RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 ATXN8Q156A1 80 aa5.26□□□□□ -1.57
NUP54-211ENST00000512151 H7C2G1 150 aa5.25□□□□□ -1.57
NUP54-211ENST00000512151 ETDBQ3ZM63 59 aa5.25□□□□□ -1.57
NUP54-211ENST00000512151 KRTAP19-4Q3LI73 84 aa5.24□□□□□ -1.57
NUP54-211ENST00000512151 MTURNQ8N3F0 131 aa5.24□□□□□ -1.57
NUP54-211ENST00000512151 USH2AO75445 5202 aa5.24□□□□□ -1.57
NUP54-211ENST00000512151 TRAV13-2A0A0B4J235 113 aa5.23□□□□□ -1.57
NUP54-211ENST00000512151 FAM19A5Q7Z5A7 132 aaPredicted RBP5.23□□□□□ -1.57
NUP54-211ENST00000512151 TEN1Q86WV5 123 aa5.23□□□□□ -1.57
NUP54-211ENST00000512151 TYMSOSQ8TAI1 123 aa5.23□□□□□ -1.57
NUP54-211ENST00000512151 VPS25Q9BRG1 176 aa5.23□□□□□ -1.57
NUP54-211ENST00000512151 TRBV10-2A0A0K0K1G8 114 aa5.22□□□□□ -1.57
NUP54-211ENST00000512151 LST1O00453 97 aa5.22□□□□□ -1.57
NUP54-211ENST00000512151 SLC25A20O43772 301 aa5.22□□□□□ -1.57
NUP54-211ENST00000512151 VPREB1P12018 145 aa5.22□□□□□ -1.57
NUP54-211ENST00000512151 KRTAP13-2Q52LG2 175 aa5.22□□□□□ -1.57
NUP54-211ENST00000512151 ANAPC11Q9NYG5 84 aa5.22□□□□□ -1.57
NUP54-211ENST00000512151 C22orf24Q9Y442 160 aa5.22□□□□□ -1.57
NUP54-211ENST00000512151 FCGBPQ9Y6R7 5405 aaPredicted RBP5.22□□□□□ -1.57
NUP54-211ENST00000512151 IGLV5-37A0A075B6J1 123 aa5.21□□□□□ -1.58
NUP54-211ENST00000512151 C9JAW5 83 aa5.21□□□□□ -1.58
NUP54-211ENST00000512151 PPDPFLQ8WWR9 84 aa5.21□□□□□ -1.58
NUP54-211ENST00000512151 IGKV2-28A0A075B6P5 120 aa5.2□□□□□ -1.58
NUP54-211ENST00000512151 H3BT86 120 aa5.2□□□□□ -1.58
NUP54-211ENST00000512151 ZNF861PO60384 105 aa5.2□□□□□ -1.58
NUP54-211ENST00000512151 IGKV2D-28P01615 120 aa5.2□□□□□ -1.58
NUP54-211ENST00000512151 ANKRD29Q8N6D5 301 aa5.2□□□□□ -1.58
NUP54-211ENST00000512151 RPL28P46779 137 aaKnown RBP5.19□□□□□ -1.58
NUP54-211ENST00000512151 LINC00337Q8N6G1 96 aa5.19□□□□□ -1.58
NUP54-211ENST00000512151 CLEC2BQ92478 149 aa5.19□□□□□ -1.58
NUP54-211ENST00000512151 LINC00167Q96N53 147 aa5.19□□□□□ -1.58
NUP54-211ENST00000512151 NCR3O14931 201 aa5.18□□□□□ -1.58
NUP54-211ENST00000512151 NDUFC2O95298 119 aa5.18□□□□□ -1.58
NUP54-211ENST00000512151 UBE2BP63146 152 aa5.18□□□□□ -1.58
NUP54-211ENST00000512151 KRTAP13-3Q3SY46 172 aa5.18□□□□□ -1.58
NUP54-211ENST00000512151 RPL37AP8A6NKH3 93 aa5.17□□□□□ -1.58
NUP54-211ENST00000512151 TRACP01848 142 aa5.17□□□□□ -1.58
NUP54-211ENST00000512151 MRPL55Q7Z7F7 128 aaKnown RBP5.17□□□□□ -1.58
NUP54-211ENST00000512151 LINC00304Q8N9R0 145 aa5.17□□□□□ -1.58
NUP54-211ENST00000512151 H0YGX0 51 aa5.16□□□□□ -1.58
NUP54-211ENST00000512151 M0R378 163 aa5.16□□□□□ -1.58
NUP54-211ENST00000512151 NKAPP1Q8N9T2 125 aa5.16□□□□□ -1.58
NUP54-211ENST00000512151 A0A1B0GX51 115 aa5.16□□□□□ -1.58
NUP54-211ENST00000512151 SEC61BP60468 96 aaKnown RBP5.16□□□□□ -1.58
NUP54-211ENST00000512151 SMIM11BQ8TCY0 68 aa5.16□□□□□ -1.58
NUP54-211ENST00000512151 TRBV10-3A0A0K0K1G6 114 aa5.14□□□□□ -1.59
NUP54-211ENST00000512151 FAM218AQ96MZ4 157 aa5.14□□□□□ -1.59
NUP54-211ENST00000512151 SNCGO76070 127 aa5.13□□□□□ -1.59
NUP54-211ENST00000512151 IGLV6-57P01721 117 aa5.13□□□□□ -1.59
NUP54-211ENST00000512151 SCGB1A1P11684 91 aa5.13□□□□□ -1.59
NUP54-211ENST00000512151 PCP4P48539 62 aa5.13□□□□□ -1.59
NUP54-211ENST00000512151 OR13C6PQ8NH95 151 aa5.13□□□□□ -1.59
NUP54-211ENST00000512151 SIGMAR1Q99720 223 aa5.13□□□□□ -1.59
NUP54-211ENST00000512151 TMEM126AQ9H061 195 aa5.13□□□□□ -1.59
NUP54-211ENST00000512151 TEX49A0A1B0GTD5 131 aa5.12□□□□□ -1.59
NUP54-211ENST00000512151 FAM240AA0A1B0GVK7 77 aa5.12□□□□□ -1.59
NUP54-211ENST00000512151 KCNQ1DNQ9H478 68 aa5.12□□□□□ -1.59
NUP54-211ENST00000512151 H3BQ85 93 aa5.11□□□□□ -1.59
NUP54-211ENST00000512151 BAALC-AS2P0C853 105 aa5.11□□□□□ -1.59
NUP54-211ENST00000512151 SPRR1AP35321 89 aa5.11□□□□□ -1.59
NUP54-211ENST00000512151 S100A7L2Q5SY68 101 aa5.11□□□□□ -1.59
NUP54-211ENST00000512151 FLGP20930 4061 aaPredicted RBP5.1□□□□□ -1.59
NUP54-211ENST00000512151 KRTAP4-16G5E9R7 235 aaPredicted RBP5.1□□□□□ -1.59
NUP54-211ENST00000512151 PRYO14603 147 aa5.1□□□□□ -1.59
NUP54-211ENST00000512151 ACYP1P07311 99 aa5.1□□□□□ -1.59
NUP54-211ENST00000512151 TRAV23DV6A0A075B6W5 121 aa5.09□□□□□ -1.59
NUP54-211ENST00000512151 BCE1O60756 84 aa5.09□□□□□ -1.59
NUP54-211ENST00000512151 FP248Q71RG6 208 aaPredicted RBP5.09□□□□□ -1.59
NUP54-211ENST00000512151 DNAL4O96015 105 aa5.08□□□□□ -1.6
NUP54-211ENST00000512151 KRTAP13-1Q8IUC0 172 aa5.08□□□□□ -1.6
NUP54-211ENST00000512151 PRLHP81277 87 aa5.07□□□□□ -1.6
NUP54-211ENST00000512151 C21orf62-AS1Q17RA5 79 aa5.07□□□□□ -1.6
NUP54-211ENST00000512151 FAM229BQ4G0N7 80 aa5.07□□□□□ -1.6
NUP54-211ENST00000512151 FAM19A1Q7Z5A9 133 aa5.07□□□□□ -1.6
NUP54-211ENST00000512151 TRBV7-6A0A0J9YX20 115 aa5.06□□□□□ -1.6
NUP54-211ENST00000512151 B5MCH6 92 aa5.06□□□□□ -1.6
NUP54-211ENST00000512151 M0R2T5 61 aa5.06□□□□□ -1.6
NUP54-211ENST00000512151 ZNF73O43830 326 aaPredicted RBP5.06□□□□□ -1.6
NUP54-211ENST00000512151 C6orf99Q4VX62 202 aa5.06□□□□□ -1.6
NUP54-211ENST00000512151 OBSCN-AS1Q96MR7 158 aa5.06□□□□□ -1.6
NUP54-211ENST00000512151 MT-ATP8P03928 68 aa5.05□□□□□ -1.6
NUP54-211ENST00000512151 C3orf22Q8N5N4 141 aa5.05□□□□□ -1.6
NUP54-211ENST00000512151 ORMDL1Q9P0S3 153 aa5.05□□□□□ -1.6
NUP54-211ENST00000512151 ETDCA0A1B0GVM5 59 aa5.04□□□□□ -1.6
NUP54-211ENST00000512151 TMEM256-PLSCR3K7ERE1 68 aa5.04□□□□□ -1.6
NUP54-211ENST00000512151 LINC00575Q6W349 94 aa5.04□□□□□ -1.6
NUP54-211ENST00000512151 SMCR5Q8TEV8 140 aa5.04□□□□□ -1.6
NUP54-211ENST00000512151 Q9BRP9 147 aa5.04□□□□□ -1.6
NUP54-211ENST00000512151 JMJD7-PLA2G4BH0Y9G9 81 aa5.04□□□□□ -1.6
NUP54-211ENST00000512151 ERC2-IT1O76042 136 aa5.04□□□□□ -1.6
NUP54-211ENST00000512151 UBE2AP49459 152 aa5.04□□□□□ -1.6
NUP54-211ENST00000512151 Q6ZRX8 168 aa5.04□□□□□ -1.6
NUP54-211ENST00000512151 COX7BP24311 80 aa5.03□□□□□ -1.6
NUP54-211ENST00000512151 ELOF1P60002 83 aaKnown RBP5.03□□□□□ -1.6
NUP54-211ENST00000512151 Q6Q795 121 aa5.03□□□□□ -1.6
NUP54-211ENST00000512151 SYNE2Q8WXH0 6885 aaKnown RBP5.02□□□□□ -1.61
NUP54-211ENST00000512151 hADV29S1A0JD25 119 aa5.02□□□□□ -1.61
NUP54-211ENST00000512151 HIGD2AQ9BW72 106 aa5.02□□□□□ -1.61
NUP54-211ENST00000512151 IMUPQ9GZP8 106 aa5.01□□□□□ -1.61
NUP54-211ENST00000512151 PDE6GP18545 87 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms