RNA–Protein interactions for RNA: ENST00000506707.1

USP46-206, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-206ENST00000506707 LINC00575Q6W349 94 aa3.34□□□□□ -1.87
USP46-206ENST00000506707 C3orf22Q8N5N4 141 aa3.34□□□□□ -1.87
USP46-206ENST00000506707 TYMSOSQ8TAI1 123 aa3.34□□□□□ -1.87
USP46-206ENST00000506707 RAB37Q96AX2 223 aa3.34□□□□□ -1.87
USP46-206ENST00000506707 PRO1854Q9UHT4 67 aa3.34□□□□□ -1.87
USP46-206ENST00000506707 H7C2G1 150 aa3.33□□□□□ -1.88
USP46-206ENST00000506707 SPRR1BP22528 89 aa3.33□□□□□ -1.88
USP46-206ENST00000506707 LINC01547P58512 204 aaPredicted RBP3.33□□□□□ -1.88
USP46-206ENST00000506707 VAMP3Q15836 100 aa3.33□□□□□ -1.88
USP46-206ENST00000506707 BVES-AS1Q5T3Y7 98 aa3.33□□□□□ -1.88
USP46-206ENST00000506707 CTAG1AP78358 180 aa3.32□□□□□ -1.88
USP46-206ENST00000506707 NHP2Q9NX24 153 aaKnown RBP3.32□□□□□ -1.88
USP46-206ENST00000506707 HMCN2Q8NDA2 5059 aa3.31□□□□□ -1.88
USP46-206ENST00000506707 IGLV5-48A0A075B6I7 105 aa3.31□□□□□ -1.88
USP46-206ENST00000506707 TEX49A0A1B0GTD5 131 aa3.31□□□□□ -1.88
USP46-206ENST00000506707 hADV29S1A0JD25 119 aa3.31□□□□□ -1.88
USP46-206ENST00000506707 K7ERJ3 54 aa3.31□□□□□ -1.88
USP46-206ENST00000506707 SSBP3-AS1Q7Z2R9 100 aa3.31□□□□□ -1.88
USP46-206ENST00000506707 SMIM29Q86T20 159 aa3.31□□□□□ -1.88
USP46-206ENST00000506707 Q8N377 158 aa3.31□□□□□ -1.88
USP46-206ENST00000506707 DEFB105AQ8NG35 78 aa3.31□□□□□ -1.88
USP46-206ENST00000506707 IGLV9-49A0A0B4J1Y8 123 aa3.3□□□□□ -1.88
USP46-206ENST00000506707 TSTD3H0UI37 97 aa3.3□□□□□ -1.88
USP46-206ENST00000506707 H0YGX0 51 aa3.3□□□□□ -1.88
USP46-206ENST00000506707 TRIAP1O43715 76 aa3.3□□□□□ -1.88
USP46-206ENST00000506707 SLC25A20O43772 301 aa3.3□□□□□ -1.88
USP46-206ENST00000506707 TSPAN13O95857 204 aa3.3□□□□□ -1.88
USP46-206ENST00000506707 MOBPQ13875 183 aa3.3□□□□□ -1.88
USP46-206ENST00000506707 Q6ZQY7 126 aa3.3□□□□□ -1.88
USP46-206ENST00000506707 LINC00304Q8N9R0 145 aa3.3□□□□□ -1.88
USP46-206ENST00000506707 FAM218AQ96MZ4 157 aa3.3□□□□□ -1.88
USP46-206ENST00000506707 Q1RN00 199 aa3.29□□□□□ -1.88
USP46-206ENST00000506707 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.29□□□□□ -1.88
USP46-206ENST00000506707 Q8NBF4 154 aa3.29□□□□□ -1.88
USP46-206ENST00000506707 LAMTOR3Q9UHA4 124 aa3.29□□□□□ -1.88
USP46-206ENST00000506707 M0R143 59 aa3.28□□□□□ -1.88
USP46-206ENST00000506707 SPAG11AQ6PDA7 123 aa3.28□□□□□ -1.88
USP46-206ENST00000506707 A0A1B0GX51 115 aa3.27□□□□□ -1.89
USP46-206ENST00000506707 SPINK1P00995 79 aa3.27□□□□□ -1.89
USP46-206ENST00000506707 PSMB2P49721 201 aa3.27□□□□□ -1.89
USP46-206ENST00000506707 C9orf153Q5TBE3 101 aa3.27□□□□□ -1.89
USP46-206ENST00000506707 CLEC2BQ92478 149 aa3.27□□□□□ -1.89
USP46-206ENST00000506707 A0A0G2JQZ4 141 aa3.26□□□□□ -1.89
USP46-206ENST00000506707 SNCGO76070 127 aa3.26□□□□□ -1.89
USP46-206ENST00000506707 COX6CP09669 75 aa3.26□□□□□ -1.89
USP46-206ENST00000506707 OCIAD2Q56VL3 154 aa3.26□□□□□ -1.89
USP46-206ENST00000506707 SVIPQ8NHG7 77 aa3.26□□□□□ -1.89
USP46-206ENST00000506707 PPDPFLQ8WWR9 84 aa3.26□□□□□ -1.89
USP46-206ENST00000506707 IGLV8-61A0A075B6I0 122 aa3.25□□□□□ -1.89
USP46-206ENST00000506707 SCGB1C2P0DMR2 95 aa3.25□□□□□ -1.89
USP46-206ENST00000506707 RPS29P62273 56 aaKnown RBP3.25□□□□□ -1.89
USP46-206ENST00000506707 LST1O00453 97 aa3.24□□□□□ -1.89
USP46-206ENST00000506707 NDUFV3P56181 108 aaKnown RBP3.24□□□□□ -1.89
USP46-206ENST00000506707 CD164Q04900 197 aa3.24□□□□□ -1.89
USP46-206ENST00000506707 PRR4Q16378 134 aa3.24□□□□□ -1.89
USP46-206ENST00000506707 BATFQ16520 125 aa3.24□□□□□ -1.89
USP46-206ENST00000506707 HRCT1Q6UXD1 115 aa3.24□□□□□ -1.89
USP46-206ENST00000506707 RETNLBQ9BQ08 111 aa3.24□□□□□ -1.89
USP46-206ENST00000506707 NAA38Q9BRA0 125 aaKnown RBP3.24□□□□□ -1.89
USP46-206ENST00000506707 SNHG12Q9BXW3 62 aa3.24□□□□□ -1.89
USP46-206ENST00000506707 TRACP01848 142 aa3.23□□□□□ -1.89
USP46-206ENST00000506707 IGFL1Q6UW32 110 aa3.23□□□□□ -1.89
USP46-206ENST00000506707 LPAP08519 4548 aa3.23□□□□□ -1.89
USP46-206ENST00000506707 F8WEM9 126 aa3.22□□□□□ -1.89
USP46-206ENST00000506707 H3BUT2 72 aa3.22□□□□□ -1.89
USP46-206ENST00000506707 TMEM256-PLSCR3K7ERE1 68 aa3.22□□□□□ -1.89
USP46-206ENST00000506707 TAX1BP3O14907 124 aa3.22□□□□□ -1.89
USP46-206ENST00000506707 TCL1BO95988 128 aa3.22□□□□□ -1.89
USP46-206ENST00000506707 DNAL4O96015 105 aa3.22□□□□□ -1.89
USP46-206ENST00000506707 FABP2P12104 132 aa3.22□□□□□ -1.89
USP46-206ENST00000506707 Q6JHZ5 121 aa3.22□□□□□ -1.89
USP46-206ENST00000506707 ORMDL1Q9P0S3 153 aa3.22□□□□□ -1.89
USP46-206ENST00000506707 LRP2P98164 4655 aa3.22□□□□□ -1.89
USP46-206ENST00000506707 UBR4Q5T4S7 5183 aa3.22□□□□□ -1.89
USP46-206ENST00000506707 IGLV7-46A0A075B6I9 117 aa3.21□□□□□ -1.9
USP46-206ENST00000506707 H3BMG7 143 aa3.21□□□□□ -1.9
USP46-206ENST00000506707 H3BQ85 93 aa3.21□□□□□ -1.9
USP46-206ENST00000506707 C21orf62-AS1Q17RA5 79 aa3.21□□□□□ -1.9
USP46-206ENST00000506707 Q5XG85 94 aa3.21□□□□□ -1.9
USP46-206ENST00000506707 BAALC-AS2P0C853 105 aa3.2□□□□□ -1.9
USP46-206ENST00000506707 KRTAP10-7P60409 375 aaPredicted RBP3.2□□□□□ -1.9
USP46-206ENST00000506707 UBE2V1Q13404 147 aa3.2□□□□□ -1.9
USP46-206ENST00000506707 ATXN8Q156A1 80 aa3.2□□□□□ -1.9
USP46-206ENST00000506707 KRTAP5-11Q6L8G4 156 aa3.2□□□□□ -1.9
USP46-206ENST00000506707 FP248Q71RG6 208 aaPredicted RBP3.2□□□□□ -1.9
USP46-206ENST00000506707 TRBV20-1A0A075B6N2 111 aa3.19□□□□□ -1.9
USP46-206ENST00000506707 TRBV7-7A0A0K0K1E9 115 aa3.19□□□□□ -1.9
USP46-206ENST00000506707 A0A1W2PPM0 123 aa3.19□□□□□ -1.9
USP46-206ENST00000506707 PCP4L1A6NKN8 68 aa3.19□□□□□ -1.9
USP46-206ENST00000506707 TPRXLQ17RH7 258 aa3.19□□□□□ -1.9
USP46-206ENST00000506707 C1orf195Q5TG92 126 aa3.19□□□□□ -1.9
USP46-206ENST00000506707 Q6Q795 121 aa3.19□□□□□ -1.9
USP46-206ENST00000506707 LIMD2Q9BT23 127 aa3.19□□□□□ -1.9
USP46-206ENST00000506707 A0A1W2PNM2 257 aa3.18□□□□□ -1.9
USP46-206ENST00000506707 COL5A1-AS1Q5SY13 56 aa3.18□□□□□ -1.9
USP46-206ENST00000506707 LYRM7Q5U5X0 104 aa3.18□□□□□ -1.9
USP46-206ENST00000506707 TEN1Q86WV5 123 aa3.18□□□□□ -1.9
USP46-206ENST00000506707 ANKRD29Q8N6D5 301 aa3.18□□□□□ -1.9
USP46-206ENST00000506707 KRTAP13-3Q3SY46 172 aa3.17□□□□□ -1.9
USP46-206ENST00000506707 ASB16-AS1Q495Z4 193 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms