RNA–Protein interactions for RNA: ENST00000508808.1

TRIM23-206, Transcript of tripartite motif containing 23, humanhuman

TSL 5

Gene TRIM23, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-206ENST00000508808 ZNF833PQ6ZTB9 187 aa0.54□□□□□ -2.32
TRIM23-206ENST00000508808 RPS27LQ71UM5 84 aaKnown RBP0.54□□□□□ -2.32
TRIM23-206ENST00000508808 PHF5AQ7RTV0 110 aaKnown RBP0.54□□□□□ -2.32
TRIM23-206ENST00000508808 C5orf38Q86SI9 138 aa0.54□□□□□ -2.32
TRIM23-206ENST00000508808 SBSPONQ8IVN8 264 aa0.54□□□□□ -2.32
TRIM23-206ENST00000508808 Q8N6K4 173 aa0.54□□□□□ -2.32
TRIM23-206ENST00000508808 SERP2Q8N6R1 65 aa0.54□□□□□ -2.32
TRIM23-206ENST00000508808 WFDC9Q8NEX5 89 aa0.54□□□□□ -2.32
TRIM23-206ENST00000508808 SMIM4Q8WVI0 70 aa0.54□□□□□ -2.32
TRIM23-206ENST00000508808 TMEM141Q96I45 108 aa0.54□□□□□ -2.32
TRIM23-206ENST00000508808 LINC00467Q9BRT7 94 aa0.54□□□□□ -2.32
TRIM23-206ENST00000508808 LIMD2Q9BT23 127 aa0.54□□□□□ -2.32
TRIM23-206ENST00000508808 PRR15LQ9BU68 103 aa0.54□□□□□ -2.32
TRIM23-206ENST00000508808 BPESC1Q9GZL8 116 aa0.54□□□□□ -2.32
TRIM23-206ENST00000508808 SPANXCQ9NY87 97 aa0.54□□□□□ -2.32
TRIM23-206ENST00000508808 PSENENQ9NZ42 101 aa0.54□□□□□ -2.32
TRIM23-206ENST00000508808 LAMTOR3Q9UHA4 124 aa0.54□□□□□ -2.32
TRIM23-206ENST00000508808 NDUFA12Q9UI09 145 aa0.54□□□□□ -2.32
TRIM23-206ENST00000508808 STAB2Q8WWQ8 2551 aa0.54□□□□□ -2.32
TRIM23-206ENST00000508808 USF3Q68DE3 2245 aa0.54□□□□□ -2.32
TRIM23-206ENST00000508808 TACC2O95359 2948 aa0.54□□□□□ -2.32
TRIM23-206ENST00000508808 PKHD1L1Q86WI1 4243 aa0.53□□□□□ -2.32
TRIM23-206ENST00000508808 PI4KAP42356 2102 aa0.53□□□□□ -2.32
TRIM23-206ENST00000508808 HUWE1Q7Z6Z7 4374 aaKnown RBP0.53□□□□□ -2.32
TRIM23-206ENST00000508808 TRBV7-1A0A0A6YYK4 115 aa0.53□□□□□ -2.32
TRIM23-206ENST00000508808 TRAV13-2A0A0B4J235 113 aa0.53□□□□□ -2.32
TRIM23-206ENST00000508808 TRBV7-7A0A0K0K1E9 115 aa0.53□□□□□ -2.32
TRIM23-206ENST00000508808 SPTY2D1-AS1A0A0U1RR47 76 aa0.53□□□□□ -2.32
TRIM23-206ENST00000508808 hDV103S1A0JD37 113 aa0.53□□□□□ -2.32
TRIM23-206ENST00000508808 CPSF4LA6NMK7 179 aaKnown RBP0.53□□□□□ -2.32
TRIM23-206ENST00000508808 A6NN06 94 aa0.53□□□□□ -2.32
TRIM23-206ENST00000508808 DEFB108AA8MXU0 73 aa0.53□□□□□ -2.32
TRIM23-206ENST00000508808 HCG22E2RYF7 251 aa0.53□□□□□ -2.32
TRIM23-206ENST00000508808 M0R1W7 72 aa0.53□□□□□ -2.32
TRIM23-206ENST00000508808 M0R2N4 97 aa0.53□□□□□ -2.32
TRIM23-206ENST00000508808 CCKP06307 115 aa0.53□□□□□ -2.32
TRIM23-206ENST00000508808 CXCL8P10145 99 aa0.53□□□□□ -2.32
TRIM23-206ENST00000508808 HMGA1P17096 107 aaKnown RBP0.53□□□□□ -2.32
TRIM23-206ENST00000508808 ATP5EP56381 51 aaPredicted RBP0.53□□□□□ -2.32
TRIM23-206ENST00000508808 SMIM11AP58511 58 aa0.53□□□□□ -2.32
TRIM23-206ENST00000508808 FXYD4P59646 89 aa0.53□□□□□ -2.32
TRIM23-206ENST00000508808 RPL38P63173 70 aaKnown RBP0.53□□□□□ -2.32
TRIM23-206ENST00000508808 PLGLAQ15195 96 aa0.53□□□□□ -2.32
TRIM23-206ENST00000508808 ATXN8Q156A1 80 aa0.53□□□□□ -2.32
TRIM23-206ENST00000508808 GDF5OSQ5U4N7 250 aa0.53□□□□□ -2.32
TRIM23-206ENST00000508808 SPANXN1Q5VSR9 72 aa0.53□□□□□ -2.32
TRIM23-206ENST00000508808 SLC48A1Q6P1K1 146 aa0.53□□□□□ -2.32
TRIM23-206ENST00000508808 KRTAP26-1Q6PEX3 210 aa0.53□□□□□ -2.32
TRIM23-206ENST00000508808 CASC2Q6XLA1 102 aa0.53□□□□□ -2.32
TRIM23-206ENST00000508808 COMMD6Q7Z4G1 85 aa0.53□□□□□ -2.32
TRIM23-206ENST00000508808 TRGV9Q99603 122 aa0.53□□□□□ -2.32
TRIM23-206ENST00000508808 NMES1Q9C002 83 aa0.53□□□□□ -2.32
TRIM23-206ENST00000508808 MRPL35Q9NZE8 188 aaKnown RBP0.53□□□□□ -2.32
TRIM23-206ENST00000508808 ORMDL1Q9P0S3 153 aa0.53□□□□□ -2.32
TRIM23-206ENST00000508808 ABRACLQ9P1F3 81 aa0.53□□□□□ -2.32
TRIM23-206ENST00000508808 VPS13BQ7Z7G8 4022 aa0.53□□□□□ -2.32
TRIM23-206ENST00000508808 MUC4Q99102 2169 aa0.53□□□□□ -2.32
TRIM23-206ENST00000508808 COL7A1Q02388 2944 aa0.52□□□□□ -2.33
TRIM23-206ENST00000508808 AHNAKQ09666 5890 aaKnown RBP0.52□□□□□ -2.33
TRIM23-206ENST00000508808 DNAH7Q8WXX0 4024 aa0.52□□□□□ -2.33
TRIM23-206ENST00000508808 MUC12Q9UKN1 5478 aa0.52□□□□□ -2.33
TRIM23-206ENST00000508808 DNAH2Q9P225 4427 aa0.52□□□□□ -2.33
TRIM23-206ENST00000508808 ABCA4P78363 2273 aa0.52□□□□□ -2.33
TRIM23-206ENST00000508808 TRBV25-1A0A075B6N4 114 aa0.52□□□□□ -2.33
TRIM23-206ENST00000508808 A0A087WSZ3 146 aa0.52□□□□□ -2.33
TRIM23-206ENST00000508808 TRAV22A0A0B4J277 110 aa0.52□□□□□ -2.33
TRIM23-206ENST00000508808 TRBV10-3A0A0K0K1G6 114 aa0.52□□□□□ -2.33
TRIM23-206ENST00000508808 MYMXA0A1B0GTQ4 84 aa0.52□□□□□ -2.33
TRIM23-206ENST00000508808 CTXND1A0A1B0GTU2 59 aa0.52□□□□□ -2.33
TRIM23-206ENST00000508808 D6R8Y8 96 aa0.52□□□□□ -2.33
TRIM23-206ENST00000508808 NDUFA3O95167 84 aa0.52□□□□□ -2.33
TRIM23-206ENST00000508808 PPP1R17O96001 155 aa0.52□□□□□ -2.33
TRIM23-206ENST00000508808 SMR3BP02814 79 aaPredicted RBP0.52□□□□□ -2.33
TRIM23-206ENST00000508808 ACYP1P07311 99 aa0.52□□□□□ -2.33
TRIM23-206ENST00000508808 IAPPP10997 89 aa0.52□□□□□ -2.33
TRIM23-206ENST00000508808 MRPS36P82909 103 aaKnown RBP0.52□□□□□ -2.33
TRIM23-206ENST00000508808 QRFPP83859 136 aa0.52□□□□□ -2.33
TRIM23-206ENST00000508808 MIR22HGQ0VDD5 57 aa0.52□□□□□ -2.33
TRIM23-206ENST00000508808 NREPQ16612 68 aa0.52□□□□□ -2.33
TRIM23-206ENST00000508808 C9orf116Q5BN46 136 aaPredicted RBP0.52□□□□□ -2.33
TRIM23-206ENST00000508808 C12orf73Q69YU5 71 aa0.52□□□□□ -2.33
TRIM23-206ENST00000508808 Q6JHZ5 121 aa0.52□□□□□ -2.33
TRIM23-206ENST00000508808 CSAG1Q6PB30 78 aa0.52□□□□□ -2.33
TRIM23-206ENST00000508808 LINC00643Q86TS7 51 aa0.52□□□□□ -2.33
TRIM23-206ENST00000508808 MUSTN1Q8IVN3 82 aa0.52□□□□□ -2.33
TRIM23-206ENST00000508808 DYNLRB2Q8TF09 96 aa0.52□□□□□ -2.33
TRIM23-206ENST00000508808 C4orf3Q8WVX3 66 aa0.52□□□□□ -2.33
TRIM23-206ENST00000508808 DIRC1Q969H9 104 aa0.52□□□□□ -2.33
TRIM23-206ENST00000508808 IFI27L1Q96BM0 104 aa0.52□□□□□ -2.33
TRIM23-206ENST00000508808 MCEEQ96PE7 176 aa0.52□□□□□ -2.33
TRIM23-206ENST00000508808 SPANXDQ9BXN6 97 aa0.52□□□□□ -2.33
TRIM23-206ENST00000508808 WFDC10AQ9H1F0 79 aa0.52□□□□□ -2.33
TRIM23-206ENST00000508808 DYNLRB1Q9NP97 96 aa0.52□□□□□ -2.33
TRIM23-206ENST00000508808 CMC2Q9NRP2 79 aa0.52□□□□□ -2.33
TRIM23-206ENST00000508808 TMEM14CQ9P0S9 112 aa0.52□□□□□ -2.33
TRIM23-206ENST00000508808 PRO1854Q9UHT4 67 aa0.52□□□□□ -2.33
TRIM23-206ENST00000508808 VPS13DQ5THJ4 4388 aa0.52□□□□□ -2.33
TRIM23-206ENST00000508808 APOBP04114 4563 aaKnown RBP0.52□□□□□ -2.33
TRIM23-206ENST00000508808 DNAH3Q8TD57 4116 aa0.52□□□□□ -2.33
TRIM23-206ENST00000508808 PKDREJQ9NTG1 2253 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms