946 Q6ZSA8 131 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms