RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 BRK1Q8WUW1 75 aa8.38□□□□□ -1.07
PCDHA4-202ENST00000512229 C1orf64Q8NEQ6 169 aa8.37□□□□□ -1.07
PCDHA4-202ENST00000512229 TYMSOSQ8TAI1 123 aa8.37□□□□□ -1.07
PCDHA4-202ENST00000512229 RETNLBQ9BQ08 111 aa8.37□□□□□ -1.07
PCDHA4-202ENST00000512229 TP53AIP1Q9HCN2 124 aa8.36□□□□□ -1.07
PCDHA4-202ENST00000512229 PSORS1C2Q9UIG4 136 aa8.36□□□□□ -1.07
PCDHA4-202ENST00000512229 A0A0G2JQZ4 141 aa8.36□□□□□ -1.07
PCDHA4-202ENST00000512229 Q8NDZ9 215 aa8.36□□□□□ -1.07
PCDHA4-202ENST00000512229 K7EQZ3 153 aa8.35□□□□□ -1.07
PCDHA4-202ENST00000512229 FAM229AH3BQW9 127 aa8.34□□□□□ -1.07
PCDHA4-202ENST00000512229 PLA2G1BP04054 148 aaKnown RBP8.34□□□□□ -1.07
PCDHA4-202ENST00000512229 OBSCN-AS1Q96MR7 158 aa8.34□□□□□ -1.07
PCDHA4-202ENST00000512229 ZFHX3Q15911 3703 aa8.33□□□□□ -1.08
PCDHA4-202ENST00000512229 A0A1W2PNM2 257 aa8.33□□□□□ -1.08
PCDHA4-202ENST00000512229 A8MWP4 228 aa8.33□□□□□ -1.08
PCDHA4-202ENST00000512229 IGLV5-48A0A075B6I7 105 aa8.32□□□□□ -1.08
PCDHA4-202ENST00000512229 KRTAP26-1Q6PEX3 210 aa8.32□□□□□ -1.08
PCDHA4-202ENST00000512229 SSBP3-AS1Q7Z2R9 100 aa8.32□□□□□ -1.08
PCDHA4-202ENST00000512229 TNP2Q05952 138 aa8.31□□□□□ -1.08
PCDHA4-202ENST00000512229 ANAPC11Q9NYG5 84 aa8.3□□□□□ -1.08
PCDHA4-202ENST00000512229 IGLV7-43P04211 117 aa8.3□□□□□ -1.08
PCDHA4-202ENST00000512229 TRAV22A0A0B4J277 110 aa8.29□□□□□ -1.08
PCDHA4-202ENST00000512229 KRTAP1-5Q9BYS1 174 aa8.29□□□□□ -1.08
PCDHA4-202ENST00000512229 SPRR4Q96PI1 79 aa8.29□□□□□ -1.08
PCDHA4-202ENST00000512229 NBPF19A0A087WUL8 3843 aa8.29□□□□□ -1.08
PCDHA4-202ENST00000512229 LINC00313P59037 77 aa8.28□□□□□ -1.08
PCDHA4-202ENST00000512229 BSNQ9UPA5 3926 aa8.28□□□□□ -1.08
PCDHA4-202ENST00000512229 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.27□□□□□ -1.09
PCDHA4-202ENST00000512229 IGKV2D-30A0A075B6S6 120 aa8.27□□□□□ -1.09
PCDHA4-202ENST00000512229 IGKV2-30P06310 120 aa8.27□□□□□ -1.09
PCDHA4-202ENST00000512229 PRR15Q8IV56 129 aa8.27□□□□□ -1.09
PCDHA4-202ENST00000512229 H3BPC8 53 aa8.26□□□□□ -1.09
PCDHA4-202ENST00000512229 PRR15LQ9BU68 103 aa8.26□□□□□ -1.09
PCDHA4-202ENST00000512229 FBN1P35555 2871 aaKnown RBP8.25□□□□□ -1.09
PCDHA4-202ENST00000512229 SPTSSBQ8NFR3 76 aa8.25□□□□□ -1.09
PCDHA4-202ENST00000512229 LINC00336Q6ZUF6 198 aa8.25□□□□□ -1.09
PCDHA4-202ENST00000512229 OTOGQ6ZRI0 2925 aa8.25□□□□□ -1.09
PCDHA4-202ENST00000512229 SMR3BP02814 79 aaPredicted RBP8.24□□□□□ -1.09
PCDHA4-202ENST00000512229 SPRR1AP35321 89 aa8.24□□□□□ -1.09
PCDHA4-202ENST00000512229 A6NED7 52 aa8.23□□□□□ -1.09
PCDHA4-202ENST00000512229 MRPL34Q9BQ48 92 aaKnown RBP8.22□□□□□ -1.09
PCDHA4-202ENST00000512229 C8orf87E5RJ46 101 aa8.21□□□□□ -1.1
PCDHA4-202ENST00000512229 TENM1Q9UKZ4 2725 aa8.2□□□□□ -1.1
PCDHA4-202ENST00000512229 C8orf17Q9NRJ1 99 aa8.19□□□□□ -1.1
PCDHA4-202ENST00000512229 RPS28P62857 69 aaKnown RBP8.19□□□□□ -1.1
PCDHA4-202ENST00000512229 A0A0U1RQV1 116 aa8.18□□□□□ -1.1
PCDHA4-202ENST00000512229 A0A1B0GVX0 72 aa8.18□□□□□ -1.1
PCDHA4-202ENST00000512229 SPINK1P00995 79 aa8.17□□□□□ -1.1
PCDHA4-202ENST00000512229 KLKP1Q107X0 134 aa8.17□□□□□ -1.1
PCDHA4-202ENST00000512229 VWFP04275 2813 aa8.16□□□□□ -1.1
PCDHA4-202ENST00000512229 LINC00304Q8N9R0 145 aa8.16□□□□□ -1.1
PCDHA4-202ENST00000512229 Q96NJ1 140 aa8.16□□□□□ -1.1
PCDHA4-202ENST00000512229 PSPHP1O15172 72 aa8.16□□□□□ -1.1
PCDHA4-202ENST00000512229 SPAG11AQ6PDA7 123 aa8.15□□□□□ -1.1
PCDHA4-202ENST00000512229 PLAC8Q9NZF1 115 aa8.14□□□□□ -1.11
PCDHA4-202ENST00000512229 LOC101927531A0A1B0GV80 90 aa8.13□□□□□ -1.11
PCDHA4-202ENST00000512229 DSCR10P59022 87 aa8.12□□□□□ -1.11
PCDHA4-202ENST00000512229 ACYP2P14621 99 aa8.12□□□□□ -1.11
PCDHA4-202ENST00000512229 K7ERS5 55 aa8.1□□□□□ -1.11
PCDHA4-202ENST00000512229 PDZD2O15018 2839 aa8.1□□□□□ -1.11
PCDHA4-202ENST00000512229 C7orf65Q6ZTY9 151 aa8.1□□□□□ -1.11
PCDHA4-202ENST00000512229 H7BZZ5 65 aa8.07□□□□□ -1.12
PCDHA4-202ENST00000512229 SPRR1BP22528 89 aa8.07□□□□□ -1.12
PCDHA4-202ENST00000512229 CD164Q04900 197 aa8.04□□□□□ -1.12
PCDHA4-202ENST00000512229 VPS13CQ709C8 3753 aa8.04□□□□□ -1.12
PCDHA4-202ENST00000512229 OCR1Q9BZK8 76 aa8.03□□□□□ -1.12
PCDHA4-202ENST00000512229 Q6ZR54 194 aa8.03□□□□□ -1.12
PCDHA4-202ENST00000512229 KRTAP4-16G5E9R7 235 aaPredicted RBP8.03□□□□□ -1.12
PCDHA4-202ENST00000512229 IGLV8-61A0A075B6I0 122 aa8.02□□□□□ -1.13
PCDHA4-202ENST00000512229 ATP11AUNQ6ZP68 121 aa8.02□□□□□ -1.13
PCDHA4-202ENST00000512229 PKD1L1Q8TDX9 2849 aa8.02□□□□□ -1.13
PCDHA4-202ENST00000512229 PANO1I0J062 215 aa8.01□□□□□ -1.13
PCDHA4-202ENST00000512229 FAM229BQ4G0N7 80 aa8□□□□□ -1.13
PCDHA4-202ENST00000512229 TENM3Q9P273 2699 aa8□□□□□ -1.13
PCDHA4-202ENST00000512229 SVIPQ8NHG7 77 aa8□□□□□ -1.13
PCDHA4-202ENST00000512229 KRTAP10-2P60368 255 aa7.99□□□□□ -1.13
PCDHA4-202ENST00000512229 C4orf26Q17RF5 130 aa7.99□□□□□ -1.13
PCDHA4-202ENST00000512229 C9orf92A6NGG3 77 aa7.98□□□□□ -1.13
PCDHA4-202ENST00000512229 DMBT1Q9UGM3 2413 aaPredicted RBP7.98□□□□□ -1.13
PCDHA4-202ENST00000512229 A0A1B0GU69 56 aa7.98□□□□□ -1.13
PCDHA4-202ENST00000512229 PRR26Q8N8Z3 221 aa7.98□□□□□ -1.13
PCDHA4-202ENST00000512229 PMAIP1Q13794 54 aa7.96□□□□□ -1.13
PCDHA4-202ENST00000512229 KRTAP10-1P60331 282 aa7.96□□□□□ -1.14
PCDHA4-202ENST00000512229 COA5Q86WW8 74 aa7.96□□□□□ -1.14
PCDHA4-202ENST00000512229 J3QL48 77 aa7.94□□□□□ -1.14
PCDHA4-202ENST00000512229 Q6ZRN7 208 aaPredicted RBP7.94□□□□□ -1.14
PCDHA4-202ENST00000512229 LINC00472Q9H8W2 130 aa7.94□□□□□ -1.14
PCDHA4-202ENST00000512229 LCE6AA0A183 80 aa7.94□□□□□ -1.14
PCDHA4-202ENST00000512229 C1orf195Q5TG92 126 aa7.91□□□□□ -1.14
PCDHA4-202ENST00000512229 MMP24-AS1A0A0U1RRL7 71 aa7.89□□□□□ -1.15
PCDHA4-202ENST00000512229 KRTAP7-1Q8IUC3 87 aa7.89□□□□□ -1.15
PCDHA4-202ENST00000512229 SPANXA2-OT1Q8N9U9 137 aa7.89□□□□□ -1.15
PCDHA4-202ENST00000512229 PRO0628Q9UI54 55 aa7.87□□□□□ -1.15
PCDHA4-202ENST00000512229 A8MUN3 132 aa7.87□□□□□ -1.15
PCDHA4-202ENST00000512229 KRTAP11-1Q8IUC1 163 aa7.86□□□□□ -1.15
PCDHA4-202ENST00000512229 LINC00483Q53H64 154 aa7.85□□□□□ -1.15
PCDHA4-202ENST00000512229 TENM2Q9NT68 2774 aa7.85□□□□□ -1.15
PCDHA4-202ENST00000512229 KRTAP21-3Q3LHN1 58 aa7.84□□□□□ -1.15
PCDHA4-202ENST00000512229 CYSTM1Q9H1C7 97 aa7.81□□□□□ -1.16
PCDHA4-202ENST00000512229 TGP01266 2768 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms