RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 ITPR2Q14571 2701 aa5.36□□□□□ -1.55
HTT-208ENST00000510626 DSPP15924 2871 aaKnown RBP5.36□□□□□ -1.55
HTT-208ENST00000510626 IGSF10Q6WRI0 2623 aa5.36□□□□□ -1.55
HTT-208ENST00000510626 FAM229BQ4G0N7 80 aa5.34□□□□□ -1.55
HTT-208ENST00000510626 SMR3AQ99954 134 aa5.33□□□□□ -1.56
HTT-208ENST00000510626 IGLV7-43P04211 117 aa5.32□□□□□ -1.56
HTT-208ENST00000510626 Q6ZR54 194 aa5.32□□□□□ -1.56
HTT-208ENST00000510626 A0A096LNT2 108 aa5.32□□□□□ -1.56
HTT-208ENST00000510626 SPRR1AP35321 89 aa5.31□□□□□ -1.56
HTT-208ENST00000510626 LCE6AA0A183 80 aa5.31□□□□□ -1.56
HTT-208ENST00000510626 SPRR1BP22528 89 aa5.31□□□□□ -1.56
HTT-208ENST00000510626 CHD7Q9P2D1 2997 aa5.29□□□□□ -1.56
HTT-208ENST00000510626 ZNF575Q86XF7 245 aa5.29□□□□□ -1.56
HTT-208ENST00000510626 A0A087WTM6 91 aa5.29□□□□□ -1.56
HTT-208ENST00000510626 HRES1P13985 223 aa5.29□□□□□ -1.56
HTT-208ENST00000510626 NBEAQ8NFP9 2946 aa5.29□□□□□ -1.56
HTT-208ENST00000510626 LINC00472Q9H8W2 130 aa5.28□□□□□ -1.56
HTT-208ENST00000510626 MGAQ8IWI9 3026 aa5.27□□□□□ -1.57
HTT-208ENST00000510626 KRTAP16-1A8MUX0 517 aa5.27□□□□□ -1.57
HTT-208ENST00000510626 PSORS1C2Q9UIG4 136 aa5.27□□□□□ -1.57
HTT-208ENST00000510626 NOTCH2NLQ7Z3S9 236 aa5.27□□□□□ -1.57
HTT-208ENST00000510626 SPATA8Q6RVD6 105 aa5.26□□□□□ -1.57
HTT-208ENST00000510626 PRR26Q8N8Z3 221 aa5.26□□□□□ -1.57
HTT-208ENST00000510626 NIPBLQ6KC79 2804 aaeCLIP5.25□□□□□ -1.57
HTT-208ENST00000510626 WWC2-AS2Q96NR7 200 aa5.25□□□□□ -1.57
HTT-208ENST00000510626 TNRC18O15417 2968 aaPredicted RBP5.25□□□□□ -1.57
HTT-208ENST00000510626 ROMO1P60602 79 aa5.24□□□□□ -1.57
HTT-208ENST00000510626 ZCCHC13Q8WW36 166 aaKnown RBP5.24□□□□□ -1.57
HTT-208ENST00000510626 MMP24-AS1A0A0U1RRL7 71 aa5.24□□□□□ -1.57
HTT-208ENST00000510626 A0A1W2PNN7 141 aa5.24□□□□□ -1.57
HTT-208ENST00000510626 KALRNO60229 2985 aa5.24□□□□□ -1.57
HTT-208ENST00000510626 C5orf42Q9H799 3197 aa5.23□□□□□ -1.57
HTT-208ENST00000510626 TRIOO75962 3097 aa5.23□□□□□ -1.57
HTT-208ENST00000510626 Q8N1X5 172 aa5.22□□□□□ -1.57
HTT-208ENST00000510626 A0A0D9SG42 100 aa5.22□□□□□ -1.57
HTT-208ENST00000510626 CSAG1Q6PB30 78 aa5.22□□□□□ -1.57
HTT-208ENST00000510626 UTRNP46939 3433 aa5.22□□□□□ -1.57
HTT-208ENST00000510626 CYSTM1Q9H1C7 97 aa5.22□□□□□ -1.57
HTT-208ENST00000510626 SEC61BP60468 96 aaKnown RBP5.21□□□□□ -1.58
HTT-208ENST00000510626 A6NN06 94 aa5.2□□□□□ -1.58
HTT-208ENST00000510626 RPL37P61927 97 aaKnown RBP5.2□□□□□ -1.58
HTT-208ENST00000510626 CHD9Q3L8U1 2897 aa5.2□□□□□ -1.58
HTT-208ENST00000510626 TACC2O95359 2948 aa5.19□□□□□ -1.58
HTT-208ENST00000510626 LRBAP50851 2863 aa5.19□□□□□ -1.58
HTT-208ENST00000510626 RPS29P62273 56 aaKnown RBP5.19□□□□□ -1.58
HTT-208ENST00000510626 Q5W150 140 aa5.18□□□□□ -1.58
HTT-208ENST00000510626 ANAPC11Q9NYG5 84 aa5.18□□□□□ -1.58
HTT-208ENST00000510626 ASH1LQ9NR48 2969 aaKnown RBP5.18□□□□□ -1.58
HTT-208ENST00000510626 KRTAP10-11P60412 298 aa5.18□□□□□ -1.58
HTT-208ENST00000510626 SPINK7P58062 85 aa5.17□□□□□ -1.58
HTT-208ENST00000510626 KRTAP24-1Q3LI83 254 aa5.17□□□□□ -1.58
HTT-208ENST00000510626 K7EIL1 84 aa5.17□□□□□ -1.58
HTT-208ENST00000510626 S4R3F8 94 aa5.16□□□□□ -1.58
HTT-208ENST00000510626 PRAC1Q96KF2 57 aa5.16□□□□□ -1.58
HTT-208ENST00000510626 C9orf92A6NGG3 77 aa5.16□□□□□ -1.58
HTT-208ENST00000510626 A0A0G2JQZ4 141 aa5.15□□□□□ -1.58
HTT-208ENST00000510626 OXTP01178 125 aa5.15□□□□□ -1.59
HTT-208ENST00000510626 CELSR2Q9HCU4 2923 aa5.14□□□□□ -1.59
HTT-208ENST00000510626 PLAC8Q9NZF1 115 aa5.13□□□□□ -1.59
HTT-208ENST00000510626 REV3LO60673 3130 aa5.13□□□□□ -1.59
HTT-208ENST00000510626 FLNCQ14315 2725 aa5.12□□□□□ -1.59
HTT-208ENST00000510626 H1FX-AS1Q4G0G2 97 aa5.11□□□□□ -1.59
HTT-208ENST00000510626 HIVEP1P15822 2718 aa5.11□□□□□ -1.59
HTT-208ENST00000510626 Q6ZSA8 131 aa5.11□□□□□ -1.59
HTT-208ENST00000510626 TENM3Q9P273 2699 aa5.11□□□□□ -1.59
HTT-208ENST00000510626 KRTAP29-1A8MX34 341 aaPredicted RBP5.11□□□□□ -1.59
HTT-208ENST00000510626 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.11□□□□□ -1.59
HTT-208ENST00000510626 PRUNE2Q8WUY3 3088 aa5.1□□□□□ -1.59
HTT-208ENST00000510626 KRTAP25-1Q3LHN0 102 aa5.1□□□□□ -1.59
HTT-208ENST00000510626 M0QZ58 72 aa5.1□□□□□ -1.59
HTT-208ENST00000510626 ADGRG4Q8IZF6 3080 aa5.1□□□□□ -1.59
HTT-208ENST00000510626 J3QL48 77 aa5.09□□□□□ -1.59
HTT-208ENST00000510626 NF1P21359 2839 aa5.08□□□□□ -1.6
HTT-208ENST00000510626 FREM2Q5SZK8 3169 aa5.07□□□□□ -1.6
HTT-208ENST00000510626 CASC10Q5T4H9 136 aa5.07□□□□□ -1.6
HTT-208ENST00000510626 LAMA1P25391 3075 aa5.07□□□□□ -1.6
HTT-208ENST00000510626 KRTAP26-1Q6PEX3 210 aa5.05□□□□□ -1.6
HTT-208ENST00000510626 PP632Q6XCG6 107 aa5.05□□□□□ -1.6
HTT-208ENST00000510626 KRTAP4-16G5E9R7 235 aaPredicted RBP5.05□□□□□ -1.6
HTT-208ENST00000510626 WDFY4Q6ZS81 3184 aa5.04□□□□□ -1.6
HTT-208ENST00000510626 DMXL2Q8TDJ6 3036 aa5.04□□□□□ -1.6
HTT-208ENST00000510626 DMXL1Q9Y485 3027 aa5.03□□□□□ -1.6
HTT-208ENST00000510626 COL12A1Q99715 3063 aa5.03□□□□□ -1.6
HTT-208ENST00000510626 ZZEF1O43149 2961 aa5.03□□□□□ -1.6
HTT-208ENST00000510626 Q8NDZ9 215 aa5.03□□□□□ -1.6
HTT-208ENST00000510626 KRTAP10-3P60369 221 aa5.02□□□□□ -1.61
HTT-208ENST00000510626 KRTAP1-3Q8IUG1 177 aa5□□□□□ -1.61
HTT-208ENST00000510626 BOD1L1Q8NFC6 3051 aa5□□□□□ -1.61
HTT-208ENST00000510626 UNC80Q8N2C7 3258 aa4.99□□□□□ -1.61
HTT-208ENST00000510626 CRYBG3Q68DQ2 2970 aa4.99□□□□□ -1.61
HTT-208ENST00000510626 R4GN34 69 aa4.99□□□□□ -1.61
HTT-208ENST00000510626 PANO1I0J062 215 aa4.98□□□□□ -1.61
HTT-208ENST00000510626 RANBP2P49792 3224 aaKnown RBP4.98□□□□□ -1.61
HTT-208ENST00000510626 PDZD2O15018 2839 aa4.98□□□□□ -1.61
HTT-208ENST00000510626 KRTAP1-1Q07627 177 aa4.98□□□□□ -1.61
HTT-208ENST00000510626 TENM1Q9UKZ4 2725 aa4.96□□□□□ -1.61
HTT-208ENST00000510626 HTTP42858 3142 aa4.94□□□□□ -1.62
HTT-208ENST00000510626 XIRP2A4UGR9 3374 aa4.93□□□□□ -1.62
HTT-208ENST00000510626 DCHS2Q6V1P9 2916 aa4.93□□□□□ -1.62
HTT-208ENST00000510626 MKI67P46013 3256 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms