RNA–Protein interactions for RNA: ENST00000511452.1

NFXL1-208, Transcript of nuclear transcription factor, X-box binding like 1, human

TSL 5

Gene NFXL1, Length 419 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFXL1-208	ENST00000511452	BSN	Q9UPA5	3926 aa		0.5	□□□□□ -2.33
NFXL1-208	ENST00000511452	ABCA12	Q86UK0	2595 aa		0.5	□□□□□ -2.33
NFXL1-208	ENST00000511452	REV3L	O60673	3130 aa		0.5	□□□□□ -2.33
NFXL1-208	ENST00000511452	F8	P00451	2351 aa		0.49	□□□□□ -2.33
NFXL1-208	ENST00000511452	PLN	P26678	52 aa		0.49	□□□□□ -2.33
NFXL1-208	ENST00000511452	C6orf48	Q9UBA6	75 aa		0.49	□□□□□ -2.33
NFXL1-208	ENST00000511452	VWF	P04275	2813 aa		0.48	□□□□□ -2.33
NFXL1-208	ENST00000511452	RPS27	P42677	84 aa	Known RBP	0.48	□□□□□ -2.33
NFXL1-208	ENST00000511452	RPS27L	Q71UM5	84 aa	Known RBP	0.48	□□□□□ -2.33
NFXL1-208	ENST00000511452	CMC2	Q9NRP2	79 aa		0.48	□□□□□ -2.33
NFXL1-208	ENST00000511452		U3KQA8	63 aa		0.48	□□□□□ -2.33
NFXL1-208	ENST00000511452	SPTBN1	Q01082	2364 aa	Known RBP	0.48	□□□□□ -2.33
NFXL1-208	ENST00000511452	PRKDC	P78527	4128 aa	Known RBP	0.48	□□□□□ -2.33
NFXL1-208	ENST00000511452		H0YGX0	51 aa		0.47	□□□□□ -2.33
NFXL1-208	ENST00000511452	LINC00308	Q8TCZ7	52 aa		0.47	□□□□□ -2.33
NFXL1-208	ENST00000511452	TENM4	Q6N022	2769 aa		0.47	□□□□□ -2.33
NFXL1-208	ENST00000511452	BDP1	A6H8Y1	2624 aa		0.47	□□□□□ -2.33
NFXL1-208	ENST00000511452	PKDREJ	Q9NTG1	2253 aa		0.47	□□□□□ -2.33
NFXL1-208	ENST00000511452	IQGAP1	P46940	1657 aa		0.46	□□□□□ -2.34
NFXL1-208	ENST00000511452	TMEM167B	Q9NRX6	74 aa		0.46	□□□□□ -2.34
NFXL1-208	ENST00000511452	FAT2	Q9NYQ8	4349 aa		0.46	□□□□□ -2.34
NFXL1-208	ENST00000511452	DDX60	Q8IY21	1712 aa	Known RBP	0.46	□□□□□ -2.34
NFXL1-208	ENST00000511452	OTOG	Q6ZRI0	2925 aa		0.45	□□□□□ -2.34
NFXL1-208	ENST00000511452	CELSR1	Q9NYQ6	3014 aa		0.45	□□□□□ -2.34
NFXL1-208	ENST00000511452	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	0.45	□□□□□ -2.34
NFXL1-208	ENST00000511452	LMO7	Q8WWI1	1683 aa		0.45	□□□□□ -2.34
NFXL1-208	ENST00000511452	USP24	Q9UPU5	2620 aa		0.45	□□□□□ -2.34
NFXL1-208	ENST00000511452	TPR	P12270	2363 aa	Known RBP	0.45	□□□□□ -2.34
NFXL1-208	ENST00000511452		M0R2T5	61 aa		0.44	□□□□□ -2.34
NFXL1-208	ENST00000511452	PRM1	P04553	51 aa		0.44	□□□□□ -2.34
NFXL1-208	ENST00000511452	WT1-AS	Q06250	92 aa		0.44	□□□□□ -2.34
NFXL1-208	ENST00000511452	DEFB135	Q30KP9	77 aa		0.44	□□□□□ -2.34
NFXL1-208	ENST00000511452	GVINP1	Q7Z2Y8	2422 aa		0.44	□□□□□ -2.34
NFXL1-208	ENST00000511452	KNL1	Q8NG31	2342 aa		0.43	□□□□□ -2.34
NFXL1-208	ENST00000511452	TNXB	P22105	4242 aa		0.43	□□□□□ -2.34
NFXL1-208	ENST00000511452	NCOR1	O75376	2440 aa		0.43	□□□□□ -2.34
NFXL1-208	ENST00000511452	SMIM27	A0A1W2PRY6	76 aa		0.43	□□□□□ -2.34
NFXL1-208	ENST00000511452	TOMM5	Q8N4H5	51 aa		0.43	□□□□□ -2.34
NFXL1-208	ENST00000511452		S4R3F8	94 aa		0.43	□□□□□ -2.34
NFXL1-208	ENST00000511452	IQGAP2	Q13576	1575 aa		0.43	□□□□□ -2.34
NFXL1-208	ENST00000511452	DEFB106A	Q8N104	65 aa		0.42	□□□□□ -2.34
NFXL1-208	ENST00000511452	ABRACL	Q9P1F3	81 aa		0.42	□□□□□ -2.34
NFXL1-208	ENST00000511452	TRANK1	O15050	2925 aa		0.42	□□□□□ -2.34
NFXL1-208	ENST00000511452	AKAP6	Q13023	2319 aa		0.42	□□□□□ -2.34
NFXL1-208	ENST00000511452	HUWE1	Q7Z6Z7	4374 aa	Known RBP	0.41	□□□□□ -2.34
NFXL1-208	ENST00000511452	TFF3	Q07654	80 aa		0.41	□□□□□ -2.34
NFXL1-208	ENST00000511452	WNK2	Q9Y3S1	2297 aa		0.41	□□□□□ -2.34
NFXL1-208	ENST00000511452	LYST	Q99698	3801 aa		0.41	□□□□□ -2.34
NFXL1-208	ENST00000511452	LRP1	Q07954	4544 aa	Known RBP	0.41	□□□□□ -2.34
NFXL1-208	ENST00000511452	PIEZO1	Q92508	2521 aa		0.4	□□□□□ -2.34
NFXL1-208	ENST00000511452	DSP	P15924	2871 aa	Known RBP	0.4	□□□□□ -2.34
NFXL1-208	ENST00000511452	FAM208A	Q9UK61	1670 aa	Known RBP	0.4	□□□□□ -2.34
NFXL1-208	ENST00000511452	CSPG4	Q6UVK1	2322 aa		0.4	□□□□□ -2.35
NFXL1-208	ENST00000511452	MDN1	Q9NU22	5596 aa		0.4	□□□□□ -2.35
NFXL1-208	ENST00000511452	LINC01546	A6NGU7	62 aa		0.4	□□□□□ -2.35
NFXL1-208	ENST00000511452		H0YGG7	62 aa		0.4	□□□□□ -2.35
NFXL1-208	ENST00000511452	PRLH	P81277	87 aa		0.4	□□□□□ -2.35
NFXL1-208	ENST00000511452	KRTAP21-1	Q3LI58	79 aa		0.4	□□□□□ -2.35
NFXL1-208	ENST00000511452	SYNE1	Q8NF91	8797 aa	Known RBP	0.39	□□□□□ -2.35
NFXL1-208	ENST00000511452	CHD6	Q8TD26	2715 aa		0.39	□□□□□ -2.35
NFXL1-208	ENST00000511452	NAV2	Q8IVL1	2488 aa		0.39	□□□□□ -2.35
NFXL1-208	ENST00000511452	NFAT5	O94916	1531 aa		0.38	□□□□□ -2.35
NFXL1-208	ENST00000511452	TOP2A	P11388	1531 aa	Known RBP	0.38	□□□□□ -2.35
NFXL1-208	ENST00000511452	KMT2A	Q03164	3969 aa		0.38	□□□□□ -2.35
NFXL1-208	ENST00000511452	PKD1L1	Q8TDX9	2849 aa		0.38	□□□□□ -2.35
NFXL1-208	ENST00000511452	MYCBP2	O75592	4640 aa		0.38	□□□□□ -2.35
NFXL1-208	ENST00000511452	KIF21B	O75037	1637 aa		0.38	□□□□□ -2.35
NFXL1-208	ENST00000511452	ATR	Q13535	2644 aa		0.37	□□□□□ -2.35
NFXL1-208	ENST00000511452	PDE4DIP	Q5VU43	2346 aa		0.37	□□□□□ -2.35
NFXL1-208	ENST00000511452	PHGR1	C9JFL3	82 aa		0.37	□□□□□ -2.35
NFXL1-208	ENST00000511452	KAAG1	Q9UBP8	84 aa		0.37	□□□□□ -2.35
NFXL1-208	ENST00000511452		H3BUA1	57 aa		0.36	□□□□□ -2.35
NFXL1-208	ENST00000511452	WFDC10B	Q8IUB3	73 aa		0.36	□□□□□ -2.35
NFXL1-208	ENST00000511452	ABCA2	Q9BZC7	2435 aa		0.36	□□□□□ -2.35
NFXL1-208	ENST00000511452	AKAP13	Q12802	2813 aa		0.36	□□□□□ -2.35
NFXL1-208	ENST00000511452	IGF2R	P11717	2491 aa		0.36	□□□□□ -2.35
NFXL1-208	ENST00000511452	KMT2D	O14686	5537 aa		0.35	□□□□□ -2.35
NFXL1-208	ENST00000511452	TNRC18	O15417	2968 aa	Predicted RBP	0.35	□□□□□ -2.35
NFXL1-208	ENST00000511452	PRRC2C	Q9Y520	2896 aa	Known RBP	0.35	□□□□□ -2.35
NFXL1-208	ENST00000511452	PCNX1	Q96RV3	2341 aa		0.35	□□□□□ -2.35
NFXL1-208	ENST00000511452	UBR5	O95071	2799 aa	Predicted RBP	0.34	□□□□□ -2.35
NFXL1-208	ENST00000511452	SMIM2	Q9BVW6	85 aa		0.34	□□□□□ -2.36
NFXL1-208	ENST00000511452	UNC79	Q9P2D8	2635 aa		0.34	□□□□□ -2.36
NFXL1-208	ENST00000511452	LPA	P08519	4548 aa		0.33	□□□□□ -2.36
NFXL1-208	ENST00000511452	VPS13B	Q7Z7G8	4022 aa		0.33	□□□□□ -2.36
NFXL1-208	ENST00000511452	SPRR2D	P22532	72 aa		0.32	□□□□□ -2.36
NFXL1-208	ENST00000511452	ZFYVE26	Q68DK2	2539 aa		0.31	□□□□□ -2.36
NFXL1-208	ENST00000511452	IGLV5-48	A0A075B6I7	105 aa		0.31	□□□□□ -2.36
NFXL1-208	ENST00000511452	EP300	Q09472	2414 aa	Predicted RBP	0.3	□□□□□ -2.36
NFXL1-208	ENST00000511452	FAT4	Q6V0I7	4981 aa		0.3	□□□□□ -2.36
NFXL1-208	ENST00000511452	HMCN2	Q8NDA2	5059 aa		0.3	□□□□□ -2.36
NFXL1-208	ENST00000511452	MAST4	O15021	2626 aa		0.3	□□□□□ -2.36
NFXL1-208	ENST00000511452	PKD1	P98161	4303 aa		0.3	□□□□□ -2.36
NFXL1-208	ENST00000511452	NOP10	Q9NPE3	64 aa	Known RBP	0.3	□□□□□ -2.36
NFXL1-208	ENST00000511452	SPTA1	P02549	2419 aa		0.3	□□□□□ -2.36
NFXL1-208	ENST00000511452	SACS	Q9NZJ4	4579 aa		0.3	□□□□□ -2.36
NFXL1-208	ENST00000511452	CLTCL1	P53675	1640 aa		0.3	□□□□□ -2.36
NFXL1-208	ENST00000511452	HRNR	Q86YZ3	2850 aa	Predicted RBP	0.3	□□□□□ -2.36
NFXL1-208	ENST00000511452	PDZD2	O15018	2839 aa		0.29	□□□□□ -2.36
NFXL1-208	ENST00000511452	ATP7A	Q04656	1500 aa		0.29	□□□□□ -2.36

Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms