RNA–Protein interactions for RNA: ENST00000510866.5

KDM3B-207, Transcript of lysine demethylase 3B, humanhuman

TSL 1 (best)

Gene KDM3B, Length 6,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-207ENST00000510866 PRAC1Q96KF2 57 aa4.45□□□□□ -1.7
KDM3B-207ENST00000510866 PRUNE2Q8WUY3 3088 aa4.45□□□□□ -1.7
KDM3B-207ENST00000510866 KRTAP10-2P60368 255 aa4.43□□□□□ -1.7
KDM3B-207ENST00000510866 KRTAP10-1P60331 282 aa4.43□□□□□ -1.7
KDM3B-207ENST00000510866 CDH23Q9H251 3354 aa4.42□□□□□ -1.7
KDM3B-207ENST00000510866 SPANXA2-OT1Q8N9U9 137 aa4.42□□□□□ -1.7
KDM3B-207ENST00000510866 M0R2T5 61 aa4.41□□□□□ -1.7
KDM3B-207ENST00000510866 CSAG1Q6PB30 78 aa4.41□□□□□ -1.7
KDM3B-207ENST00000510866 CENPEQ02224 2701 aa4.41□□□□□ -1.7
KDM3B-207ENST00000510866 CAMK2N1Q7Z7J9 78 aa4.4□□□□□ -1.7
KDM3B-207ENST00000510866 NOTCH1P46531 2555 aa4.39□□□□□ -1.71
KDM3B-207ENST00000510866 Q8NDZ9 215 aa4.39□□□□□ -1.71
KDM3B-207ENST00000510866 Q75L30 129 aa4.39□□□□□ -1.71
KDM3B-207ENST00000510866 NBEAL1Q6ZS30 2694 aa4.38□□□□□ -1.71
KDM3B-207ENST00000510866 SPINK7P58062 85 aa4.38□□□□□ -1.71
KDM3B-207ENST00000510866 UNC80Q8N2C7 3258 aa4.38□□□□□ -1.71
KDM3B-207ENST00000510866 A0A1B0GU33 70 aa4.38□□□□□ -1.71
KDM3B-207ENST00000510866 KRTAP26-1Q6PEX3 210 aa4.38□□□□□ -1.71
KDM3B-207ENST00000510866 BAHCC1Q9P281 2608 aa4.37□□□□□ -1.71
KDM3B-207ENST00000510866 DMAC1Q96GE9 116 aa4.37□□□□□ -1.71
KDM3B-207ENST00000510866 SPRR1AP35321 89 aa4.37□□□□□ -1.71
KDM3B-207ENST00000510866 SETXQ7Z333 2677 aaKnown RBP4.37□□□□□ -1.71
KDM3B-207ENST00000510866 WDFY4Q6ZS81 3184 aa4.36□□□□□ -1.71
KDM3B-207ENST00000510866 IGSF10Q6WRI0 2623 aa4.36□□□□□ -1.71
KDM3B-207ENST00000510866 XIRP2A4UGR9 3374 aa4.35□□□□□ -1.71
KDM3B-207ENST00000510866 Q6ZR54 194 aa4.35□□□□□ -1.71
KDM3B-207ENST00000510866 CFAP54Q96N23 3096 aa4.34□□□□□ -1.71
KDM3B-207ENST00000510866 TEP1Q99973 2627 aaKnown RBP4.34□□□□□ -1.72
KDM3B-207ENST00000510866 SZT2Q5T011 3432 aa4.33□□□□□ -1.72
KDM3B-207ENST00000510866 DSPP15924 2871 aaKnown RBP4.33□□□□□ -1.72
KDM3B-207ENST00000510866 STAB2Q8WWQ8 2551 aa4.33□□□□□ -1.72
KDM3B-207ENST00000510866 Q5XG85 94 aa4.33□□□□□ -1.72
KDM3B-207ENST00000510866 ZCCHC13Q8WW36 166 aaKnown RBP4.33□□□□□ -1.72
KDM3B-207ENST00000510866 KRTAP21-3Q3LHN1 58 aa4.32□□□□□ -1.72
KDM3B-207ENST00000510866 SEC61BP60468 96 aaKnown RBP4.32□□□□□ -1.72
KDM3B-207ENST00000510866 LAMA2P24043 3122 aaKnown RBP4.32□□□□□ -1.72
KDM3B-207ENST00000510866 SPRR1BP22528 89 aa4.31□□□□□ -1.72
KDM3B-207ENST00000510866 TEX15Q9BXT5 2789 aa4.31□□□□□ -1.72
KDM3B-207ENST00000510866 PANO1I0J062 215 aa4.31□□□□□ -1.72
KDM3B-207ENST00000510866 TRIOO75962 3097 aa4.31□□□□□ -1.72
KDM3B-207ENST00000510866 CHD6Q8TD26 2715 aa4.3□□□□□ -1.72
KDM3B-207ENST00000510866 KRTAP16-1A8MUX0 517 aa4.3□□□□□ -1.72
KDM3B-207ENST00000510866 MMP24-AS1A0A0U1RRL7 71 aa4.3□□□□□ -1.72
KDM3B-207ENST00000510866 UNC79Q9P2D8 2635 aa4.29□□□□□ -1.72
KDM3B-207ENST00000510866 HRES1P13985 223 aa4.29□□□□□ -1.72
KDM3B-207ENST00000510866 LINC01558Q9Y6Z2 57 aa4.29□□□□□ -1.72
KDM3B-207ENST00000510866 S4R3F8 94 aa4.29□□□□□ -1.72
KDM3B-207ENST00000510866 OCR1Q9BZK8 76 aa4.28□□□□□ -1.72
KDM3B-207ENST00000510866 COL6A5A8TX70 2615 aa4.27□□□□□ -1.73
KDM3B-207ENST00000510866 TNRC18O15417 2968 aaPredicted RBP4.27□□□□□ -1.73
KDM3B-207ENST00000510866 OXTP01178 125 aa4.27□□□□□ -1.73
KDM3B-207ENST00000510866 Q5VV11 94 aa4.27□□□□□ -1.73
KDM3B-207ENST00000510866 ROMO1P60602 79 aa4.26□□□□□ -1.73
KDM3B-207ENST00000510866 H1FX-AS1Q4G0G2 97 aa4.26□□□□□ -1.73
KDM3B-207ENST00000510866 LINC00472Q9H8W2 130 aa4.26□□□□□ -1.73
KDM3B-207ENST00000510866 A0A0C4DFX4 3053 aa4.26□□□□□ -1.73
KDM3B-207ENST00000510866 DMBT1Q9UGM3 2413 aaPredicted RBP4.26□□□□□ -1.73
KDM3B-207ENST00000510866 Q8N9P0 234 aaPredicted RBP4.26□□□□□ -1.73
KDM3B-207ENST00000510866 SPTBN5Q9NRC6 3674 aaKnown RBP4.25□□□□□ -1.73
KDM3B-207ENST00000510866 FP248Q71RG6 208 aaPredicted RBP4.25□□□□□ -1.73
KDM3B-207ENST00000510866 Q5W150 140 aa4.24□□□□□ -1.73
KDM3B-207ENST00000510866 Q6ZRN7 208 aaPredicted RBP4.24□□□□□ -1.73
KDM3B-207ENST00000510866 VPS13AQ96RL7 3174 aa4.23□□□□□ -1.73
KDM3B-207ENST00000510866 A0A087X002 238 aa4.22□□□□□ -1.73
KDM3B-207ENST00000510866 CELSR3Q9NYQ7 3312 aa4.22□□□□□ -1.73
KDM3B-207ENST00000510866 DNAH14Q0VDD8 3507 aa4.22□□□□□ -1.73
KDM3B-207ENST00000510866 PLAC4Q8WY50 150 aa4.21□□□□□ -1.74
KDM3B-207ENST00000510866 KRTAP4-16G5E9R7 235 aaPredicted RBP4.2□□□□□ -1.74
KDM3B-207ENST00000510866 COL6A3P12111 3177 aa4.2□□□□□ -1.74
KDM3B-207ENST00000510866 CYSTM1Q9H1C7 97 aa4.2□□□□□ -1.74
KDM3B-207ENST00000510866 ITPR2Q14571 2701 aa4.2□□□□□ -1.74
KDM3B-207ENST00000510866 LAMA1P25391 3075 aa4.19□□□□□ -1.74
KDM3B-207ENST00000510866 GCN1Q92616 2671 aaKnown RBP4.19□□□□□ -1.74
KDM3B-207ENST00000510866 KRTAP11-1Q8IUC1 163 aa4.18□□□□□ -1.74
KDM3B-207ENST00000510866 VCANP13611 3396 aa4.18□□□□□ -1.74
KDM3B-207ENST00000510866 R4GN34 69 aa4.18□□□□□ -1.74
KDM3B-207ENST00000510866 RPL37P61927 97 aaKnown RBP4.17□□□□□ -1.74
KDM3B-207ENST00000510866 FRYQ5TBA9 3013 aa4.16□□□□□ -1.74
KDM3B-207ENST00000510866 C20orf166-AS1Q96NR2 134 aa4.14□□□□□ -1.75
KDM3B-207ENST00000510866 NSD1Q96L73 2696 aaPredicted RBP4.14□□□□□ -1.75
KDM3B-207ENST00000510866 KMT2BQ9UMN6 2715 aaPredicted RBP4.14□□□□□ -1.75
KDM3B-207ENST00000510866 SPATA8Q6RVD6 105 aa4.13□□□□□ -1.75
KDM3B-207ENST00000510866 MAP1AP78559 2803 aaPredicted RBP4.13□□□□□ -1.75
KDM3B-207ENST00000510866 UBR5O95071 2799 aaPredicted RBP4.13□□□□□ -1.75
KDM3B-207ENST00000510866 ATMQ13315 3056 aa4.12□□□□□ -1.75
KDM3B-207ENST00000510866 M0QZ58 72 aa4.12□□□□□ -1.75
KDM3B-207ENST00000510866 KRTAP7-1Q8IUC3 87 aa4.12□□□□□ -1.75
KDM3B-207ENST00000510866 FRYLO94915 3013 aa4.12□□□□□ -1.75
KDM3B-207ENST00000510866 EYSQ5T1H1 3165 aa4.12□□□□□ -1.75
KDM3B-207ENST00000510866 RPS29P62273 56 aaKnown RBP4.12□□□□□ -1.75
KDM3B-207ENST00000510866 DMXL2Q8TDJ6 3036 aa4.12□□□□□ -1.75
KDM3B-207ENST00000510866 UTP20O75691 2785 aaKnown RBP4.11□□□□□ -1.75
KDM3B-207ENST00000510866 NBEAL2Q6ZNJ1 2754 aa4.1□□□□□ -1.75
KDM3B-207ENST00000510866 USP34Q70CQ2 3546 aa4.1□□□□□ -1.75
KDM3B-207ENST00000510866 NDUFAF8A1L188 74 aa4.1□□□□□ -1.75
KDM3B-207ENST00000510866 COL12A1Q99715 3063 aa4.1□□□□□ -1.75
KDM3B-207ENST00000510866 KRTAP13-2Q52LG2 175 aa4.1□□□□□ -1.75
KDM3B-207ENST00000510866 ITPR1Q14643 2758 aa4.1□□□□□ -1.75
KDM3B-207ENST00000510866 LRBAP50851 2863 aa4.1□□□□□ -1.75
KDM3B-207ENST00000510866 BOD1L1Q8NFC6 3051 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms