RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 H3BUT2 72 aa6.09□□□□□ -1.43
NR1I3-222ENST00000506018 FABP2P12104 132 aa6.09□□□□□ -1.43
NR1I3-222ENST00000506018 SPRR1AP35321 89 aa6.09□□□□□ -1.43
NR1I3-222ENST00000506018 TRBV20-1A0A075B6N2 111 aa6.08□□□□□ -1.44
NR1I3-222ENST00000506018 TRIAP1O43715 76 aa6.08□□□□□ -1.44
NR1I3-222ENST00000506018 DHRS4-AS1Q9P1J3 65 aa6.08□□□□□ -1.44
NR1I3-222ENST00000506018 RNF213Q63HN8 5207 aa6.08□□□□□ -1.44
NR1I3-222ENST00000506018 A0A1B0GX51 115 aa6.07□□□□□ -1.44
NR1I3-222ENST00000506018 A0A1W2PPM0 123 aa6.07□□□□□ -1.44
NR1I3-222ENST00000506018 ELOF1P60002 83 aaKnown RBP6.07□□□□□ -1.44
NR1I3-222ENST00000506018 SPAG11AQ6PDA7 123 aa6.07□□□□□ -1.44
NR1I3-222ENST00000506018 A0A0U1RQV1 116 aa6.06□□□□□ -1.44
NR1I3-222ENST00000506018 Q6ZRX8 168 aa6.06□□□□□ -1.44
NR1I3-222ENST00000506018 SPRR4Q96PI1 79 aa6.06□□□□□ -1.44
NR1I3-222ENST00000506018 B5MCH6 92 aa6.06□□□□□ -1.44
NR1I3-222ENST00000506018 KRTAP4-16G5E9R7 235 aaPredicted RBP6.06□□□□□ -1.44
NR1I3-222ENST00000506018 DNAL4O96015 105 aa6.06□□□□□ -1.44
NR1I3-222ENST00000506018 ATXN8Q156A1 80 aa6.06□□□□□ -1.44
NR1I3-222ENST00000506018 hADV29S1A0JD25 119 aa6.05□□□□□ -1.44
NR1I3-222ENST00000506018 LINC00575Q6W349 94 aa6.05□□□□□ -1.44
NR1I3-222ENST00000506018 NAA38Q9BRA0 125 aaKnown RBP6.05□□□□□ -1.44
NR1I3-222ENST00000506018 H3BQ85 93 aa6.04□□□□□ -1.44
NR1I3-222ENST00000506018 GTF2H5Q6ZYL4 71 aa6.04□□□□□ -1.44
NR1I3-222ENST00000506018 C3orf22Q8N5N4 141 aa6.04□□□□□ -1.44
NR1I3-222ENST00000506018 SMCR5Q8TEV8 140 aa6.04□□□□□ -1.44
NR1I3-222ENST00000506018 RETNLBQ9BQ08 111 aa6.04□□□□□ -1.44
NR1I3-222ENST00000506018 IGLV7-46A0A075B6I9 117 aa6.03□□□□□ -1.44
NR1I3-222ENST00000506018 TRACP01848 142 aa6.03□□□□□ -1.44
NR1I3-222ENST00000506018 C21orf62-AS1Q17RA5 79 aa6.03□□□□□ -1.44
NR1I3-222ENST00000506018 OCIAD2Q56VL3 154 aa6.03□□□□□ -1.44
NR1I3-222ENST00000506018 LCE3BQ5TA77 95 aa6.03□□□□□ -1.44
NR1I3-222ENST00000506018 SPCS1Q9Y6A9 102 aa6.03□□□□□ -1.44
NR1I3-222ENST00000506018 LST1O00453 97 aa6.02□□□□□ -1.45
NR1I3-222ENST00000506018 TPRXLQ17RH7 258 aa6.02□□□□□ -1.45
NR1I3-222ENST00000506018 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.02□□□□□ -1.45
NR1I3-222ENST00000506018 CLEC2BQ92478 149 aa6.02□□□□□ -1.45
NR1I3-222ENST00000506018 TCL1BO95988 128 aa6.01□□□□□ -1.45
NR1I3-222ENST00000506018 GAGE2AQ6NT46 116 aa6□□□□□ -1.45
NR1I3-222ENST00000506018 Q8NBF4 154 aa6□□□□□ -1.45
NR1I3-222ENST00000506018 A0A1B0GV90 55 aa5.99□□□□□ -1.45
NR1I3-222ENST00000506018 K7EP34 96 aa5.99□□□□□ -1.45
NR1I3-222ENST00000506018 SPINK1P00995 79 aa5.99□□□□□ -1.45
NR1I3-222ENST00000506018 LINC00483Q53H64 154 aa5.99□□□□□ -1.45
NR1I3-222ENST00000506018 FP248Q71RG6 208 aaPredicted RBP5.99□□□□□ -1.45
NR1I3-222ENST00000506018 PPDPFLQ8WWR9 84 aa5.99□□□□□ -1.45
NR1I3-222ENST00000506018 FAM218AQ96MZ4 157 aa5.99□□□□□ -1.45
NR1I3-222ENST00000506018 Q9BRP9 147 aa5.99□□□□□ -1.45
NR1I3-222ENST00000506018 ORMDL1Q9P0S3 153 aa5.99□□□□□ -1.45
NR1I3-222ENST00000506018 IGLV9-49A0A0B4J1Y8 123 aa5.97□□□□□ -1.45
NR1I3-222ENST00000506018 TMEM256-PLSCR3K7ERE1 68 aa5.97□□□□□ -1.45
NR1I3-222ENST00000506018 Q6ZQY7 126 aa5.97□□□□□ -1.45
NR1I3-222ENST00000506018 SSBP3-AS1Q7Z2R9 100 aa5.97□□□□□ -1.45
NR1I3-222ENST00000506018 H3BMG7 143 aa5.96□□□□□ -1.45
NR1I3-222ENST00000506018 TEX49A0A1B0GTD5 131 aa5.95□□□□□ -1.46
NR1I3-222ENST00000506018 C9JAW5 83 aa5.95□□□□□ -1.46
NR1I3-222ENST00000506018 MOBPQ13875 183 aa5.95□□□□□ -1.46
NR1I3-222ENST00000506018 H3BT86 120 aa5.94□□□□□ -1.46
NR1I3-222ENST00000506018 BAALC-AS2P0C853 105 aa5.94□□□□□ -1.46
NR1I3-222ENST00000506018 RPS29P62273 56 aaKnown RBP5.94□□□□□ -1.46
NR1I3-222ENST00000506018 DEFB105AQ8NG35 78 aa5.94□□□□□ -1.46
NR1I3-222ENST00000506018 IGLV5-48A0A075B6I7 105 aa5.93□□□□□ -1.46
NR1I3-222ENST00000506018 F8W1H4 67 aa5.93□□□□□ -1.46
NR1I3-222ENST00000506018 ERC2-IT1O76042 136 aa5.93□□□□□ -1.46
NR1I3-222ENST00000506018 UBE2V1Q13404 147 aa5.93□□□□□ -1.46
NR1I3-222ENST00000506018 C9orf153Q5TBE3 101 aa5.93□□□□□ -1.46
NR1I3-222ENST00000506018 LAMTOR3Q9UHA4 124 aa5.93□□□□□ -1.46
NR1I3-222ENST00000506018 F8WEM9 126 aa5.92□□□□□ -1.46
NR1I3-222ENST00000506018 SPRR1BP22528 89 aa5.92□□□□□ -1.46
NR1I3-222ENST00000506018 ANKRD29Q8N6D5 301 aa5.92□□□□□ -1.46
NR1I3-222ENST00000506018 ST20-AS1Q8NBB2 130 aa5.91□□□□□ -1.46
NR1I3-222ENST00000506018 JMJD7-PLA2G4BH0Y9G9 81 aa5.9□□□□□ -1.47
NR1I3-222ENST00000506018 Q8N377 158 aa5.9□□□□□ -1.47
NR1I3-222ENST00000506018 MUC2Q02817 5179 aa5.89□□□□□ -1.47
NR1I3-222ENST00000506018 NDUFV3P56181 108 aaKnown RBP5.89□□□□□ -1.47
NR1I3-222ENST00000506018 LINC01547P58512 204 aaPredicted RBP5.88□□□□□ -1.47
NR1I3-222ENST00000506018 KRTAP13-3Q3SY46 172 aa5.88□□□□□ -1.47
NR1I3-222ENST00000506018 KRTAP9-9Q9BYP9 154 aa5.88□□□□□ -1.47
NR1I3-222ENST00000506018 KRTAP9-4Q9BYQ2 154 aa5.88□□□□□ -1.47
NR1I3-222ENST00000506018 LIMD2Q9BT23 127 aa5.87□□□□□ -1.47
NR1I3-222ENST00000506018 SEC61BP60468 96 aaKnown RBP5.86□□□□□ -1.47
NR1I3-222ENST00000506018 RBM3P98179 157 aaKnown RBP5.86□□□□□ -1.47
NR1I3-222ENST00000506018 MTURNQ8N3F0 131 aa5.86□□□□□ -1.47
NR1I3-222ENST00000506018 PRO0461Q9UI25 63 aa5.86□□□□□ -1.47
NR1I3-222ENST00000506018 PDE6GP18545 87 aa5.85□□□□□ -1.47
NR1I3-222ENST00000506018 Q6JHZ5 121 aa5.85□□□□□ -1.47
NR1I3-222ENST00000506018 DSCR8Q96T75 97 aa5.85□□□□□ -1.47
NR1I3-222ENST00000506018 SMIM29Q86T20 159 aa5.84□□□□□ -1.47
NR1I3-222ENST00000506018 ASB16-AS1Q495Z4 193 aa5.83□□□□□ -1.48
NR1I3-222ENST00000506018 TEN1Q86WV5 123 aa5.83□□□□□ -1.48
NR1I3-222ENST00000506018 MUC17Q685J3 4493 aa5.83□□□□□ -1.48
NR1I3-222ENST00000506018 IGLV8-61A0A075B6I0 122 aa5.82□□□□□ -1.48
NR1I3-222ENST00000506018 ETDBQ3ZM63 59 aa5.81□□□□□ -1.48
NR1I3-222ENST00000506018 HRCT1Q6UXD1 115 aa5.81□□□□□ -1.48
NR1I3-222ENST00000506018 CD164Q04900 197 aa5.8□□□□□ -1.48
NR1I3-222ENST00000506018 OBSCN-AS1Q96MR7 158 aa5.8□□□□□ -1.48
NR1I3-222ENST00000506018 LOC110117498A0A087WWA1 95 aa5.79□□□□□ -1.48
NR1I3-222ENST00000506018 A0A1B0GV72 72 aa5.79□□□□□ -1.48
NR1I3-222ENST00000506018 TRBV7-4A0A0J9YYF1 115 aa5.78□□□□□ -1.48
NR1I3-222ENST00000506018 A0A1B0GW54 56 aa5.78□□□□□ -1.48
NR1I3-222ENST00000506018 J3QR89 54 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms