RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 RGPD5Q99666 1765 aa-0.4□□□□□ -2.47
TRAPPC11-210ENST00000513600 LRRC9Q6ZRR7 1453 aa-0.4□□□□□ -2.47
TRAPPC11-210ENST00000513600 CENPEQ02224 2701 aa-0.4□□□□□ -2.47
TRAPPC11-210ENST00000513600 AKAP9Q99996 3911 aa-0.4□□□□□ -2.47
TRAPPC11-210ENST00000513600 IQCF6A8MYZ5 107 aa-0.4□□□□□ -2.47
TRAPPC11-210ENST00000513600 MT1HL1P0DM35 61 aa-0.4□□□□□ -2.47
TRAPPC11-210ENST00000513600 KRTAP19-6Q3LI70 58 aa-0.4□□□□□ -2.47
TRAPPC11-210ENST00000513600 PYY3Q5JQD4 70 aa-0.4□□□□□ -2.47
TRAPPC11-210ENST00000513600 NEXMIFQ5QGS0 1516 aa-0.4□□□□□ -2.47
TRAPPC11-210ENST00000513600 CHD7Q9P2D1 2997 aa-0.4□□□□□ -2.47
TRAPPC11-210ENST00000513600 PREX1Q8TCU6 1659 aa-0.4□□□□□ -2.47
TRAPPC11-210ENST00000513600 VPS13DQ5THJ4 4388 aa-0.41□□□□□ -2.47
TRAPPC11-210ENST00000513600 C5orf42Q9H799 3197 aa-0.41□□□□□ -2.47
TRAPPC11-210ENST00000513600 ACACBO00763 2458 aa-0.41□□□□□ -2.47
TRAPPC11-210ENST00000513600 AKAP12Q02952 1782 aa-0.41□□□□□ -2.47
TRAPPC11-210ENST00000513600 LRRC7Q96NW7 1537 aa-0.41□□□□□ -2.48
TRAPPC11-210ENST00000513600 NDUFA3O95167 84 aa-0.41□□□□□ -2.48
TRAPPC11-210ENST00000513600 DEFA5Q01523 94 aa-0.41□□□□□ -2.48
TRAPPC11-210ENST00000513600 VPS13BQ7Z7G8 4022 aa-0.41□□□□□ -2.48
TRAPPC11-210ENST00000513600 DMXL2Q8TDJ6 3036 aa-0.41□□□□□ -2.48
TRAPPC11-210ENST00000513600 RGPD1P0DJD0 1748 aa-0.41□□□□□ -2.48
TRAPPC11-210ENST00000513600 MYO3AQ8NEV4 1616 aa-0.42□□□□□ -2.48
TRAPPC11-210ENST00000513600 LRBAP50851 2863 aa-0.42□□□□□ -2.48
TRAPPC11-210ENST00000513600 CCNB3Q8WWL7 1395 aa-0.42□□□□□ -2.48
TRAPPC11-210ENST00000513600 BOD1L1Q8NFC6 3051 aa-0.42□□□□□ -2.48
TRAPPC11-210ENST00000513600 TRAV21A0A0B4J279 112 aa-0.42□□□□□ -2.48
TRAPPC11-210ENST00000513600 MYMXA0A1B0GTQ4 84 aa-0.42□□□□□ -2.48
TRAPPC11-210ENST00000513600 LYSTQ99698 3801 aa-0.42□□□□□ -2.48
TRAPPC11-210ENST00000513600 PLIN4Q96Q06 1357 aa-0.43□□□□□ -2.48
TRAPPC11-210ENST00000513600 MYO15AQ9UKN7 3530 aa-0.43□□□□□ -2.48
TRAPPC11-210ENST00000513600 FRYQ5TBA9 3013 aa-0.43□□□□□ -2.48
TRAPPC11-210ENST00000513600 MT1BP07438 61 aa-0.43□□□□□ -2.48
TRAPPC11-210ENST00000513600 SNRPFP62306 86 aaKnown RBP-0.43□□□□□ -2.48
TRAPPC11-210ENST00000513600 SPRR2FQ96RM1 72 aa-0.43□□□□□ -2.48
TRAPPC11-210ENST00000513600 Q9H521 79 aa-0.43□□□□□ -2.48
TRAPPC11-210ENST00000513600 V9GYS6 101 aa-0.43□□□□□ -2.48
TRAPPC11-210ENST00000513600 SPTAN1Q13813 2472 aaKnown RBP-0.43□□□□□ -2.48
TRAPPC11-210ENST00000513600 DYNC1H1Q14204 4646 aaKnown RBP-0.43□□□□□ -2.48
TRAPPC11-210ENST00000513600 SMG1Q96Q15 3661 aaKnown RBP-0.43□□□□□ -2.48
TRAPPC11-210ENST00000513600 UBR1Q8IWV7 1749 aa-0.44□□□□□ -2.48
TRAPPC11-210ENST00000513600 RGPD4Q7Z3J3 1758 aa-0.44□□□□□ -2.48
TRAPPC11-210ENST00000513600 TLN2Q9Y4G6 2542 aa-0.44□□□□□ -2.48
TRAPPC11-210ENST00000513600 PRUNE2Q8WUY3 3088 aa-0.44□□□□□ -2.48
TRAPPC11-210ENST00000513600 K7EP34 96 aa-0.44□□□□□ -2.48
TRAPPC11-210ENST00000513600 C3orf79P0CE67 100 aa-0.44□□□□□ -2.48
TRAPPC11-210ENST00000513600 MT1HP80294 61 aa-0.44□□□□□ -2.48
TRAPPC11-210ENST00000513600 LINC00643Q86TS7 51 aa-0.44□□□□□ -2.48
TRAPPC11-210ENST00000513600 S100A16Q96FQ6 103 aaKnown RBP-0.44□□□□□ -2.48
TRAPPC11-210ENST00000513600 RABAC1Q9UI14 185 aa-0.44□□□□□ -2.48
TRAPPC11-210ENST00000513600 RELNP78509 3460 aa-0.44□□□□□ -2.48
TRAPPC11-210ENST00000513600 RGPD3A6NKT7 1758 aaPredicted RBP-0.45□□□□□ -2.48
TRAPPC11-210ENST00000513600 EYSQ5T1H1 3165 aa-0.45□□□□□ -2.48
TRAPPC11-210ENST00000513600 PVALEFA0A1B0GWK0 134 aa-0.45□□□□□ -2.48
TRAPPC11-210ENST00000513600 CEBPZOSA8MTT3 80 aa-0.45□□□□□ -2.48
TRAPPC11-210ENST00000513600 NDUFB1O75438 58 aa-0.45□□□□□ -2.48
TRAPPC11-210ENST00000513600 MT1AP04731 61 aa-0.45□□□□□ -2.48
TRAPPC11-210ENST00000513600 WFDC9Q8NEX5 89 aa-0.45□□□□□ -2.48
TRAPPC11-210ENST00000513600 SUPT6HQ7KZ85 1726 aaKnown RBP-0.45□□□□□ -2.48
TRAPPC11-210ENST00000513600 TIAM2Q8IVF5 1701 aa-0.45□□□□□ -2.48
TRAPPC11-210ENST00000513600 SACSQ9NZJ4 4579 aa-0.45□□□□□ -2.48
TRAPPC11-210ENST00000513600 CMYA5Q8N3K9 4069 aa-0.45□□□□□ -2.48
TRAPPC11-210ENST00000513600 USP32Q8NFA0 1604 aa-0.46□□□□□ -2.48
TRAPPC11-210ENST00000513600 DNAH1Q9P2D7 4330 aa-0.46□□□□□ -2.48
TRAPPC11-210ENST00000513600 C4AP0C0L4 1744 aa-0.46□□□□□ -2.48
TRAPPC11-210ENST00000513600 C4BP0C0L5 1744 aa-0.46□□□□□ -2.48
TRAPPC11-210ENST00000513600 DNAH11Q96DT5 4516 aa-0.46□□□□□ -2.48
TRAPPC11-210ENST00000513600 BPTFQ12830 3046 aa-0.46□□□□□ -2.48
TRAPPC11-210ENST00000513600 ACYP1P07311 99 aa-0.46□□□□□ -2.48
TRAPPC11-210ENST00000513600 MT1XP80297 61 aa-0.46□□□□□ -2.48
TRAPPC11-210ENST00000513600 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.46□□□□□ -2.48
TRAPPC11-210ENST00000513600 APOBP04114 4563 aaKnown RBP-0.46□□□□□ -2.48
TRAPPC11-210ENST00000513600 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.46□□□□□ -2.48
TRAPPC11-210ENST00000513600 ADGRG4Q8IZF6 3080 aa-0.46□□□□□ -2.48
TRAPPC11-210ENST00000513600 DNAH7Q8WXX0 4024 aa-0.47□□□□□ -2.48
TRAPPC11-210ENST00000513600 LTN1O94822 1766 aa-0.47□□□□□ -2.48
TRAPPC11-210ENST00000513600 ZFHX4Q86UP3 3567 aa-0.47□□□□□ -2.48
TRAPPC11-210ENST00000513600 ABCC3O15438 1527 aa-0.47□□□□□ -2.48
TRAPPC11-210ENST00000513600 MT1MQ8N339 61 aa-0.47□□□□□ -2.48
TRAPPC11-210ENST00000513600 PRO3102Q9H379 93 aa-0.47□□□□□ -2.48
TRAPPC11-210ENST00000513600 DNAH5Q8TE73 4624 aa-0.47□□□□□ -2.48
TRAPPC11-210ENST00000513600 POLR1AO95602 1720 aaPredicted RBP-0.47□□□□□ -2.49
TRAPPC11-210ENST00000513600 CSMD1Q96PZ7 3565 aa-0.47□□□□□ -2.49
TRAPPC11-210ENST00000513600 NWD1Q149M9 1564 aa-0.48□□□□□ -2.49
TRAPPC11-210ENST00000513600 TTC37Q6PGP7 1564 aa-0.48□□□□□ -2.49
TRAPPC11-210ENST00000513600 TMEM131LA2VDJ0 1609 aa-0.48□□□□□ -2.49
TRAPPC11-210ENST00000513600 SPTBN5Q9NRC6 3674 aaKnown RBP-0.48□□□□□ -2.49
TRAPPC11-210ENST00000513600 WIZO95785 1651 aa-0.48□□□□□ -2.49
TRAPPC11-210ENST00000513600 LCE6AA0A183 80 aa-0.48□□□□□ -2.49
TRAPPC11-210ENST00000513600 C9orf92A6NGG3 77 aa-0.48□□□□□ -2.49
TRAPPC11-210ENST00000513600 H3BNG1 76 aa-0.48□□□□□ -2.49
TRAPPC11-210ENST00000513600 MT2AP02795 61 aa-0.48□□□□□ -2.49
TRAPPC11-210ENST00000513600 LINC00158P58513 81 aa-0.48□□□□□ -2.49
TRAPPC11-210ENST00000513600 NCOA2Q15596 1464 aa-0.48□□□□□ -2.49
TRAPPC11-210ENST00000513600 URB2Q14146 1524 aaKnown RBP-0.48□□□□□ -2.49
TRAPPC11-210ENST00000513600 PLXNC1O60486 1568 aa-0.49□□□□□ -2.49
TRAPPC11-210ENST00000513600 SPENQ96T58 3664 aaKnown RBP-0.49□□□□□ -2.49
TRAPPC11-210ENST00000513600 DOT1LQ8TEK3 1739 aa-0.5□□□□□ -2.49
TRAPPC11-210ENST00000513600 PPLO60437 1756 aa-0.5□□□□□ -2.49
TRAPPC11-210ENST00000513600 TRRAPQ9Y4A5 3859 aa-0.5□□□□□ -2.49
TRAPPC11-210ENST00000513600 KANTRA0A1W2PQU2 76 aa-0.5□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms