RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 CLEC2BQ92478 149 aa12.22□□□□□ -0.45
NEIL3-202ENST00000513321 A0A1B0GX51 115 aa12.21□□□□□ -0.46
NEIL3-202ENST00000513321 SCGB1C2P0DMR2 95 aa12.19□□□□□ -0.46
NEIL3-202ENST00000513321 C4orf48Q5BLP8 95 aa12.17□□□□□ -0.46
NEIL3-202ENST00000513321 SPAG11AQ6PDA7 123 aa12.17□□□□□ -0.46
NEIL3-202ENST00000513321 OCIAD2Q56VL3 154 aa12.16□□□□□ -0.46
NEIL3-202ENST00000513321 PPDPFLQ8WWR9 84 aa12.15□□□□□ -0.46
NEIL3-202ENST00000513321 NAA38Q9BRA0 125 aaKnown RBP12.15□□□□□ -0.46
NEIL3-202ENST00000513321 SNHG12Q9BXW3 62 aa12.12□□□□□ -0.47
NEIL3-202ENST00000513321 F8WEM9 126 aa12.11□□□□□ -0.47
NEIL3-202ENST00000513321 DNAL4O96015 105 aa12.11□□□□□ -0.47
NEIL3-202ENST00000513321 SPINK1P00995 79 aa12.1□□□□□ -0.47
NEIL3-202ENST00000513321 GHRHP01286 108 aa12.09□□□□□ -0.47
NEIL3-202ENST00000513321 LST1O00453 97 aa12.08□□□□□ -0.48
NEIL3-202ENST00000513321 TRACP01848 142 aa12.07□□□□□ -0.48
NEIL3-202ENST00000513321 FABP2P12104 132 aa12.06□□□□□ -0.48
NEIL3-202ENST00000513321 A0A0G2JQZ4 141 aa12.06□□□□□ -0.48
NEIL3-202ENST00000513321 H3BUT2 72 aa12.06□□□□□ -0.48
NEIL3-202ENST00000513321 ORMDL1Q9P0S3 153 aa12.06□□□□□ -0.48
NEIL3-202ENST00000513321 TAX1BP3O14907 124 aa12.05□□□□□ -0.48
NEIL3-202ENST00000513321 NDUFV3P56181 108 aaKnown RBP12.04□□□□□ -0.48
NEIL3-202ENST00000513321 HRCT1Q6UXD1 115 aa12.04□□□□□ -0.48
NEIL3-202ENST00000513321 IGLV8-61A0A075B6I0 122 aa12.03□□□□□ -0.48
NEIL3-202ENST00000513321 C9orf118A6NHY6 69 aa12.03□□□□□ -0.48
NEIL3-202ENST00000513321 TCL1BO95988 128 aa12.03□□□□□ -0.48
NEIL3-202ENST00000513321 H3BQ85 93 aa12.01□□□□□ -0.49
NEIL3-202ENST00000513321 RPS29P62273 56 aaKnown RBP12.01□□□□□ -0.49
NEIL3-202ENST00000513321 CD164Q04900 197 aa12.01□□□□□ -0.49
NEIL3-202ENST00000513321 ATXN8Q156A1 80 aa12.01□□□□□ -0.49
NEIL3-202ENST00000513321 LYRM7Q5U5X0 104 aa12.01□□□□□ -0.49
NEIL3-202ENST00000513321 Q6JHZ5 121 aa12.01□□□□□ -0.49
NEIL3-202ENST00000513321 RETNLBQ9BQ08 111 aa12.01□□□□□ -0.49
NEIL3-202ENST00000513321 HMCN2Q8NDA2 5059 aa12□□□□□ -0.49
NEIL3-202ENST00000513321 TMEM256-PLSCR3K7ERE1 68 aa12□□□□□ -0.49
NEIL3-202ENST00000513321 PRR4Q16378 134 aa12□□□□□ -0.49
NEIL3-202ENST00000513321 IGFL1Q6UW32 110 aa11.98□□□□□ -0.49
NEIL3-202ENST00000513321 H3BMG7 143 aa11.97□□□□□ -0.49
NEIL3-202ENST00000513321 COL5A1-AS1Q5SY13 56 aa11.97□□□□□ -0.49
NEIL3-202ENST00000513321 TRBV20-1A0A075B6N2 111 aa11.96□□□□□ -0.5
NEIL3-202ENST00000513321 A0A1W2PPM0 123 aa11.96□□□□□ -0.5
NEIL3-202ENST00000513321 BAALC-AS2P0C853 105 aa11.95□□□□□ -0.5
NEIL3-202ENST00000513321 UBE2V1Q13404 147 aa11.93□□□□□ -0.5
NEIL3-202ENST00000513321 LIMD2Q9BT23 127 aa11.92□□□□□ -0.5
NEIL3-202ENST00000513321 A0A1B0GV72 72 aa11.89□□□□□ -0.51
NEIL3-202ENST00000513321 ANKRD29Q8N6D5 301 aa11.88□□□□□ -0.51
NEIL3-202ENST00000513321 IGLV7-46A0A075B6I9 117 aa11.86□□□□□ -0.51
NEIL3-202ENST00000513321 Q5XG85 94 aa11.86□□□□□ -0.51
NEIL3-202ENST00000513321 TRBV7-7A0A0K0K1E9 115 aa11.86□□□□□ -0.51
NEIL3-202ENST00000513321 C9JAW5 83 aa11.86□□□□□ -0.51
NEIL3-202ENST00000513321 FP248Q71RG6 208 aaPredicted RBP11.86□□□□□ -0.51
NEIL3-202ENST00000513321 TEN1Q86WV5 123 aa11.83□□□□□ -0.52
NEIL3-202ENST00000513321 SPCS1Q9Y6A9 102 aa11.83□□□□□ -0.52
NEIL3-202ENST00000513321 Q6Q795 121 aa11.82□□□□□ -0.52
NEIL3-202ENST00000513321 RBM3P98179 157 aaKnown RBP11.81□□□□□ -0.52
NEIL3-202ENST00000513321 A0A1W2PNM2 257 aa11.8□□□□□ -0.52
NEIL3-202ENST00000513321 C1orf195Q5TG92 126 aa11.78□□□□□ -0.52
NEIL3-202ENST00000513321 LPAP08519 4548 aa11.77□□□□□ -0.52
NEIL3-202ENST00000513321 TRBV7-4A0A0J9YYF1 115 aa11.76□□□□□ -0.53
NEIL3-202ENST00000513321 MTURNQ8N3F0 131 aa11.76□□□□□ -0.53
NEIL3-202ENST00000513321 DSCR8Q96T75 97 aa11.76□□□□□ -0.53
NEIL3-202ENST00000513321 LRP2P98164 4655 aa11.75□□□□□ -0.53
NEIL3-202ENST00000513321 JMJD7-PLA2G4BH0Y9G9 81 aa11.75□□□□□ -0.53
NEIL3-202ENST00000513321 TPRXLQ17RH7 258 aa11.75□□□□□ -0.53
NEIL3-202ENST00000513321 ASB16-AS1Q495Z4 193 aa11.75□□□□□ -0.53
NEIL3-202ENST00000513321 H3BT86 120 aa11.74□□□□□ -0.53
NEIL3-202ENST00000513321 CCKP06307 115 aa11.74□□□□□ -0.53
NEIL3-202ENST00000513321 A0A087WSZ3 146 aa11.73□□□□□ -0.53
NEIL3-202ENST00000513321 K7EP34 96 aa11.71□□□□□ -0.53
NEIL3-202ENST00000513321 SS18L2Q9UHA2 77 aa11.7□□□□□ -0.54
NEIL3-202ENST00000513321 KRTAP13-3Q3SY46 172 aa11.7□□□□□ -0.54
NEIL3-202ENST00000513321 VPS25Q9BRG1 176 aa11.7□□□□□ -0.54
NEIL3-202ENST00000513321 OBSCN-AS1Q96MR7 158 aa11.69□□□□□ -0.54
NEIL3-202ENST00000513321 CDIP1Q9H305 208 aa11.68□□□□□ -0.54
NEIL3-202ENST00000513321 C14orf132Q9NPU4 83 aa11.66□□□□□ -0.54
NEIL3-202ENST00000513321 LOC110117498A0A087WWA1 95 aa11.65□□□□□ -0.54
NEIL3-202ENST00000513321 A0A1B0GV90 55 aa11.65□□□□□ -0.55
NEIL3-202ENST00000513321 SMCPP49901 116 aaPredicted RBP11.65□□□□□ -0.55
NEIL3-202ENST00000513321 Q6ZQT0 140 aa11.65□□□□□ -0.55
NEIL3-202ENST00000513321 GTF2H5Q6ZYL4 71 aa11.65□□□□□ -0.55
NEIL3-202ENST00000513321 PDE6GP18545 87 aa11.64□□□□□ -0.55
NEIL3-202ENST00000513321 PRO0461Q9UI25 63 aa11.62□□□□□ -0.55
NEIL3-202ENST00000513321 Q96NJ1 140 aa11.59□□□□□ -0.55
NEIL3-202ENST00000513321 UBR4Q5T4S7 5183 aa11.59□□□□□ -0.55
NEIL3-202ENST00000513321 C9orf92A6NGG3 77 aa11.57□□□□□ -0.56
NEIL3-202ENST00000513321 C21orf62-AS1Q17RA5 79 aa11.55□□□□□ -0.56
NEIL3-202ENST00000513321 A0A1B0GW54 56 aa11.54□□□□□ -0.56
NEIL3-202ENST00000513321 LINC00472Q9H8W2 130 aa11.53□□□□□ -0.56
NEIL3-202ENST00000513321 F8W1H4 67 aa11.52□□□□□ -0.57
NEIL3-202ENST00000513321 XP32Q5T750 250 aa11.51□□□□□ -0.57
NEIL3-202ENST00000513321 DEFB116Q30KQ4 102 aa11.5□□□□□ -0.57
NEIL3-202ENST00000513321 IGKV4-1P06312 121 aa11.5□□□□□ -0.57
NEIL3-202ENST00000513321 SIGMAR1Q99720 223 aa11.48□□□□□ -0.57
NEIL3-202ENST00000513321 ETDBQ3ZM63 59 aa11.41□□□□□ -0.58
NEIL3-202ENST00000513321 NREPQ16612 68 aa11.4□□□□□ -0.58
NEIL3-202ENST00000513321 J3KT08 172 aa11.39□□□□□ -0.59
NEIL3-202ENST00000513321 SEC61BP60468 96 aaKnown RBP11.38□□□□□ -0.59
NEIL3-202ENST00000513321 DSCR10P59022 87 aa11.35□□□□□ -0.59
NEIL3-202ENST00000513321 MUC17Q685J3 4493 aa11.34□□□□□ -0.59
NEIL3-202ENST00000513321 IGHV6-1A0A0B4J1U7 121 aa11.33□□□□□ -0.6
NEIL3-202ENST00000513321 LINC00313P59037 77 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms